RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 TAF1LQ8IZX4 1826 aa8.48□□□□□ -1.05
SNX13-201ENST00000409076 A8MX80 341 aa8.48□□□□□ -1.05
SNX13-201ENST00000409076 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.48□□□□□ -1.05
SNX13-201ENST00000409076 GIPC1O14908 333 aa8.48□□□□□ -1.05
SNX13-201ENST00000409076 AURKAO14965 403 aa8.48□□□□□ -1.05
SNX13-201ENST00000409076 SERPINA6P08185 405 aa8.48□□□□□ -1.05
SNX13-201ENST00000409076 OR4Q2P0C623 313 aa8.48□□□□□ -1.05
SNX13-201ENST00000409076 FGF3P11487 239 aaPredicted RBP8.48□□□□□ -1.05
SNX13-201ENST00000409076 ITGB6P18564 788 aa8.48□□□□□ -1.05
SNX13-201ENST00000409076 ADSLP30566 484 aaPredicted RBP8.48□□□□□ -1.05
SNX13-201ENST00000409076 SPRP35270 261 aaPredicted RBP8.48□□□□□ -1.05
SNX13-201ENST00000409076 GGT5P36269 586 aa8.48□□□□□ -1.05
SNX13-201ENST00000409076 GRIA3P42263 894 aa8.48□□□□□ -1.05
SNX13-201ENST00000409076 SNRPFP62306 86 aaKnown RBP8.48□□□□□ -1.05
SNX13-201ENST00000409076 TTLL4Q14679 1199 aa8.48□□□□□ -1.05
SNX13-201ENST00000409076 C16orf72Q14CZ0 275 aa8.48□□□□□ -1.05
SNX13-201ENST00000409076 OR52E8Q6IFG1 317 aa8.48□□□□□ -1.05
SNX13-201ENST00000409076 FBXL19Q6PCT2 694 aa8.48□□□□□ -1.05
SNX13-201ENST00000409076 CLVS1Q8IUQ0 354 aaPredicted RBP8.48□□□□□ -1.05
SNX13-201ENST00000409076 HSPBAP1Q96EW2 488 aa8.48□□□□□ -1.05
SNX13-201ENST00000409076 VPS39Q96JC1 886 aa8.48□□□□□ -1.05
SNX13-201ENST00000409076 GPR20Q99678 358 aa8.48□□□□□ -1.05
SNX13-201ENST00000409076 ACE2Q9BYF1 805 aaPredicted RBP8.48□□□□□ -1.05
SNX13-201ENST00000409076 C2orf40Q9H1Z8 148 aa8.48□□□□□ -1.05
SNX13-201ENST00000409076 POMKQ9H5K3 350 aa8.48□□□□□ -1.05
SNX13-201ENST00000409076 WARS2Q9UGM6 360 aaKnown RBP8.48□□□□□ -1.05
SNX13-201ENST00000409076 CDYLQ9Y232 598 aa8.48□□□□□ -1.05
SNX13-201ENST00000409076 HMX2A2RU54 273 aa8.48□□□□□ -1.05
SNX13-201ENST00000409076 LRRC14BA6NHZ5 514 aa8.48□□□□□ -1.05
SNX13-201ENST00000409076 E7ENQ6 273 aa8.48□□□□□ -1.05
SNX13-201ENST00000409076 H3BRB1 525 aa8.48□□□□□ -1.05
SNX13-201ENST00000409076 NRP1O14786 923 aa8.48□□□□□ -1.05
SNX13-201ENST00000409076 XPOTO43592 962 aaKnown RBP8.48□□□□□ -1.05
SNX13-201ENST00000409076 NCK1P16333 377 aa8.48□□□□□ -1.05
SNX13-201ENST00000409076 YWHAQP27348 245 aa8.48□□□□□ -1.05
SNX13-201ENST00000409076 LSM3P62310 102 aaKnown RBP8.48□□□□□ -1.05
SNX13-201ENST00000409076 YWHAHQ04917 246 aaPredicted RBP8.48□□□□□ -1.05
SNX13-201ENST00000409076 NADK2Q4G0N4 442 aa8.48□□□□□ -1.05
SNX13-201ENST00000409076 PPP1R2P3Q6NXS1 205 aa8.48□□□□□ -1.05
SNX13-201ENST00000409076 NET1Q7Z628 596 aaPredicted RBP8.48□□□□□ -1.05
SNX13-201ENST00000409076 DSELQ8IZU8 1212 aa8.48□□□□□ -1.05
SNX13-201ENST00000409076 BEST2Q8NFU1 509 aa8.48□□□□□ -1.05
SNX13-201ENST00000409076 CMASQ8NFW8 434 aaPredicted RBP8.48□□□□□ -1.05
SNX13-201ENST00000409076 CXorf38Q8TB03 319 aa8.48□□□□□ -1.05
SNX13-201ENST00000409076 ZNF512Q96ME7 567 aaPredicted RBP8.48□□□□□ -1.05
SNX13-201ENST00000409076 PKP2Q99959 881 aa8.48□□□□□ -1.05
SNX13-201ENST00000409076 PDZD7Q9H5P4 517 aa8.48□□□□□ -1.05
SNX13-201ENST00000409076 TUT1Q9H6E5 874 aaKnown RBP8.48□□□□□ -1.05
SNX13-201ENST00000409076 PDP2Q9P2J9 529 aa8.48□□□□□ -1.05
SNX13-201ENST00000409076 ZDHHC2Q9UIJ5 367 aa8.48□□□□□ -1.05
SNX13-201ENST00000409076 ABCA3Q99758 1704 aa8.48□□□□□ -1.05
SNX13-201ENST00000409076 KPNA7A9QM74 516 aa8.48□□□□□ -1.05
SNX13-201ENST00000409076 MAGEB2O15479 319 aa8.48□□□□□ -1.05
SNX13-201ENST00000409076 WFS1O76024 890 aa8.48□□□□□ -1.05
SNX13-201ENST00000409076 LGALS2P05162 132 aa8.48□□□□□ -1.05
SNX13-201ENST00000409076 CYP2C9P11712 490 aa8.48□□□□□ -1.05
SNX13-201ENST00000409076 IL4RP24394 825 aa8.48□□□□□ -1.05
SNX13-201ENST00000409076 GRIA2P42262 883 aa8.48□□□□□ -1.05
SNX13-201ENST00000409076 TLR1Q15399 786 aa8.48□□□□□ -1.05
SNX13-201ENST00000409076 SURF1Q15526 300 aa8.48□□□□□ -1.05
SNX13-201ENST00000409076 LRRC38Q5VT99 294 aa8.48□□□□□ -1.05
SNX13-201ENST00000409076 ESRP1Q6NXG1 681 aaKnown RBP8.48□□□□□ -1.05
SNX13-201ENST00000409076 MTHFD1LQ6UB35 978 aa8.48□□□□□ -1.05
SNX13-201ENST00000409076 MAVSQ7Z434 540 aa8.48□□□□□ -1.05
SNX13-201ENST00000409076 MILR1Q7Z6M3 343 aa8.48□□□□□ -1.05
SNX13-201ENST00000409076 OR10Q1Q8NGQ4 319 aa8.48□□□□□ -1.05
SNX13-201ENST00000409076 BLOC1S5Q8TDH9 187 aa8.48□□□□□ -1.05
SNX13-201ENST00000409076 ZNF518BQ9C0D4 1074 aa8.48□□□□□ -1.05
SNX13-201ENST00000409076 BRD8Q9H0E9 1235 aa8.48□□□□□ -1.05
SNX13-201ENST00000409076 ADNPQ9H2P0 1102 aa8.48□□□□□ -1.05
SNX13-201ENST00000409076 SMARCAD1Q9H4L7 1026 aa8.48□□□□□ -1.05
SNX13-201ENST00000409076 GALNT8Q9NY28 637 aa8.48□□□□□ -1.05
SNX13-201ENST00000409076 ARHGEF37A1IGU5 675 aa8.47□□□□□ -1.05
SNX13-201ENST00000409076 MOXD2PA6NHM9 499 aa8.47□□□□□ -1.05
SNX13-201ENST00000409076 TRDMT1O14717 391 aaKnown RBP8.47□□□□□ -1.05
SNX13-201ENST00000409076 RGL2O15211 777 aa8.47□□□□□ -1.05
SNX13-201ENST00000409076 TRIM13O60858 407 aa8.47□□□□□ -1.05
SNX13-201ENST00000409076 FAM200BP0CF97 657 aa8.47□□□□□ -1.05
SNX13-201ENST00000409076 RXRBP28702 533 aa8.47□□□□□ -1.05
SNX13-201ENST00000409076 TKTP29401 623 aaKnown RBP8.47□□□□□ -1.05
SNX13-201ENST00000409076 L1CAMP32004 1257 aa8.47□□□□□ -1.05
SNX13-201ENST00000409076 GP5P40197 560 aa8.47□□□□□ -1.05
SNX13-201ENST00000409076 AFF1P51825 1210 aaKnown RBP8.47□□□□□ -1.05
SNX13-201ENST00000409076 MBTD1Q05BQ5 628 aa8.47□□□□□ -1.05
SNX13-201ENST00000409076 ZPBP2Q6X784 338 aa8.47□□□□□ -1.05
SNX13-201ENST00000409076 CIR1Q86X95 450 aaPredicted RBP8.47□□□□□ -1.05
SNX13-201ENST00000409076 KYQ8NBH2 561 aa8.47□□□□□ -1.05
SNX13-201ENST00000409076 AGBL3Q8NEM8 1001 aa8.47□□□□□ -1.05
SNX13-201ENST00000409076 DNAJB14Q8TBM8 379 aa8.47□□□□□ -1.05
SNX13-201ENST00000409076 MZB1Q8WU39 189 aa8.47□□□□□ -1.05
SNX13-201ENST00000409076 VPS50Q96JG6 964 aa8.47□□□□□ -1.05
SNX13-201ENST00000409076 CNDP1Q96KN2 507 aa8.47□□□□□ -1.05
SNX13-201ENST00000409076 SPON2Q9BUD6 331 aa8.47□□□□□ -1.05
SNX13-201ENST00000409076 C1orf50Q9BV19 199 aa8.47□□□□□ -1.05
SNX13-201ENST00000409076 TKTL2Q9H0I9 626 aa8.47□□□□□ -1.05
SNX13-201ENST00000409076 ALG9Q9H6U8 611 aa8.47□□□□□ -1.05
SNX13-201ENST00000409076 ERAP1Q9NZ08 941 aa8.47□□□□□ -1.05
SNX13-201ENST00000409076 A0A0A0MRY4 1105 aa8.47□□□□□ -1.05
SNX13-201ENST00000409076 MAFGO15525 162 aa8.47□□□□□ -1.05
SNX13-201ENST00000409076 UQCRBP14927 111 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms