RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 MATN4O95460 622 aa6.32□□□□□ -1.4
NIFKP3-201ENST00000417799 VTNP04004 478 aa6.32□□□□□ -1.4
NIFKP3-201ENST00000417799 HDCP19113 662 aa6.32□□□□□ -1.4
NIFKP3-201ENST00000417799 CCNE1P24864 410 aa6.32□□□□□ -1.4
NIFKP3-201ENST00000417799 SLC6A4P31645 630 aa6.32□□□□□ -1.4
NIFKP3-201ENST00000417799 HOXD13P35453 343 aa6.32□□□□□ -1.4
NIFKP3-201ENST00000417799 CDK7P50613 346 aa6.32□□□□□ -1.4
NIFKP3-201ENST00000417799 GPC3P51654 580 aa6.32□□□□□ -1.4
NIFKP3-201ENST00000417799 EFNA5P52803 228 aa6.32□□□□□ -1.4
NIFKP3-201ENST00000417799 STX17P56962 302 aa6.32□□□□□ -1.4
NIFKP3-201ENST00000417799 SOX8P57073 446 aa6.32□□□□□ -1.4
NIFKP3-201ENST00000417799 NLRP11P59045 1033 aaKnown RBP6.32□□□□□ -1.4
NIFKP3-201ENST00000417799 PTENP60484 403 aa6.32□□□□□ -1.4
NIFKP3-201ENST00000417799 HHEXQ03014 270 aa6.32□□□□□ -1.4
NIFKP3-201ENST00000417799 CSRP2Q16527 193 aa6.32□□□□□ -1.4
NIFKP3-201ENST00000417799 KNOP1Q1ED39 458 aaKnown RBP6.32□□□□□ -1.4
NIFKP3-201ENST00000417799 L1TD1Q5T7N2 865 aaKnown RBP6.32□□□□□ -1.4
NIFKP3-201ENST00000417799 EMC10Q5UCC4 262 aa6.32□□□□□ -1.4
NIFKP3-201ENST00000417799 CENPPQ6IPU0 288 aa6.32□□□□□ -1.4
NIFKP3-201ENST00000417799 KLHL10Q6JEL2 608 aa6.32□□□□□ -1.4
NIFKP3-201ENST00000417799 RPAINQ86UA6 219 aa6.32□□□□□ -1.4
NIFKP3-201ENST00000417799 SERINC5Q86VE9 423 aa6.32□□□□□ -1.4
NIFKP3-201ENST00000417799 ZNF410Q86VK4 478 aa6.32□□□□□ -1.4
NIFKP3-201ENST00000417799 ZBTB8OSQ8IWT0 167 aa6.32□□□□□ -1.4
NIFKP3-201ENST00000417799 NELFCDQ8IXH7 590 aa6.32□□□□□ -1.4
NIFKP3-201ENST00000417799 AOPEPQ8N6M6 819 aa6.32□□□□□ -1.4
NIFKP3-201ENST00000417799 OR52N2Q8NGI0 321 aa6.32□□□□□ -1.4
NIFKP3-201ENST00000417799 DEPTORQ8TB45 409 aa6.32□□□□□ -1.4
NIFKP3-201ENST00000417799 NELFBQ8WX92 580 aa6.32□□□□□ -1.4
NIFKP3-201ENST00000417799 P2RX5Q93086 422 aa6.32□□□□□ -1.4
NIFKP3-201ENST00000417799 MIEF2Q96C03 454 aa6.32□□□□□ -1.4
NIFKP3-201ENST00000417799 HVCN1Q96D96 273 aa6.32□□□□□ -1.4
NIFKP3-201ENST00000417799 MRGPRX1Q96LB2 322 aa6.32□□□□□ -1.4
NIFKP3-201ENST00000417799 ACCSQ96QU6 501 aa6.32□□□□□ -1.4
NIFKP3-201ENST00000417799 MED15Q96RN5 788 aa6.32□□□□□ -1.4
NIFKP3-201ENST00000417799 CTAGE1Q96RT6 745 aa6.32□□□□□ -1.4
NIFKP3-201ENST00000417799 KIFC3Q9BVG8 833 aa6.32□□□□□ -1.4
NIFKP3-201ENST00000417799 NFKBIZQ9BYH8 718 aa6.32□□□□□ -1.4
NIFKP3-201ENST00000417799 CPEB1Q9BZB8 566 aaKnown RBP6.32□□□□□ -1.4
NIFKP3-201ENST00000417799 TRPV6Q9H1D0 765 aa6.32□□□□□ -1.4
NIFKP3-201ENST00000417799 C2orf40Q9H1Z8 148 aa6.32□□□□□ -1.4
NIFKP3-201ENST00000417799 TMEM206Q9H813 350 aa6.32□□□□□ -1.4
NIFKP3-201ENST00000417799 KIAA1586Q9HCI6 787 aa6.32□□□□□ -1.4
NIFKP3-201ENST00000417799 TRMT13Q9NUP7 481 aaKnown RBP6.32□□□□□ -1.4
NIFKP3-201ENST00000417799 CFAP97Q9P2B7 532 aa6.32□□□□□ -1.4
NIFKP3-201ENST00000417799 RWDD2AQ9UIY3 292 aa6.32□□□□□ -1.4
NIFKP3-201ENST00000417799 TBX20Q9UMR3 447 aa6.32□□□□□ -1.4
NIFKP3-201ENST00000417799 EXOC7Q9UPT5 735 aa6.32□□□□□ -1.4
NIFKP3-201ENST00000417799 ARID2Q68CP9 1835 aa6.32□□□□□ -1.4
NIFKP3-201ENST00000417799 KAT6AQ92794 2004 aa6.32□□□□□ -1.4
NIFKP3-201ENST00000417799 PHLPP2Q6ZVD8 1323 aa6.31□□□□□ -1.4
NIFKP3-201ENST00000417799 ADGRA3Q8IWK6 1321 aa6.31□□□□□ -1.4
NIFKP3-201ENST00000417799 A0A087WZ62 844 aa6.31□□□□□ -1.4
NIFKP3-201ENST00000417799 BICDL2A1A5D9 508 aa6.31□□□□□ -1.4
NIFKP3-201ENST00000417799 TRIM49BA6NDI0 452 aa6.31□□□□□ -1.4
NIFKP3-201ENST00000417799 PRSS29PA6NIE9 313 aa6.31□□□□□ -1.4
NIFKP3-201ENST00000417799 SMTNL1A8MU46 457 aa6.31□□□□□ -1.4
NIFKP3-201ENST00000417799 BECN2A8MW95 431 aa6.31□□□□□ -1.4
NIFKP3-201ENST00000417799 K7ERI5 159 aa6.31□□□□□ -1.4
NIFKP3-201ENST00000417799 M0QZ92 97 aa6.31□□□□□ -1.4
NIFKP3-201ENST00000417799 MYO1FO00160 1098 aa6.31□□□□□ -1.4
NIFKP3-201ENST00000417799 PDXKO00764 312 aa6.31□□□□□ -1.4
NIFKP3-201ENST00000417799 IKBKBO14920 756 aa6.31□□□□□ -1.4
NIFKP3-201ENST00000417799 HK1P19367 917 aa6.31□□□□□ -1.4
NIFKP3-201ENST00000417799 MGAT1P26572 445 aa6.31□□□□□ -1.4
NIFKP3-201ENST00000417799 KCNJ5P48544 419 aa6.31□□□□□ -1.4
NIFKP3-201ENST00000417799 SNRPFP62306 86 aaKnown RBP6.31□□□□□ -1.4
NIFKP3-201ENST00000417799 NOMO3P69849 1222 aa6.31□□□□□ -1.4
NIFKP3-201ENST00000417799 MRPS6P82932 125 aaKnown RBP6.31□□□□□ -1.4
NIFKP3-201ENST00000417799 MYL5Q02045 173 aa6.31□□□□□ -1.4
NIFKP3-201ENST00000417799 MBTD1Q05BQ5 628 aa6.31□□□□□ -1.4
NIFKP3-201ENST00000417799 LRRC63Q05C16 580 aa6.31□□□□□ -1.4
NIFKP3-201ENST00000417799 IQCB1Q15051 598 aa6.31□□□□□ -1.4
NIFKP3-201ENST00000417799 MAPK6Q16659 721 aa6.31□□□□□ -1.4
NIFKP3-201ENST00000417799 ANKRD40Q6AI12 368 aa6.31□□□□□ -1.4
NIFKP3-201ENST00000417799 DRICH1Q6PGQ1 229 aaPredicted RBP6.31□□□□□ -1.4
NIFKP3-201ENST00000417799 FOXR2Q6PJQ5 311 aa6.31□□□□□ -1.4
NIFKP3-201ENST00000417799 SLC39A5Q6ZMH5 540 aa6.31□□□□□ -1.4
NIFKP3-201ENST00000417799 ZNF365Q70YC5 407 aa6.31□□□□□ -1.4
NIFKP3-201ENST00000417799 DHX40Q8IX18 779 aaKnown RBP6.31□□□□□ -1.4
NIFKP3-201ENST00000417799 GSPT2Q8IYD1 628 aaKnown RBP6.31□□□□□ -1.4
NIFKP3-201ENST00000417799 SYCP3Q8IZU3 236 aa6.31□□□□□ -1.4
NIFKP3-201ENST00000417799 FITM2Q8N6M3 262 aa6.31□□□□□ -1.4
NIFKP3-201ENST00000417799 ATXN2LQ8WWM7 1075 aaKnown RBP6.31□□□□□ -1.4
NIFKP3-201ENST00000417799 ZNF668Q96K58 619 aaPredicted RBP6.31□□□□□ -1.4
NIFKP3-201ENST00000417799 TNIP3Q96KP6 325 aa6.31□□□□□ -1.4
NIFKP3-201ENST00000417799 NLRP4Q96MN2 994 aa6.31□□□□□ -1.4
NIFKP3-201ENST00000417799 SCLT1Q96NL6 688 aa6.31□□□□□ -1.4
NIFKP3-201ENST00000417799 TSG101Q99816 390 aa6.31□□□□□ -1.4
NIFKP3-201ENST00000417799 ELAC2Q9BQ52 826 aaKnown RBP6.31□□□□□ -1.4
NIFKP3-201ENST00000417799 SSBP3Q9BWW4 388 aaPredicted RBP6.31□□□□□ -1.4
NIFKP3-201ENST00000417799 GCOM2Q9BZD3 368 aaPredicted RBP6.31□□□□□ -1.4
NIFKP3-201ENST00000417799 BTBD1Q9H0C5 482 aa6.31□□□□□ -1.4
NIFKP3-201ENST00000417799 FZD8Q9H461 694 aa6.31□□□□□ -1.4
NIFKP3-201ENST00000417799 MINDY3Q9H8M7 445 aa6.31□□□□□ -1.4
NIFKP3-201ENST00000417799 KLHL11Q9NVR0 708 aa6.31□□□□□ -1.4
NIFKP3-201ENST00000417799 RLIMQ9NVW2 624 aa6.31□□□□□ -1.4
NIFKP3-201ENST00000417799 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.31□□□□□ -1.4
NIFKP3-201ENST00000417799 CGNQ9P2M7 1197 aaKnown RBP6.31□□□□□ -1.4
NIFKP3-201ENST00000417799 TRAF3IP3Q9Y228 551 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms