RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 TDRD5Q8NAT2 981 aaKnown RBP9.99□□□□□ -0.81
CD44-206ENST00000415148 CATSPER1Q8NEC5 780 aa9.99□□□□□ -0.81
CD44-206ENST00000415148 FAM81AQ8TBF8 368 aa9.99□□□□□ -0.81
CD44-206ENST00000415148 URGCPQ8TCY9 931 aa9.99□□□□□ -0.81
CD44-206ENST00000415148 KBTBD7Q8WVZ9 684 aa9.99□□□□□ -0.81
CD44-206ENST00000415148 KCTD13Q8WZ19 329 aa9.99□□□□□ -0.81
CD44-206ENST00000415148 TNIP3Q96KP6 325 aa9.99□□□□□ -0.81
CD44-206ENST00000415148 ZNF560Q96MR9 790 aa9.99□□□□□ -0.81
CD44-206ENST00000415148 OR52B2Q96RD2 323 aa9.99□□□□□ -0.81
CD44-206ENST00000415148 PPP1R16BQ96T49 567 aa9.99□□□□□ -0.81
CD44-206ENST00000415148 C16orf70Q9BSU1 422 aa9.99□□□□□ -0.81
CD44-206ENST00000415148 MCMBPQ9BTE3 642 aa9.99□□□□□ -0.81
CD44-206ENST00000415148 CXCL16Q9H2A7 254 aa9.99□□□□□ -0.81
CD44-206ENST00000415148 Q9H521 79 aa9.99□□□□□ -0.81
CD44-206ENST00000415148 NMRAL1Q9HBL8 299 aa9.99□□□□□ -0.81
CD44-206ENST00000415148 TXNRD2Q9NNW7 524 aa9.99□□□□□ -0.81
CD44-206ENST00000415148 TCF7L2Q9NQB0 619 aa9.99□□□□□ -0.81
CD44-206ENST00000415148 OXSMQ9NWU1 459 aa9.99□□□□□ -0.81
CD44-206ENST00000415148 VTI1BQ9UEU0 232 aa9.99□□□□□ -0.81
CD44-206ENST00000415148 TRHDEQ9UKU6 1024 aa9.99□□□□□ -0.81
CD44-206ENST00000415148 RAP2CQ9Y3L5 183 aa9.99□□□□□ -0.81
CD44-206ENST00000415148 GOLGA8QA0A0J9YX86 632 aa9.98□□□□□ -0.81
CD44-206ENST00000415148 GOLGA8OA6NCC3 632 aa9.98□□□□□ -0.81
CD44-206ENST00000415148 GOLGA8NF8WBI6 632 aa9.98□□□□□ -0.81
CD44-206ENST00000415148 MATN2O00339 956 aa9.98□□□□□ -0.81
CD44-206ENST00000415148 DCLK1O15075 740 aa9.98□□□□□ -0.81
CD44-206ENST00000415148 HNRNPRO43390 633 aaKnown RBP9.98□□□□□ -0.81
CD44-206ENST00000415148 XPOTO43592 962 aaKnown RBP9.98□□□□□ -0.81
CD44-206ENST00000415148 HCRTO43612 131 aa9.98□□□□□ -0.81
CD44-206ENST00000415148 DNAJA2O60884 412 aa9.98□□□□□ -0.81
CD44-206ENST00000415148 FBXO21O94952 628 aa9.98□□□□□ -0.81
CD44-206ENST00000415148 PCSK6P29122 969 aa9.98□□□□□ -0.81
CD44-206ENST00000415148 PMLP29590 882 aa9.98□□□□□ -0.81
CD44-206ENST00000415148 HOXA11P31270 313 aaPredicted RBP9.98□□□□□ -0.81
CD44-206ENST00000415148 POLD2P49005 469 aa9.98□□□□□ -0.81
CD44-206ENST00000415148 CSRP3P50461 194 aa9.98□□□□□ -0.81
CD44-206ENST00000415148 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.98□□□□□ -0.81
CD44-206ENST00000415148 KCTD11Q693B1 232 aa9.98□□□□□ -0.81
CD44-206ENST00000415148 TAPT1Q6NXT6 567 aa9.98□□□□□ -0.81
CD44-206ENST00000415148 ERO1BQ86YB8 467 aa9.98□□□□□ -0.81
CD44-206ENST00000415148 LILRA2Q8N149 483 aa9.98□□□□□ -0.81
CD44-206ENST00000415148 MARVELD2Q8N4S9 558 aa9.98□□□□□ -0.81
CD44-206ENST00000415148 ACVR1CQ8NER5 493 aa9.98□□□□□ -0.81
CD44-206ENST00000415148 OR52K1Q8NGK4 314 aa9.98□□□□□ -0.81
CD44-206ENST00000415148 CNKSR2Q8WXI2 1034 aa9.98□□□□□ -0.81
CD44-206ENST00000415148 DCUN1D1Q96GG9 259 aa9.98□□□□□ -0.81
CD44-206ENST00000415148 PRICKLE1Q96MT3 831 aaPredicted RBP9.98□□□□□ -0.81
CD44-206ENST00000415148 VAT1Q99536 393 aa9.98□□□□□ -0.81
CD44-206ENST00000415148 HNRNPABQ99729 332 aaKnown RBP9.98□□□□□ -0.81
CD44-206ENST00000415148 DUSP16Q9BY84 665 aa9.98□□□□□ -0.81
CD44-206ENST00000415148 DRC3Q9H069 523 aa9.98□□□□□ -0.81
CD44-206ENST00000415148 VTA1Q9NP79 307 aa9.98□□□□□ -0.81
CD44-206ENST00000415148 DDX18Q9NVP1 670 aaKnown RBP9.98□□□□□ -0.81
CD44-206ENST00000415148 SEPT10Q9P0V9 454 aa9.98□□□□□ -0.81
CD44-206ENST00000415148 TUBGCP4Q9UGJ1 667 aa9.98□□□□□ -0.81
CD44-206ENST00000415148 VANGL2Q9ULK5 521 aa9.98□□□□□ -0.81
CD44-206ENST00000415148 PHF24Q9UPV7 400 aa9.98□□□□□ -0.81
CD44-206ENST00000415148 HEMK1Q9Y5R4 338 aaPredicted RBP9.98□□□□□ -0.81
CD44-206ENST00000415148 H3BRB1 525 aa9.97□□□□□ -0.81
CD44-206ENST00000415148 STX16-NPEPL1H3BU86 382 aa9.97□□□□□ -0.81
CD44-206ENST00000415148 EEF2KO00418 725 aaKnown RBP9.97□□□□□ -0.81
CD44-206ENST00000415148 HDAC3O15379 428 aa9.97□□□□□ -0.81
CD44-206ENST00000415148 PSMD3O43242 534 aa9.97□□□□□ -0.81
CD44-206ENST00000415148 CABYRO75952 493 aa9.97□□□□□ -0.81
CD44-206ENST00000415148 ASLP04424 464 aa9.97□□□□□ -0.81
CD44-206ENST00000415148 C2P06681 752 aa9.97□□□□□ -0.81
CD44-206ENST00000415148 PDGFRBP09619 1106 aa9.97□□□□□ -0.81
CD44-206ENST00000415148 COL6A2P12110 1019 aa9.97□□□□□ -0.81
CD44-206ENST00000415148 ATP6V1B1P15313 513 aa9.97□□□□□ -0.81
CD44-206ENST00000415148 PTPN3P26045 913 aa9.97□□□□□ -0.81
CD44-206ENST00000415148 ALDH1A3P47895 512 aa9.97□□□□□ -0.81
CD44-206ENST00000415148 RPL14P50914 215 aaKnown RBP9.97□□□□□ -0.81
CD44-206ENST00000415148 SCNN1BP51168 640 aa9.97□□□□□ -0.81
CD44-206ENST00000415148 ZNF135P52742 658 aaPredicted RBP9.97□□□□□ -0.81
CD44-206ENST00000415148 CDKL1Q00532 357 aa9.97□□□□□ -0.81
CD44-206ENST00000415148 MYBPC1Q00872 1141 aa9.97□□□□□ -0.81
CD44-206ENST00000415148 IRF9Q00978 393 aa9.97□□□□□ -0.81
CD44-206ENST00000415148 PPIDQ08752 370 aaKnown RBP9.97□□□□□ -0.81
CD44-206ENST00000415148 ITGA7Q13683 1181 aa9.97□□□□□ -0.81
CD44-206ENST00000415148 HERC3Q15034 1050 aa9.97□□□□□ -0.81
CD44-206ENST00000415148 DLG2Q15700 870 aa9.97□□□□□ -0.81
CD44-206ENST00000415148 EML3Q32P44 896 aa9.97□□□□□ -0.81
CD44-206ENST00000415148 NADK2Q4G0N4 442 aa9.97□□□□□ -0.81
CD44-206ENST00000415148 DCAF6Q58WW2 860 aa9.97□□□□□ -0.81
CD44-206ENST00000415148 MAMDC4Q6UXC1 1216 aa9.97□□□□□ -0.81
CD44-206ENST00000415148 ARMCX2Q7L311 632 aa9.97□□□□□ -0.81
CD44-206ENST00000415148 TP53INP2Q8IXH6 220 aa9.97□□□□□ -0.81
CD44-206ENST00000415148 PQLC1Q8N2U9 271 aa9.97□□□□□ -0.81
CD44-206ENST00000415148 KYQ8NBH2 561 aa9.97□□□□□ -0.81
CD44-206ENST00000415148 APPL2Q8NEU8 664 aa9.97□□□□□ -0.81
CD44-206ENST00000415148 SLC2A14Q8TDB8 520 aa9.97□□□□□ -0.81
CD44-206ENST00000415148 WNT8BQ93098 351 aa9.97□□□□□ -0.81
CD44-206ENST00000415148 NTAN1Q96AB6 310 aa9.97□□□□□ -0.81
CD44-206ENST00000415148 ZNF669Q96BR6 464 aaPredicted RBP9.97□□□□□ -0.81
CD44-206ENST00000415148 DTNBP1Q96EV8 351 aa9.97□□□□□ -0.81
CD44-206ENST00000415148 LENG8Q96PV6 779 aaPredicted RBP9.97□□□□□ -0.81
CD44-206ENST00000415148 SLC2A13Q96QE2 648 aa9.97□□□□□ -0.81
CD44-206ENST00000415148 GRIP2Q9C0E4 1043 aa9.97□□□□□ -0.81
CD44-206ENST00000415148 IL22Q9GZX6 179 aa9.97□□□□□ -0.81
CD44-206ENST00000415148 TUT1Q9H6E5 874 aaKnown RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms