RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 DCTN3O75935 186 aa9.61□□□□□ -0.87
SNHG3-201ENST00000413987 PGM3O95394 542 aa9.61□□□□□ -0.87
SNHG3-201ENST00000413987 GH1P01241 217 aa9.61□□□□□ -0.87
SNHG3-201ENST00000413987 LGALS2P05162 132 aa9.61□□□□□ -0.87
SNHG3-201ENST00000413987 RPLP1P05386 114 aaKnown RBP9.61□□□□□ -0.87
SNHG3-201ENST00000413987 VHLP40337 213 aa9.61□□□□□ -0.87
SNHG3-201ENST00000413987 RANBP1P43487 201 aa9.61□□□□□ -0.87
SNHG3-201ENST00000413987 PTDSS1P48651 473 aaKnown RBP9.61□□□□□ -0.87
SNHG3-201ENST00000413987 GDF10P55107 478 aa9.61□□□□□ -0.87
SNHG3-201ENST00000413987 POLE2P56282 527 aa9.61□□□□□ -0.87
SNHG3-201ENST00000413987 PEX3P56589 373 aa9.61□□□□□ -0.87
SNHG3-201ENST00000413987 TRPC3Q13507 836 aa9.61□□□□□ -0.87
SNHG3-201ENST00000413987 MTFR1Q15390 333 aa9.61□□□□□ -0.87
SNHG3-201ENST00000413987 DUSP28Q4G0W2 176 aa9.61□□□□□ -0.87
SNHG3-201ENST00000413987 PIK3R6Q5UE93 754 aa9.61□□□□□ -0.87
SNHG3-201ENST00000413987 OR52E8Q6IFG1 317 aa9.61□□□□□ -0.87
SNHG3-201ENST00000413987 PPP1R21Q6ZMI0 780 aa9.61□□□□□ -0.87
SNHG3-201ENST00000413987 PLD6Q8N2A8 252 aaKnown RBP9.61□□□□□ -0.87
SNHG3-201ENST00000413987 RDM1Q8NG50 284 aa9.61□□□□□ -0.87
SNHG3-201ENST00000413987 OR52K1Q8NGK4 314 aa9.61□□□□□ -0.87
SNHG3-201ENST00000413987 FBXO25Q8TCJ0 367 aa9.61□□□□□ -0.87
SNHG3-201ENST00000413987 SOCS4Q8WXH5 440 aa9.61□□□□□ -0.87
SNHG3-201ENST00000413987 FAM136AQ96C01 138 aa9.61□□□□□ -0.87
SNHG3-201ENST00000413987 UQCC2Q9BRT2 126 aa9.61□□□□□ -0.87
SNHG3-201ENST00000413987 CNPPD1Q9BV87 410 aa9.61□□□□□ -0.87
SNHG3-201ENST00000413987 EMC7Q9NPA0 242 aa9.61□□□□□ -0.87
SNHG3-201ENST00000413987 NMRK1Q9NWW6 199 aa9.61□□□□□ -0.87
SNHG3-201ENST00000413987 CARD8Q9Y2G2 431 aa9.61□□□□□ -0.87
SNHG3-201ENST00000413987 ADGRA3Q8IWK6 1321 aa9.61□□□□□ -0.87
SNHG3-201ENST00000413987 MAPK13O15264 365 aa9.6□□□□□ -0.87
SNHG3-201ENST00000413987 SLC16A4O15374 487 aa9.6□□□□□ -0.87
SNHG3-201ENST00000413987 EFCAB14O75071 495 aa9.6□□□□□ -0.87
SNHG3-201ENST00000413987 PIAS2O75928 621 aa9.6□□□□□ -0.87
SNHG3-201ENST00000413987 AFPP02771 609 aaKnown RBP9.6□□□□□ -0.87
SNHG3-201ENST00000413987 GSNP06396 782 aa9.6□□□□□ -0.87
SNHG3-201ENST00000413987 STX2P32856 288 aa9.6□□□□□ -0.87
SNHG3-201ENST00000413987 POLGP54098 1239 aaPredicted RBP9.6□□□□□ -0.87
SNHG3-201ENST00000413987 XKR3Q5GH77 459 aa9.6□□□□□ -0.87
SNHG3-201ENST00000413987 UBXN11Q5T124 520 aa9.6□□□□□ -0.87
SNHG3-201ENST00000413987 UBE2R2Q712K3 238 aaPredicted RBP9.6□□□□□ -0.87
SNHG3-201ENST00000413987 ZNF765Q7L2R6 523 aa9.6□□□□□ -0.87
SNHG3-201ENST00000413987 TLK2Q86UE8 772 aa9.6□□□□□ -0.87
SNHG3-201ENST00000413987 FAM9CQ8IZT9 166 aa9.6□□□□□ -0.87
SNHG3-201ENST00000413987 OR56B2PQ8NGI1 322 aa9.6□□□□□ -0.87
SNHG3-201ENST00000413987 HERVK_113Q902F9 699 aa9.6□□□□□ -0.87
SNHG3-201ENST00000413987 UTP4Q969X6 686 aaKnown RBP9.6□□□□□ -0.87
SNHG3-201ENST00000413987 ACSF2Q96CM8 615 aaPredicted RBP9.6□□□□□ -0.87
SNHG3-201ENST00000413987 TGS1Q96RS0 853 aaKnown RBP9.6□□□□□ -0.87
SNHG3-201ENST00000413987 TSEN34Q9BSV6 310 aaKnown RBP9.6□□□□□ -0.87
SNHG3-201ENST00000413987 TIPINQ9BVW5 301 aa9.6□□□□□ -0.87
SNHG3-201ENST00000413987 UBA2Q9UBT2 640 aaPredicted RBP9.6□□□□□ -0.87
SNHG3-201ENST00000413987 NENFQ9UMX5 172 aa9.6□□□□□ -0.87
SNHG3-201ENST00000413987 TRIM33Q9UPN9 1127 aa9.6□□□□□ -0.87
SNHG3-201ENST00000413987 SNX24Q9Y343 169 aa9.6□□□□□ -0.87
SNHG3-201ENST00000413987 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.6□□□□□ -0.87
SNHG3-201ENST00000413987 GPR25O00155 361 aa9.6□□□□□ -0.87
SNHG3-201ENST00000413987 TRAFD1O14545 582 aaPredicted RBP9.6□□□□□ -0.87
SNHG3-201ENST00000413987 NPC1O15118 1278 aa9.6□□□□□ -0.87
SNHG3-201ENST00000413987 MAGEB3O15480 346 aa9.6□□□□□ -0.87
SNHG3-201ENST00000413987 KDM1AO60341 852 aa9.6□□□□□ -0.87
SNHG3-201ENST00000413987 PHF2O75151 1096 aa9.6□□□□□ -0.87
SNHG3-201ENST00000413987 PGK1P00558 417 aa9.6□□□□□ -0.87
SNHG3-201ENST00000413987 PENKP01210 267 aaPredicted RBP9.6□□□□□ -0.87
SNHG3-201ENST00000413987 MMP3P08254 477 aa9.6□□□□□ -0.87
SNHG3-201ENST00000413987 CCND3P30281 292 aaPredicted RBP9.6□□□□□ -0.87
SNHG3-201ENST00000413987 OCRLQ01968 901 aa9.6□□□□□ -0.87
SNHG3-201ENST00000413987 EMC2Q15006 297 aa9.6□□□□□ -0.87
SNHG3-201ENST00000413987 PFKFB4Q16877 469 aa9.6□□□□□ -0.87
SNHG3-201ENST00000413987 CORO6Q6QEF8 472 aa9.6□□□□□ -0.87
SNHG3-201ENST00000413987 BNIPLQ7Z465 357 aa9.6□□□□□ -0.87
SNHG3-201ENST00000413987 PRPF39Q86UA1 669 aaKnown RBP9.6□□□□□ -0.87
SNHG3-201ENST00000413987 TREML1Q86YW5 311 aa9.6□□□□□ -0.87
SNHG3-201ENST00000413987 CLRN3Q8NCR9 226 aa9.6□□□□□ -0.87
SNHG3-201ENST00000413987 GSTCDQ8NEC7 633 aa9.6□□□□□ -0.87
SNHG3-201ENST00000413987 PPTC7Q8NI37 304 aa9.6□□□□□ -0.87
SNHG3-201ENST00000413987 ZNF333Q96JL9 665 aa9.6□□□□□ -0.87
SNHG3-201ENST00000413987 GBP5Q96PP8 586 aa9.6□□□□□ -0.87
SNHG3-201ENST00000413987 FOXP3Q9BZS1 431 aa9.6□□□□□ -0.87
SNHG3-201ENST00000413987 ADAM19Q9H013 955 aa9.6□□□□□ -0.87
SNHG3-201ENST00000413987 CNTD2Q9H8S5 307 aa9.6□□□□□ -0.87
SNHG3-201ENST00000413987 PIDD1Q9HB75 910 aa9.6□□□□□ -0.87
SNHG3-201ENST00000413987 SEMA3GQ9NS98 782 aa9.6□□□□□ -0.87
SNHG3-201ENST00000413987 NKIRAS1Q9NYS0 192 aa9.6□□□□□ -0.87
SNHG3-201ENST00000413987 TAS2R3Q9NYW6 316 aa9.6□□□□□ -0.87
SNHG3-201ENST00000413987 GRHL1Q9NZI5 618 aa9.6□□□□□ -0.87
SNHG3-201ENST00000413987 PCYOX1Q9UHG3 505 aa9.6□□□□□ -0.87
SNHG3-201ENST00000413987 ATP23Q9Y6H3 246 aa9.6□□□□□ -0.87
SNHG3-201ENST00000413987 USH1CQ9Y6N9 552 aa9.6□□□□□ -0.87
SNHG3-201ENST00000413987 ZMYM2Q9UBW7 1377 aa9.6□□□□□ -0.87
SNHG3-201ENST00000413987 DDX3XO00571 662 aaKnown RBP eCLIP9.59□□□□□ -0.87
SNHG3-201ENST00000413987 ACKR2O00590 384 aa9.59□□□□□ -0.87
SNHG3-201ENST00000413987 CLIC2O15247 247 aa9.59□□□□□ -0.87
SNHG3-201ENST00000413987 SLC34A2O95436 690 aa9.59□□□□□ -0.87
SNHG3-201ENST00000413987 ACSL1P33121 698 aa9.59□□□□□ -0.87
SNHG3-201ENST00000413987 SLCO1A2P46721 670 aa9.59□□□□□ -0.87
SNHG3-201ENST00000413987 FOXK2Q01167 660 aa9.59□□□□□ -0.87
SNHG3-201ENST00000413987 TLE2Q04725 743 aa9.59□□□□□ -0.87
SNHG3-201ENST00000413987 FRG1Q14331 258 aaKnown RBP9.59□□□□□ -0.87
SNHG3-201ENST00000413987 KPNB1Q14974 876 aaKnown RBP9.59□□□□□ -0.87
SNHG3-201ENST00000413987 LRRC14Q15048 493 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms