RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, human

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF1-206	ENST00000413725	KLF8	O95600	359 aa	Predicted RBP	13.46	□□□□□ -0.25
SF1-206	ENST00000413725	ACVRL1	P37023	503 aa		13.46	□□□□□ -0.25
SF1-206	ENST00000413725	NUMB	P49757	651 aa		13.46	□□□□□ -0.25
SF1-206	ENST00000413725	GEMIN4	P57678	1058 aa	Known RBP	13.46	□□□□□ -0.25
SF1-206	ENST00000413725	ZNF234	Q14588	700 aa		13.46	□□□□□ -0.25
SF1-206	ENST00000413725	PAFAH1B3	Q15102	231 aa	Known RBP	13.46	□□□□□ -0.25
SF1-206	ENST00000413725	TAZ	Q16635	292 aa		13.46	□□□□□ -0.25
SF1-206	ENST00000413725	EOGT	Q5NDL2	527 aa		13.46	□□□□□ -0.25
SF1-206	ENST00000413725	EMC10	Q5UCC4	262 aa		13.46	□□□□□ -0.25
SF1-206	ENST00000413725	AFMID	Q63HM1	303 aa		13.46	□□□□□ -0.25
SF1-206	ENST00000413725	KAZN	Q674X7	775 aa		13.46	□□□□□ -0.25
SF1-206	ENST00000413725	NCBP2-AS2	Q69YL0	99 aa		13.46	□□□□□ -0.25
SF1-206	ENST00000413725	SERPINA13P	Q6UXR4	307 aa		13.46	□□□□□ -0.25
SF1-206	ENST00000413725		Q6ZS52	159 aa		13.46	□□□□□ -0.25
SF1-206	ENST00000413725	NPW	Q8N729	165 aa		13.46	□□□□□ -0.25
SF1-206	ENST00000413725	PQLC3	Q8N755	202 aa		13.46	□□□□□ -0.25
SF1-206	ENST00000413725	ALG3	Q92685	438 aa		13.46	□□□□□ -0.25
SF1-206	ENST00000413725	HMCES	Q96FZ2	354 aa		13.46	□□□□□ -0.25
SF1-206	ENST00000413725	CELF6	Q96J87	481 aa	Known RBP	13.46	□□□□□ -0.25
SF1-206	ENST00000413725	PSMB7	Q99436	277 aa		13.46	□□□□□ -0.25
SF1-206	ENST00000413725	ACE2	Q9BYF1	805 aa	Predicted RBP	13.46	□□□□□ -0.25
SF1-206	ENST00000413725	KLC2	Q9H0B6	622 aa		13.46	□□□□□ -0.25
SF1-206	ENST00000413725	ETNK2	Q9NVF9	386 aa		13.46	□□□□□ -0.25
SF1-206	ENST00000413725	THAP10	Q9P2Z0	257 aa	Predicted RBP	13.46	□□□□□ -0.25
SF1-206	ENST00000413725	VPS51	Q9UID3	782 aa		13.46	□□□□□ -0.25
SF1-206	ENST00000413725	SLC8A2	Q9UPR5	921 aa		13.46	□□□□□ -0.25
SF1-206	ENST00000413725	JRKL	Q9Y4A0	524 aa		13.46	□□□□□ -0.25
SF1-206	ENST00000413725	EML5	Q05BV3	1969 aa		13.45	□□□□□ -0.26
SF1-206	ENST00000413725	hCG_1818297	A0A087WSY0	165 aa		13.45	□□□□□ -0.26
SF1-206	ENST00000413725	CXorf51A	A0A1B0GTR3	108 aa		13.45	□□□□□ -0.26
SF1-206	ENST00000413725	PRR33	A8MZF0	331 aa		13.45	□□□□□ -0.26
SF1-206	ENST00000413725	CHURC1-FNTB	B4DL54	471 aa		13.45	□□□□□ -0.26
SF1-206	ENST00000413725	DFFA	O00273	331 aa		13.45	□□□□□ -0.26
SF1-206	ENST00000413725	PI15	O43692	258 aa		13.45	□□□□□ -0.26
SF1-206	ENST00000413725	KDELR3	O43731	214 aa		13.45	□□□□□ -0.26
SF1-206	ENST00000413725	MFSD11	O43934	449 aa		13.45	□□□□□ -0.26
SF1-206	ENST00000413725	SNAP91	O60641	907 aa		13.45	□□□□□ -0.26
SF1-206	ENST00000413725	GPR37L1	O60883	481 aa		13.45	□□□□□ -0.26
SF1-206	ENST00000413725	NTSR1	P30989	418 aa		13.45	□□□□□ -0.26
SF1-206	ENST00000413725	PTPN7	P35236	360 aa		13.45	□□□□□ -0.26
SF1-206	ENST00000413725	CTSO	P43234	321 aa	Predicted RBP	13.45	□□□□□ -0.26
SF1-206	ENST00000413725	SERINC3	Q13530	473 aa		13.45	□□□□□ -0.26
SF1-206	ENST00000413725	TMEM31	Q5JXX7	168 aa		13.45	□□□□□ -0.26
SF1-206	ENST00000413725	SEL1L2	Q5TEA6	688 aa		13.45	□□□□□ -0.26
SF1-206	ENST00000413725	SLC9A4	Q6AI14	798 aa		13.45	□□□□□ -0.26
SF1-206	ENST00000413725	LRRC49	Q8IUZ0	686 aa		13.45	□□□□□ -0.26
SF1-206	ENST00000413725	ARHGAP12	Q8IWW6	846 aa		13.45	□□□□□ -0.26
SF1-206	ENST00000413725	SLC35F6	Q8N357	371 aa		13.45	□□□□□ -0.26
SF1-206	ENST00000413725	SPEM1	Q8N4L4	309 aa		13.45	□□□□□ -0.26
SF1-206	ENST00000413725	ATPAF2	Q8N5M1	289 aa		13.45	□□□□□ -0.26
SF1-206	ENST00000413725	CCDC33	Q8N5R6	958 aa		13.45	□□□□□ -0.26
SF1-206	ENST00000413725	ALLC	Q8N6M5	410 aa		13.45	□□□□□ -0.26
SF1-206	ENST00000413725	IL17RC	Q8NAC3	791 aa		13.45	□□□□□ -0.26
SF1-206	ENST00000413725	KDM1B	Q8NB78	822 aa		13.45	□□□□□ -0.26
SF1-206	ENST00000413725	TXNDC5	Q8NBS9	432 aa	Known RBP	13.45	□□□□□ -0.26
SF1-206	ENST00000413725	OSBPL8	Q9BZF1	889 aa		13.45	□□□□□ -0.26
SF1-206	ENST00000413725	SLC39A8	Q9C0K1	460 aa		13.45	□□□□□ -0.26
SF1-206	ENST00000413725	SP110	Q9HB58	689 aa		13.45	□□□□□ -0.26
SF1-206	ENST00000413725	MMP17	Q9ULZ9	603 aa		13.45	□□□□□ -0.26
SF1-206	ENST00000413725	EFR3B	Q9Y2G0	817 aa		13.45	□□□□□ -0.26
SF1-206	ENST00000413725	MFHAS1	Q9Y4C4	1052 aa		13.45	□□□□□ -0.26
SF1-206	ENST00000413725	RAD54B	Q9Y620	910 aa		13.45	□□□□□ -0.26
SF1-206	ENST00000413725	STON1	Q9Y6Q2	735 aa		13.45	□□□□□ -0.26
SF1-206	ENST00000413725	KCNK3	O14649	394 aa		13.44	□□□□□ -0.26
SF1-206	ENST00000413725	CST8	O60676	142 aa		13.44	□□□□□ -0.26
SF1-206	ENST00000413725	TJP3	O95049	919 aa		13.44	□□□□□ -0.26
SF1-206	ENST00000413725	PYGM	P11217	842 aa		13.44	□□□□□ -0.26
SF1-206	ENST00000413725	CHRM1	P11229	460 aa	Predicted RBP	13.44	□□□□□ -0.26
SF1-206	ENST00000413725	KRT10	P13645	584 aa		13.44	□□□□□ -0.26
SF1-206	ENST00000413725	MX2	P20592	715 aa		13.44	□□□□□ -0.26
SF1-206	ENST00000413725	TGM2	P21980	687 aa		13.44	□□□□□ -0.26
SF1-206	ENST00000413725	GLDC	P23378	1020 aa		13.44	□□□□□ -0.26
SF1-206	ENST00000413725	VASP	P50552	380 aa	Predicted RBP	13.44	□□□□□ -0.26
SF1-206	ENST00000413725	PAPOLA	P51003	745 aa	Known RBP	13.44	□□□□□ -0.26
SF1-206	ENST00000413725	CLCN6	P51797	869 aa		13.44	□□□□□ -0.26
SF1-206	ENST00000413725	DYNLT1	P63172	113 aa		13.44	□□□□□ -0.26
SF1-206	ENST00000413725	SLC20A2	Q08357	652 aa		13.44	□□□□□ -0.26
SF1-206	ENST00000413725	ZNF211	Q13398	564 aa	Predicted RBP	13.44	□□□□□ -0.26
SF1-206	ENST00000413725	STARD3	Q14849	445 aa		13.44	□□□□□ -0.26
SF1-206	ENST00000413725	PTPRN	Q16849	979 aa		13.44	□□□□□ -0.26
SF1-206	ENST00000413725	CCDC181	Q5TID7	509 aa		13.44	□□□□□ -0.26
SF1-206	ENST00000413725	BZW1	Q7L1Q6	419 aa	Known RBP	13.44	□□□□□ -0.26
SF1-206	ENST00000413725	METTL3	Q86U44	580 aa	Known RBP	13.44	□□□□□ -0.26
SF1-206	ENST00000413725	PLD5	Q8N7P1	536 aa		13.44	□□□□□ -0.26
SF1-206	ENST00000413725	TMEM105	Q8N8V8	129 aa		13.44	□□□□□ -0.26
SF1-206	ENST00000413725	ATP11C	Q8NB49	1132 aa		13.44	□□□□□ -0.26
SF1-206	ENST00000413725	RPL10L	Q96L21	214 aa	Known RBP	13.44	□□□□□ -0.26
SF1-206	ENST00000413725	CARD9	Q9H257	536 aa		13.44	□□□□□ -0.26
SF1-206	ENST00000413725	ZDHHC4	Q9NPG8	344 aa		13.44	□□□□□ -0.26
SF1-206	ENST00000413725	C11orf16	Q9NQ32	467 aa		13.44	□□□□□ -0.26
SF1-206	ENST00000413725	SPATA6	Q9NWH7	488 aa	Predicted RBP	13.44	□□□□□ -0.26
SF1-206	ENST00000413725	CACNA2D2	Q9NY47	1150 aa		13.44	□□□□□ -0.26
SF1-206	ENST00000413725	DLGAP2	Q9P1A6	1054 aa		13.44	□□□□□ -0.26
SF1-206	ENST00000413725	HCN2	Q9UL51	889 aa		13.44	□□□□□ -0.26
SF1-206	ENST00000413725	HS3ST2	Q9Y278	367 aa		13.44	□□□□□ -0.26
SF1-206	ENST00000413725	ZKSCAN5	Q9Y2L8	839 aa		13.44	□□□□□ -0.26
SF1-206	ENST00000413725	HEY1	Q9Y5J3	304 aa		13.44	□□□□□ -0.26
SF1-206	ENST00000413725	CEP192	Q8TEP8	1941 aa		13.44	□□□□□ -0.26
SF1-206	ENST00000413725	PLXND1	Q9Y4D7	1925 aa		13.43	□□□□□ -0.26
SF1-206	ENST00000413725	ANTXRL	A6NF34	631 aa		13.43	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms