RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 IGLV3-10A0A075B6K4 115 aa10.43□□□□□ -0.74
NCKIPSD-202ENST00000413374 TBC1D3DA0A087WVF3 549 aa10.43□□□□□ -0.74
NCKIPSD-202ENST00000413374 TBC1D3IA0A087WXS9 549 aa10.43□□□□□ -0.74
NCKIPSD-202ENST00000413374 TBC1D3EA0A087X179 549 aa10.43□□□□□ -0.74
NCKIPSD-202ENST00000413374 TBC1D3KA0A087X1G2 549 aa10.43□□□□□ -0.74
NCKIPSD-202ENST00000413374 ANKRD62A6NC57 917 aa10.43□□□□□ -0.74
NCKIPSD-202ENST00000413374 TBC1D3FA6NER0 549 aaPredicted RBP10.43□□□□□ -0.74
NCKIPSD-202ENST00000413374 TBC1D3LB9A6J9 549 aa10.43□□□□□ -0.74
NCKIPSD-202ENST00000413374 GOLGA6L19H0YKK7 550 aa10.43□□□□□ -0.74
NCKIPSD-202ENST00000413374 SMAD6O43541 496 aaKnown RBP10.43□□□□□ -0.74
NCKIPSD-202ENST00000413374 ATP9BO43861 1147 aa10.43□□□□□ -0.74
NCKIPSD-202ENST00000413374 OPHN1O60890 802 aa10.43□□□□□ -0.74
NCKIPSD-202ENST00000413374 RTN2O75298 545 aa10.43□□□□□ -0.74
NCKIPSD-202ENST00000413374 PLEKP08567 350 aaPredicted RBP10.43□□□□□ -0.74
NCKIPSD-202ENST00000413374 TBC1D3HP0C7X1 549 aa10.43□□□□□ -0.74
NCKIPSD-202ENST00000413374 GOT1P17174 413 aa10.43□□□□□ -0.74
NCKIPSD-202ENST00000413374 HOXD12P35452 270 aa10.43□□□□□ -0.74
NCKIPSD-202ENST00000413374 ACVRL1P37023 503 aa10.43□□□□□ -0.74
NCKIPSD-202ENST00000413374 PTPN9P43378 593 aa10.43□□□□□ -0.74
NCKIPSD-202ENST00000413374 DNA2P51530 1060 aa10.43□□□□□ -0.74
NCKIPSD-202ENST00000413374 OGDHQ02218 1023 aa10.43□□□□□ -0.74
NCKIPSD-202ENST00000413374 C1QBPQ07021 282 aaKnown RBP10.43□□□□□ -0.74
NCKIPSD-202ENST00000413374 KLHL30Q0D2K2 578 aa10.43□□□□□ -0.74
NCKIPSD-202ENST00000413374 GRIK2Q13002 908 aa10.43□□□□□ -0.74
NCKIPSD-202ENST00000413374 ARID5BQ14865 1188 aa10.43□□□□□ -0.74
NCKIPSD-202ENST00000413374 ZSCAN23Q3MJ62 389 aa10.43□□□□□ -0.74
NCKIPSD-202ENST00000413374 C6orf118Q5T5N4 469 aa10.43□□□□□ -0.74
NCKIPSD-202ENST00000413374 KIAA0895LQ68EN5 471 aa10.43□□□□□ -0.74
NCKIPSD-202ENST00000413374 TBC1D3GQ6DHY5 549 aa10.43□□□□□ -0.74
NCKIPSD-202ENST00000413374 TBC1D3CQ6IPX1 549 aa10.43□□□□□ -0.74
NCKIPSD-202ENST00000413374 STRADAQ7RTN6 431 aa10.43□□□□□ -0.74
NCKIPSD-202ENST00000413374 RABEPKQ7Z6M1 372 aa10.43□□□□□ -0.74
NCKIPSD-202ENST00000413374 SETD3Q86TU7 594 aaPredicted RBP10.43□□□□□ -0.74
NCKIPSD-202ENST00000413374 TBC1D3Q8IZP1 549 aaPredicted RBP10.43□□□□□ -0.74
NCKIPSD-202ENST00000413374 SH2D3CQ8N5H7 860 aa10.43□□□□□ -0.74
NCKIPSD-202ENST00000413374 OR8D1Q8WZ84 308 aa10.43□□□□□ -0.74
NCKIPSD-202ENST00000413374 CENPIQ92674 756 aaPredicted RBP10.43□□□□□ -0.74
NCKIPSD-202ENST00000413374 CAMK1GQ96NX5 476 aa10.43□□□□□ -0.74
NCKIPSD-202ENST00000413374 C2orf49Q9BVC5 232 aaPredicted RBP10.43□□□□□ -0.74
NCKIPSD-202ENST00000413374 EBF2Q9HAK2 575 aa10.43□□□□□ -0.74
NCKIPSD-202ENST00000413374 ATP13A1Q9HD20 1204 aa10.43□□□□□ -0.74
NCKIPSD-202ENST00000413374 THADAQ6YHU6 1953 aa10.43□□□□□ -0.74
NCKIPSD-202ENST00000413374 A0A1W2PQC6 194 aa10.42□□□□□ -0.74
NCKIPSD-202ENST00000413374 TCRBV5S1A1TA0A578 114 aa10.42□□□□□ -0.74
NCKIPSD-202ENST00000413374 ILVBLA1L0T0 632 aa10.42□□□□□ -0.74
NCKIPSD-202ENST00000413374 RNF103O00237 685 aa10.42□□□□□ -0.74
NCKIPSD-202ENST00000413374 DDX3XO00571 662 aaKnown RBP eCLIP10.42□□□□□ -0.74
NCKIPSD-202ENST00000413374 CREB3O43889 395 aa10.42□□□□□ -0.74
NCKIPSD-202ENST00000413374 LRIG2O94898 1065 aa10.42□□□□□ -0.74
NCKIPSD-202ENST00000413374 ADH1BP00325 375 aa10.42□□□□□ -0.74
NCKIPSD-202ENST00000413374 FTLP02792 175 aaPredicted RBP10.42□□□□□ -0.74
NCKIPSD-202ENST00000413374 ADRB1P08588 477 aa10.42□□□□□ -0.74
NCKIPSD-202ENST00000413374 C5AR1P21730 350 aa10.42□□□□□ -0.74
NCKIPSD-202ENST00000413374 ZNF143P52747 638 aaPredicted RBP10.42□□□□□ -0.74
NCKIPSD-202ENST00000413374 BNC1Q01954 994 aa10.42□□□□□ -0.74
NCKIPSD-202ENST00000413374 GNA12Q03113 381 aa10.42□□□□□ -0.74
NCKIPSD-202ENST00000413374 SFSWAPQ12872 951 aaKnown RBP10.42□□□□□ -0.74
NCKIPSD-202ENST00000413374 ELAVL3Q14576 367 aaKnown RBP10.42□□□□□ -0.74
NCKIPSD-202ENST00000413374 PRAMEF14Q5SWL7 426 aa10.42□□□□□ -0.74
NCKIPSD-202ENST00000413374 USP30Q70CQ3 517 aa10.42□□□□□ -0.74
NCKIPSD-202ENST00000413374 SLFN11Q7Z7L1 901 aa10.42□□□□□ -0.74
NCKIPSD-202ENST00000413374 ZNF354CQ86Y25 554 aa10.42□□□□□ -0.74
NCKIPSD-202ENST00000413374 NETO2Q8NC67 525 aa10.42□□□□□ -0.74
NCKIPSD-202ENST00000413374 CHST14Q8NCH0 376 aa10.42□□□□□ -0.74
NCKIPSD-202ENST00000413374 PIP4K2CQ8TBX8 421 aa10.42□□□□□ -0.74
NCKIPSD-202ENST00000413374 SYT11Q9BT88 431 aa10.42□□□□□ -0.74
NCKIPSD-202ENST00000413374 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.42□□□□□ -0.74
NCKIPSD-202ENST00000413374 OSBPL2Q9H1P3 480 aa10.42□□□□□ -0.74
NCKIPSD-202ENST00000413374 GAREM1Q9H706 876 aa10.42□□□□□ -0.74
NCKIPSD-202ENST00000413374 TM9SF3Q9HD45 589 aa10.42□□□□□ -0.74
NCKIPSD-202ENST00000413374 TMEM51Q9NW97 253 aa10.42□□□□□ -0.74
NCKIPSD-202ENST00000413374 GPATCH2LQ9NWQ4 482 aa10.42□□□□□ -0.74
NCKIPSD-202ENST00000413374 AIPL1Q9NZN9 384 aa10.42□□□□□ -0.74
NCKIPSD-202ENST00000413374 IFNKQ9P0W0 207 aa10.42□□□□□ -0.74
NCKIPSD-202ENST00000413374 MYO1AQ9UBC5 1043 aa10.42□□□□□ -0.74
NCKIPSD-202ENST00000413374 PPARGC1AQ9UBK2 798 aaKnown RBP10.42□□□□□ -0.74
NCKIPSD-202ENST00000413374 PCSK1NQ9UHG2 260 aa10.42□□□□□ -0.74
NCKIPSD-202ENST00000413374 PPM1HQ9ULR3 514 aa10.42□□□□□ -0.74
NCKIPSD-202ENST00000413374 MYO6Q9UM54 1294 aa10.42□□□□□ -0.74
NCKIPSD-202ENST00000413374 SCML1Q9UN30 329 aa10.42□□□□□ -0.74
NCKIPSD-202ENST00000413374 FCF1Q9Y324 198 aaKnown RBP10.42□□□□□ -0.74
NCKIPSD-202ENST00000413374 SPAARA0A1B0GVQ0 90 aa10.41□□□□□ -0.74
NCKIPSD-202ENST00000413374 LRRC72A6NJI9 287 aa10.41□□□□□ -0.74
NCKIPSD-202ENST00000413374 KPNA3O00505 521 aaPredicted RBP10.41□□□□□ -0.74
NCKIPSD-202ENST00000413374 WNT9AO14904 365 aa10.41□□□□□ -0.74
NCKIPSD-202ENST00000413374 MCF2LO15068 1137 aa10.41□□□□□ -0.74
NCKIPSD-202ENST00000413374 SH3BP5O60239 455 aa10.41□□□□□ -0.74
NCKIPSD-202ENST00000413374 TOP3BO95985 862 aaKnown RBP10.41□□□□□ -0.74
NCKIPSD-202ENST00000413374 IGHV4-34P06331 123 aa10.41□□□□□ -0.74
NCKIPSD-202ENST00000413374 CTSLP07711 333 aa10.41□□□□□ -0.74
NCKIPSD-202ENST00000413374 CD59P13987 128 aa10.41□□□□□ -0.74
NCKIPSD-202ENST00000413374 RHOQP17081 205 aa10.41□□□□□ -0.74
NCKIPSD-202ENST00000413374 PSMA2P25787 234 aa10.41□□□□□ -0.74
NCKIPSD-202ENST00000413374 CD27P26842 260 aa10.41□□□□□ -0.74
NCKIPSD-202ENST00000413374 MAT2AP31153 395 aaKnown RBP10.41□□□□□ -0.74
NCKIPSD-202ENST00000413374 CHRNA3P32297 505 aa10.41□□□□□ -0.74
NCKIPSD-202ENST00000413374 DRD3P35462 400 aa10.41□□□□□ -0.74
NCKIPSD-202ENST00000413374 GSCP56915 257 aaPredicted RBP10.41□□□□□ -0.74
NCKIPSD-202ENST00000413374 FAM193AP78312 1265 aa10.41□□□□□ -0.74
NCKIPSD-202ENST00000413374 CNTN1Q12860 1018 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms