RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 KIAA0895LQ68EN5 471 aa21.04■□□□□ 0.96
PTPRU-203ENST00000415600 ZNF662Q6ZS27 426 aa21.04■□□□□ 0.96
PTPRU-203ENST00000415600 APCDD1Q8J025 514 aa21.04■□□□□ 0.96
PTPRU-203ENST00000415600 BIRC7Q96CA5 298 aa21.04■□□□□ 0.96
PTPRU-203ENST00000415600 ADAM33Q9BZ11 813 aa21.04■□□□□ 0.96
PTPRU-203ENST00000415600 AIPL1Q9NZN9 384 aa21.04■□□□□ 0.96
PTPRU-203ENST00000415600 VANGL2Q9ULK5 521 aa21.04■□□□□ 0.96
PTPRU-203ENST00000415600 PCDHGB2Q9Y5G2 931 aa21.04■□□□□ 0.96
PTPRU-203ENST00000415600 FHOD1Q9Y613 1164 aa21.04■□□□□ 0.96
PTPRU-203ENST00000415600 FAM47DPA6NHR8 397 aa21.03■□□□□ 0.96
PTPRU-203ENST00000415600 MID1O15344 667 aa21.03■□□□□ 0.96
PTPRU-203ENST00000415600 SH3BP5O60239 455 aa21.03■□□□□ 0.96
PTPRU-203ENST00000415600 SLC8A1P32418 973 aa21.03■□□□□ 0.96
PTPRU-203ENST00000415600 CTSOP43234 321 aaPredicted RBP21.03■□□□□ 0.96
PTPRU-203ENST00000415600 GABRB2P47870 512 aa21.03■□□□□ 0.96
PTPRU-203ENST00000415600 SULT1E1P49888 294 aa21.03■□□□□ 0.96
PTPRU-203ENST00000415600 VASPP50552 380 aaPredicted RBP21.03■□□□□ 0.96
PTPRU-203ENST00000415600 CDH4P55283 916 aa21.03■□□□□ 0.96
PTPRU-203ENST00000415600 RNASE9P60153 205 aaKnown RBP21.03■□□□□ 0.96
PTPRU-203ENST00000415600 HLA-BQ31612 363 aa21.03■□□□□ 0.96
PTPRU-203ENST00000415600 FAM102AQ5T9C2 384 aaPredicted RBP21.03■□□□□ 0.96
PTPRU-203ENST00000415600 FAM46CQ5VWP2 391 aa21.03■□□□□ 0.96
PTPRU-203ENST00000415600 HGSNATQ68CP4 663 aa21.03■□□□□ 0.96
PTPRU-203ENST00000415600 ZNF677Q86XU0 584 aa21.03■□□□□ 0.96
PTPRU-203ENST00000415600 OR2T34Q8NGX1 318 aa21.03■□□□□ 0.96
PTPRU-203ENST00000415600 C1orf216Q8TAB5 229 aa21.03■□□□□ 0.96
PTPRU-203ENST00000415600 SETD7Q8WTS6 366 aaKnown RBP21.03■□□□□ 0.96
PTPRU-203ENST00000415600 RPL10LQ96L21 214 aaKnown RBP21.03■□□□□ 0.96
PTPRU-203ENST00000415600 CCDC42Q96M95 316 aa21.03■□□□□ 0.96
PTPRU-203ENST00000415600 SPAG5Q96R06 1193 aa21.03■□□□□ 0.96
PTPRU-203ENST00000415600 TM7SF3Q9NS93 570 aa21.03■□□□□ 0.96
PTPRU-203ENST00000415600 ADAMTS1Q9UHI8 967 aa21.03■□□□□ 0.96
PTPRU-203ENST00000415600 SLCO3A1Q9UIG8 710 aa21.03■□□□□ 0.96
PTPRU-203ENST00000415600 VPS28Q9UK41 221 aa21.03■□□□□ 0.96
PTPRU-203ENST00000415600 AJAP1Q9UKB5 411 aaPredicted RBP21.03■□□□□ 0.96
PTPRU-203ENST00000415600 HS3ST4Q9Y661 456 aa21.03■□□□□ 0.96
PTPRU-203ENST00000415600 TMEM8BA6NDV4 472 aa21.02■□□□□ 0.96
PTPRU-203ENST00000415600 DFNA5O60443 496 aa21.02■□□□□ 0.96
PTPRU-203ENST00000415600 PAGE1O75459 146 aa21.02■□□□□ 0.96
PTPRU-203ENST00000415600 IPO7O95373 1038 aaKnown RBP21.02■□□□□ 0.96
PTPRU-203ENST00000415600 LCA5LO95447 670 aa21.02■□□□□ 0.96
PTPRU-203ENST00000415600 IL1BP01584 269 aa21.02■□□□□ 0.96
PTPRU-203ENST00000415600 SERPING1P05155 500 aa21.02■□□□□ 0.96
PTPRU-203ENST00000415600 PLEKP08567 350 aaPredicted RBP21.02■□□□□ 0.96
PTPRU-203ENST00000415600 PNMA6AP0CW24 399 aaPredicted RBP21.02■□□□□ 0.96
PTPRU-203ENST00000415600 GOT1P17174 413 aa21.02■□□□□ 0.96
PTPRU-203ENST00000415600 PSMD8P48556 350 aa21.02■□□□□ 0.96
PTPRU-203ENST00000415600 CSNK1EP49674 416 aaKnown RBP21.02■□□□□ 0.96
PTPRU-203ENST00000415600 C21orf59P57076 290 aa21.02■□□□□ 0.96
PTPRU-203ENST00000415600 DEUP1Q05D60 604 aa21.02■□□□□ 0.96
PTPRU-203ENST00000415600 MYRIPQ8NFW9 859 aa21.02■□□□□ 0.96
PTPRU-203ENST00000415600 PGAP3Q96FM1 320 aaPredicted RBP21.02■□□□□ 0.96
PTPRU-203ENST00000415600 CCDC114Q96M63 670 aa21.02■□□□□ 0.96
PTPRU-203ENST00000415600 SCNM1Q9BWG6 230 aa21.02■□□□□ 0.96
PTPRU-203ENST00000415600 SIK2Q9H0K1 926 aa21.02■□□□□ 0.96
PTPRU-203ENST00000415600 MTG2Q9H4K7 406 aa21.02■□□□□ 0.96
PTPRU-203ENST00000415600 TM9SF3Q9HD45 589 aa21.02■□□□□ 0.96
PTPRU-203ENST00000415600 APOBEC2Q9Y235 224 aaKnown RBP21.02■□□□□ 0.96
PTPRU-203ENST00000415600 FARP1Q9Y4F1 1045 aaPredicted RBP21.02■□□□□ 0.96
PTPRU-203ENST00000415600 NEUROG3Q9Y4Z2 214 aa21.02■□□□□ 0.96
PTPRU-203ENST00000415600 A0A1B0GVT2 93 aa21.02■□□□□ 0.95
PTPRU-203ENST00000415600 A0A1W2PP55 124 aa21.02■□□□□ 0.95
PTPRU-203ENST00000415600 PROS1P07225 676 aa21.02■□□□□ 0.95
PTPRU-203ENST00000415600 EIF4A3P38919 411 aaKnown RBP21.02■□□□□ 0.95
PTPRU-203ENST00000415600 ARHGAP25P42331 645 aa21.02■□□□□ 0.95
PTPRU-203ENST00000415600 RACK1P63244 317 aaKnown RBP21.02■□□□□ 0.95
PTPRU-203ENST00000415600 INAVAQ3KP66 663 aa21.02■□□□□ 0.95
PTPRU-203ENST00000415600 SLC25A52Q3SY17 297 aa21.02■□□□□ 0.95
PTPRU-203ENST00000415600 ACCSLQ4AC99 568 aa21.02■□□□□ 0.95
PTPRU-203ENST00000415600 TAF3Q5VWG9 929 aa21.02■□□□□ 0.95
PTPRU-203ENST00000415600 UNQ6494/PRO21346Q6UXR6 183 aa21.02■□□□□ 0.95
PTPRU-203ENST00000415600 CIR1Q86X95 450 aaPredicted RBP21.02■□□□□ 0.95
PTPRU-203ENST00000415600 OR8D1Q8WZ84 308 aa21.02■□□□□ 0.95
PTPRU-203ENST00000415600 NPY6RQ99463 290 aa21.02■□□□□ 0.95
PTPRU-203ENST00000415600 CDC6Q99741 560 aa21.02■□□□□ 0.95
PTPRU-203ENST00000415600 FEM1AQ9BSK4 669 aa21.02■□□□□ 0.95
PTPRU-203ENST00000415600 C2orf49Q9BVC5 232 aaPredicted RBP21.02■□□□□ 0.95
PTPRU-203ENST00000415600 ACE2Q9BYF1 805 aaPredicted RBP21.02■□□□□ 0.95
PTPRU-203ENST00000415600 TKTL2Q9H0I9 626 aa21.02■□□□□ 0.95
PTPRU-203ENST00000415600 MUC3BQ9H195 1237 aa21.02■□□□□ 0.95
PTPRU-203ENST00000415600 LZTFL1Q9NQ48 299 aa21.02■□□□□ 0.95
PTPRU-203ENST00000415600 A0A0U1RQJ8 604 aa21.01■□□□□ 0.95
PTPRU-203ENST00000415600 F8VZ95 297 aa21.01■□□□□ 0.95
PTPRU-203ENST00000415600 FLRT2O43155 660 aa21.01■□□□□ 0.95
PTPRU-203ENST00000415600 CXCR3P49682 368 aa21.01■□□□□ 0.95
PTPRU-203ENST00000415600 GALCP54803 685 aa21.01■□□□□ 0.95
PTPRU-203ENST00000415600 JAM2P57087 298 aa21.01■□□□□ 0.95
PTPRU-203ENST00000415600 CCDC15Q0P6D6 951 aa21.01■□□□□ 0.95
PTPRU-203ENST00000415600 ASIC2Q16515 512 aa21.01■□□□□ 0.95
PTPRU-203ENST00000415600 ASTE1Q2TB18 679 aaPredicted RBP21.01■□□□□ 0.95
PTPRU-203ENST00000415600 STK40Q8N2I9 435 aa21.01■□□□□ 0.95
PTPRU-203ENST00000415600 PTPRN2Q92932 1015 aa21.01■□□□□ 0.95
PTPRU-203ENST00000415600 NEUROG2Q9H2A3 272 aa21.01■□□□□ 0.95
PTPRU-203ENST00000415600 HAUS4Q9H6D7 363 aa21.01■□□□□ 0.95
PTPRU-203ENST00000415600 PIGVQ9NUD9 493 aa21.01■□□□□ 0.95
PTPRU-203ENST00000415600 ARHGEF38Q9NXL2 777 aa21.01■□□□□ 0.95
PTPRU-203ENST00000415600 DNAI1Q9UI46 699 aa21.01■□□□□ 0.95
PTPRU-203ENST00000415600 ANKRD6Q9Y2G4 727 aa21.01■□□□□ 0.95
PTPRU-203ENST00000415600 NUMA1Q14980 2115 aa21■□□□□ 0.95
PTPRU-203ENST00000415600 C1QTNF3-AMACRE9PGA6 284 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms