RNA–Protein interactions for RNA: ENST00000410457.1

RNU2-28P-201, Transcript of RNA, U2 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU2-28P, Length 189 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-28P-201ENST00000410457 SDF4Q9BRK5 362 aa4.39□□□□□ -1.71
RNU2-28P-201ENST00000410457 CADM1Q9BY67 442 aaKnown RBP4.39□□□□□ -1.71
RNU2-28P-201ENST00000410457 ZNF341Q9BYN7 854 aa4.39□□□□□ -1.71
RNU2-28P-201ENST00000410457 CCDC68Q9H2F9 335 aa4.39□□□□□ -1.71
RNU2-28P-201ENST00000410457 ARL8BQ9NVJ2 186 aa4.39□□□□□ -1.71
RNU2-28P-201ENST00000410457 SLC17A6Q9P2U8 582 aa4.39□□□□□ -1.71
RNU2-28P-201ENST00000410457 UPB1Q9UBR1 384 aa4.39□□□□□ -1.71
RNU2-28P-201ENST00000410457 TTLL3Q9Y4R7 772 aa4.39□□□□□ -1.71
RNU2-28P-201ENST00000410457 PIAS3Q9Y6X2 628 aa4.39□□□□□ -1.71
RNU2-28P-201ENST00000410457 C17orf113A0A1B0GUU1 675 aa4.38□□□□□ -1.71
RNU2-28P-201ENST00000410457 TMEM191CA6NGB0 347 aa4.38□□□□□ -1.71
RNU2-28P-201ENST00000410457 TARM1B6A8C7 271 aa4.38□□□□□ -1.71
RNU2-28P-201ENST00000410457 KCNJ18B7U540 433 aa4.38□□□□□ -1.71
RNU2-28P-201ENST00000410457 MGST3O14880 152 aa4.38□□□□□ -1.71
RNU2-28P-201ENST00000410457 SEC14L2O76054 403 aa4.38□□□□□ -1.71
RNU2-28P-201ENST00000410457 MLYCDO95822 493 aa4.38□□□□□ -1.71
RNU2-28P-201ENST00000410457 CYP2D6P10635 497 aa4.38□□□□□ -1.71
RNU2-28P-201ENST00000410457 HOXD13P35453 343 aa4.38□□□□□ -1.71
RNU2-28P-201ENST00000410457 MLH1P40692 756 aa4.38□□□□□ -1.71
RNU2-28P-201ENST00000410457 RGS2P41220 211 aa4.38□□□□□ -1.71
RNU2-28P-201ENST00000410457 SOX2P48431 317 aa4.38□□□□□ -1.71
RNU2-28P-201ENST00000410457 CACNA2D1P54289 1103 aa4.38□□□□□ -1.71
RNU2-28P-201ENST00000410457 RPS3AP61247 264 aaKnown RBP4.38□□□□□ -1.71
RNU2-28P-201ENST00000410457 RPL7AP62424 266 aaKnown RBP4.38□□□□□ -1.71
RNU2-28P-201ENST00000410457 EFNB1P98172 346 aa4.38□□□□□ -1.71
RNU2-28P-201ENST00000410457 RHAGQ02094 409 aa4.38□□□□□ -1.71
RNU2-28P-201ENST00000410457 DCTN2Q13561 401 aaKnown RBP4.38□□□□□ -1.71
RNU2-28P-201ENST00000410457 PUM1Q14671 1186 aaKnown RBP eCLIP4.38□□□□□ -1.71
RNU2-28P-201ENST00000410457 KPNB1Q14974 876 aaKnown RBP4.38□□□□□ -1.71
RNU2-28P-201ENST00000410457 CC2D1BQ5T0F9 858 aaKnown RBP4.38□□□□□ -1.71
RNU2-28P-201ENST00000410457 C17orf99Q6UX52 265 aa4.38□□□□□ -1.71
RNU2-28P-201ENST00000410457 Q6ZPA2 131 aa4.38□□□□□ -1.71
RNU2-28P-201ENST00000410457 CCDC129Q6ZRS4 1044 aa4.38□□□□□ -1.71
RNU2-28P-201ENST00000410457 RNF144BQ7Z419 303 aa4.38□□□□□ -1.71
RNU2-28P-201ENST00000410457 KLBQ86Z14 1044 aa4.38□□□□□ -1.71
RNU2-28P-201ENST00000410457 RHPN2Q8IUC4 686 aa4.38□□□□□ -1.71
RNU2-28P-201ENST00000410457 UEVLDQ8IX04 471 aa4.38□□□□□ -1.71
RNU2-28P-201ENST00000410457 C16orf71Q8IYS4 520 aaPredicted RBP4.38□□□□□ -1.71
RNU2-28P-201ENST00000410457 FAM47BQ8NA70 645 aa4.38□□□□□ -1.71
RNU2-28P-201ENST00000410457 SETD9Q8NE22 299 aa4.38□□□□□ -1.71
RNU2-28P-201ENST00000410457 NSUN4Q96CB9 384 aaKnown RBP4.38□□□□□ -1.71
RNU2-28P-201ENST00000410457 ERP27Q96DN0 273 aa4.38□□□□□ -1.71
RNU2-28P-201ENST00000410457 FRG2BQ96QU4 278 aa4.38□□□□□ -1.71
RNU2-28P-201ENST00000410457 MPHOSPH8Q99549 860 aa4.38□□□□□ -1.71
RNU2-28P-201ENST00000410457 ZNF747Q9BV97 191 aa4.38□□□□□ -1.71
RNU2-28P-201ENST00000410457 ITPAQ9BY32 194 aa4.38□□□□□ -1.71
RNU2-28P-201ENST00000410457 GHITMQ9H3K2 345 aa4.38□□□□□ -1.71
RNU2-28P-201ENST00000410457 Q9N2J8 555 aa4.38□□□□□ -1.71
RNU2-28P-201ENST00000410457 ARL15Q9NXU5 204 aa4.38□□□□□ -1.71
RNU2-28P-201ENST00000410457 FBXO40Q9UH90 709 aa4.38□□□□□ -1.71
RNU2-28P-201ENST00000410457 CLDN16Q9Y5I7 305 aa4.38□□□□□ -1.71
RNU2-28P-201ENST00000410457 PSAT1Q9Y617 370 aa4.38□□□□□ -1.71
RNU2-28P-201ENST00000410457 OR6C68A6NDL8 312 aa4.37□□□□□ -1.71
RNU2-28P-201ENST00000410457 NPIPB8E9PQR5 432 aa4.37□□□□□ -1.71
RNU2-28P-201ENST00000410457 GTPBP1O00178 669 aaKnown RBP4.37□□□□□ -1.71
RNU2-28P-201ENST00000410457 STRNO43815 780 aa4.37□□□□□ -1.71
RNU2-28P-201ENST00000410457 BLKP51451 505 aa4.37□□□□□ -1.71
RNU2-28P-201ENST00000410457 CCNG2Q16589 344 aa4.37□□□□□ -1.71
RNU2-28P-201ENST00000410457 SLC9B1Q4ZJI4 515 aa4.37□□□□□ -1.71
RNU2-28P-201ENST00000410457 ZNF667Q5HYK9 610 aa4.37□□□□□ -1.71
RNU2-28P-201ENST00000410457 UBAP2Q5T6F2 1119 aaKnown RBP4.37□□□□□ -1.71
RNU2-28P-201ENST00000410457 IGFL4Q6B9Z1 124 aa4.37□□□□□ -1.71
RNU2-28P-201ENST00000410457 TMEM81Q6P7N7 255 aa4.37□□□□□ -1.71
RNU2-28P-201ENST00000410457 KLHL24Q6TFL4 600 aa4.37□□□□□ -1.71
RNU2-28P-201ENST00000410457 DHRS13Q6UX07 377 aa4.37□□□□□ -1.71
RNU2-28P-201ENST00000410457 PRRT2Q7Z6L0 340 aaPredicted RBP4.37□□□□□ -1.71
RNU2-28P-201ENST00000410457 TFAP2DQ7Z6R9 452 aa4.37□□□□□ -1.71
RNU2-28P-201ENST00000410457 CPXM2Q8N436 756 aa4.37□□□□□ -1.71
RNU2-28P-201ENST00000410457 PLD5Q8N7P1 536 aa4.37□□□□□ -1.71
RNU2-28P-201ENST00000410457 PDILTQ8N807 584 aa4.37□□□□□ -1.71
RNU2-28P-201ENST00000410457 SCAIQ8N9R8 606 aa4.37□□□□□ -1.71
RNU2-28P-201ENST00000410457 C11orf65Q8NCR3 313 aa4.37□□□□□ -1.71
RNU2-28P-201ENST00000410457 KCNG4Q8TDN1 519 aa4.37□□□□□ -1.71
RNU2-28P-201ENST00000410457 LARP4BQ92615 738 aaKnown RBP4.37□□□□□ -1.71
RNU2-28P-201ENST00000410457 SARAFQ96BY9 339 aa4.37□□□□□ -1.71
RNU2-28P-201ENST00000410457 KLHL29Q96CT2 875 aa4.37□□□□□ -1.71
RNU2-28P-201ENST00000410457 ADAD1Q96M93 576 aaKnown RBP4.37□□□□□ -1.71
RNU2-28P-201ENST00000410457 LBHD1Q9BQE6 289 aaPredicted RBP4.37□□□□□ -1.71
RNU2-28P-201ENST00000410457 EIF2B3Q9NR50 452 aaKnown RBP4.37□□□□□ -1.71
RNU2-28P-201ENST00000410457 SMYD2Q9NRG4 433 aa4.37□□□□□ -1.71
RNU2-28P-201ENST00000410457 IL1RAPL1Q9NZN1 696 aa4.37□□□□□ -1.71
RNU2-28P-201ENST00000410457 PEMTQ9UBM1 199 aa4.37□□□□□ -1.71
RNU2-28P-201ENST00000410457 VPS28Q9UK41 221 aa4.37□□□□□ -1.71
RNU2-28P-201ENST00000410457 ADAM21Q9UKJ8 722 aa4.37□□□□□ -1.71
RNU2-28P-201ENST00000410457 PACSIN3Q9UKS6 424 aa4.37□□□□□ -1.71
RNU2-28P-201ENST00000410457 LYVE1Q9Y5Y7 322 aa4.37□□□□□ -1.71
RNU2-28P-201ENST00000410457 TEX13CA0A0J9YWL9 993 aa4.36□□□□□ -1.71
RNU2-28P-201ENST00000410457 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.36□□□□□ -1.71
RNU2-28P-201ENST00000410457 RRHO14718 337 aa4.36□□□□□ -1.71
RNU2-28P-201ENST00000410457 TGFB1I1O43294 461 aa4.36□□□□□ -1.71
RNU2-28P-201ENST00000410457 CEP104O60308 925 aa4.36□□□□□ -1.71
RNU2-28P-201ENST00000410457 TMCC2O75069 709 aa4.36□□□□□ -1.71
RNU2-28P-201ENST00000410457 USP12O75317 370 aa4.36□□□□□ -1.71
RNU2-28P-201ENST00000410457 ADRB1P08588 477 aa4.36□□□□□ -1.71
RNU2-28P-201ENST00000410457 GPD1P21695 349 aa4.36□□□□□ -1.71
RNU2-28P-201ENST00000410457 TACR3P29371 465 aa4.36□□□□□ -1.71
RNU2-28P-201ENST00000410457 TM4SF1P30408 202 aa4.36□□□□□ -1.71
RNU2-28P-201ENST00000410457 MAPK4P31152 587 aa4.36□□□□□ -1.71
RNU2-28P-201ENST00000410457 CPOXP36551 454 aa4.36□□□□□ -1.71
RNU2-28P-201ENST00000410457 RAD52P43351 418 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms