RNA–Protein interactions for RNA: ENST00000413296.1

CBX1P3-201, Transcript of chromobox 1 pseudogene 3, humanhuman

BASIC

Gene CBX1P3, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P3-201ENST00000413296 C5orf34Q96MH7 638 aa6.04□□□□□ -1.44
CBX1P3-201ENST00000413296 INTS14Q96SY0 518 aa6.04□□□□□ -1.44
CBX1P3-201ENST00000413296 MECRQ9BV79 373 aa6.04□□□□□ -1.44
CBX1P3-201ENST00000413296 HERC2P3Q9BVR0 1158 aa6.04□□□□□ -1.44
CBX1P3-201ENST00000413296 CARD6Q9BX69 1037 aa6.04□□□□□ -1.44
CBX1P3-201ENST00000413296 FOXP3Q9BZS1 431 aa6.04□□□□□ -1.44
CBX1P3-201ENST00000413296 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.04□□□□□ -1.44
CBX1P3-201ENST00000413296 SLC25A32Q9H2D1 315 aa6.04□□□□□ -1.44
CBX1P3-201ENST00000413296 LDAHQ9H6V9 325 aa6.04□□□□□ -1.44
CBX1P3-201ENST00000413296 WDR26Q9H7D7 661 aa6.04□□□□□ -1.44
CBX1P3-201ENST00000413296 POLR1BQ9H9Y6 1135 aa6.04□□□□□ -1.44
CBX1P3-201ENST00000413296 SYTL2Q9HCH5 934 aa6.04□□□□□ -1.44
CBX1P3-201ENST00000413296 IARS2Q9NSE4 1012 aaKnown RBP6.04□□□□□ -1.44
CBX1P3-201ENST00000413296 CENPMQ9NSP4 180 aa6.04□□□□□ -1.44
CBX1P3-201ENST00000413296 FAM105AQ9NUU6 356 aa6.04□□□□□ -1.44
CBX1P3-201ENST00000413296 KCNK4Q9NYG8 393 aa6.04□□□□□ -1.44
CBX1P3-201ENST00000413296 BTBD7Q9P203 1132 aa6.04□□□□□ -1.44
CBX1P3-201ENST00000413296 NCDNQ9UBB6 729 aa6.04□□□□□ -1.44
CBX1P3-201ENST00000413296 CDH22Q9UJ99 828 aa6.04□□□□□ -1.44
CBX1P3-201ENST00000413296 DNMT3LQ9UJW3 386 aa6.04□□□□□ -1.44
CBX1P3-201ENST00000413296 PSME2Q9UL46 239 aa6.04□□□□□ -1.44
CBX1P3-201ENST00000413296 NENFQ9UMX5 172 aa6.04□□□□□ -1.44
CBX1P3-201ENST00000413296 SLC8A2Q9UPR5 921 aa6.04□□□□□ -1.44
CBX1P3-201ENST00000413296 V9GYY5 206 aaPredicted RBP6.04□□□□□ -1.44
CBX1P3-201ENST00000413296 ATP10BO94823 1461 aa6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 A0A1W2PQM1 296 aa6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 OOEPA6NGQ2 149 aa6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 FAM90A7PA6NKC0 464 aa6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 FAM90A22PA8MWA6 464 aa6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 FAM90A12PA8MX19 464 aa6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 FAM90A23PA8MXZ1 464 aa6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 TEX22C9J3V5 150 aa6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 EBAG9O00559 213 aa6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 NFIBO00712 420 aa6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 CXCL11O14625 94 aa6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 IFIT3O14879 490 aaKnown RBP6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 ZSCAN9O15535 394 aaPredicted RBP6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 DHHO43323 396 aa6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 BUB1O43683 1085 aa6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 FKTNO75072 461 aa6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 ERLIN1O75477 346 aa6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 RECQL4O94761 1208 aa6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 KCNK5O95279 499 aa6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 PTBP3O95758 552 aaKnown RBP6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 PDGFBP01127 241 aaPredicted RBP6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 URODP06132 367 aa6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 ZFYP08048 801 aaPredicted RBP6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 C1SP09871 688 aa6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 ARP10275 920 aa6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 AGAP20933 346 aa6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 GALP22466 123 aa6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 GLRA2P23416 452 aa6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 PNPLA4P41247 253 aa6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 PTDSS1P48651 473 aaKnown RBP6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 RAB28P51157 221 aa6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 IRAK1P51617 712 aa6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 PMP22Q01453 160 aa6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 DPYSQ14117 519 aa6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 EFTUD2Q15029 972 aaKnown RBP eCLIP6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 NPY5RQ15761 445 aa6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 TBRG1Q3YBR2 411 aa6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 SPDYCQ5MJ68 293 aa6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 SFRP5Q5T4F7 317 aa6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 RIPPLY2Q5TAB7 128 aa6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 KIAA0930Q6ICG6 404 aaPredicted RBP6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 AFTPHQ6ULP2 937 aa6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 ABHD15Q6UXT9 468 aa6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 MED25Q71SY5 747 aa6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 PARS2Q7L3T8 475 aaKnown RBP6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 ARMC9Q7Z3E5 817 aa6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 TRABD2AQ86V40 505 aa6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 P3H2Q8IVL5 708 aa6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 ELMOD2Q8IZ81 293 aa6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 KDM8Q8N371 416 aa6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 ARL14Q8N4G2 192 aa6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 TC2NQ8N9U0 490 aa6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 FAM184AQ8NB25 1140 aa6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 NHLRC2Q8NBF2 726 aa6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 SMG8Q8ND04 991 aaKnown RBP6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 PHOSPHO1Q8TCT1 267 aa6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 CLEC4DQ8WXI8 215 aa6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 MRPL38Q96DV4 380 aaKnown RBP6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 WRNIP1Q96S55 665 aa6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 GAD1Q99259 594 aa6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 NUP85Q9BW27 656 aa6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 FAM83DQ9H4H8 585 aa6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 NRDE2Q9H7Z3 1164 aa6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 SYNPO2LQ9H987 977 aa6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 SUGCTQ9HAC7 445 aa6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 RPRD1BQ9NQG5 326 aaKnown RBP6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 LANCL2Q9NS86 450 aa6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 GDAP2Q9NXN4 497 aa6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 QPCTLQ9NXS2 382 aa6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 TMOD3Q9NYL9 352 aa6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 MYOTQ9UBF9 498 aa6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 ASH2LQ9UBL3 628 aa6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 TRPC4Q9UBN4 977 aa6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 FBXL17Q9UF56 701 aa6.03□□□□□ -1.44
CBX1P3-201ENST00000413296 STX8Q9UNK0 236 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms