RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 BCAT1P54687 386 aa17.95■□□□□ 0.46
SMPD4-202ENST00000409031 ITGA7Q13683 1181 aa17.95■□□□□ 0.46
SMPD4-202ENST00000409031 CNTD1Q8N815 330 aa17.95■□□□□ 0.46
SMPD4-202ENST00000409031 MCFD2Q8NI22 146 aa17.95■□□□□ 0.46
SMPD4-202ENST00000409031 LOC100506127A0A0U1RQW1 187 aa17.95■□□□□ 0.46
SMPD4-202ENST00000409031 CYP3A4P08684 503 aa17.95■□□□□ 0.46
SMPD4-202ENST00000409031 CMPK2Q5EBM0 449 aa17.95■□□□□ 0.46
SMPD4-202ENST00000409031 TIGD7Q6NT04 549 aaPredicted RBP17.95■□□□□ 0.46
SMPD4-202ENST00000409031 ZDHHC17Q8IUH5 632 aa17.95■□□□□ 0.46
SMPD4-202ENST00000409031 SAMD3Q8N6K7 520 aa17.95■□□□□ 0.46
SMPD4-202ENST00000409031 UTP15Q8TED0 518 aaKnown RBP17.95■□□□□ 0.46
SMPD4-202ENST00000409031 ELMO3Q96BJ8 720 aa17.95■□□□□ 0.46
SMPD4-202ENST00000409031 SMARCAD1Q9H4L7 1026 aa17.95■□□□□ 0.46
SMPD4-202ENST00000409031 ITSN1Q15811 1721 aa17.95■□□□□ 0.46
SMPD4-202ENST00000409031 SYNCRIPO60506 623 aaKnown RBP17.95■□□□□ 0.46
SMPD4-202ENST00000409031 TIPRLO75663 272 aa17.95■□□□□ 0.46
SMPD4-202ENST00000409031 CRTAMO95727 393 aa17.95■□□□□ 0.46
SMPD4-202ENST00000409031 ICAM1P05362 532 aa17.95■□□□□ 0.46
SMPD4-202ENST00000409031 ABCB1P08183 1280 aaPredicted RBP17.95■□□□□ 0.46
SMPD4-202ENST00000409031 FASTKD3Q14CZ7 662 aaKnown RBP17.95■□□□□ 0.46
SMPD4-202ENST00000409031 ATAD3BQ5T9A4 648 aa17.95■□□□□ 0.46
SMPD4-202ENST00000409031 MPZL3Q6UWV2 235 aa17.95■□□□□ 0.46
SMPD4-202ENST00000409031 ACOT1Q86TX2 421 aa17.95■□□□□ 0.46
SMPD4-202ENST00000409031 FNDC5Q8NAU1 212 aa17.95■□□□□ 0.46
SMPD4-202ENST00000409031 SLCO2A1Q92959 643 aa17.95■□□□□ 0.46
SMPD4-202ENST00000409031 TAMM41Q96BW9 452 aa17.95■□□□□ 0.46
SMPD4-202ENST00000409031 RNF157Q96PX1 679 aa17.95■□□□□ 0.46
SMPD4-202ENST00000409031 TJP2Q9UDY2 1190 aa17.95■□□□□ 0.46
SMPD4-202ENST00000409031 DUSP12Q9UNI6 340 aa17.95■□□□□ 0.46
SMPD4-202ENST00000409031 GTF2BQ00403 316 aa17.94■□□□□ 0.46
SMPD4-202ENST00000409031 UNC5AQ6ZN44 842 aa17.94■□□□□ 0.46
SMPD4-202ENST00000409031 C3orf67Q6ZVT6 689 aa17.94■□□□□ 0.46
SMPD4-202ENST00000409031 DPY30Q9C005 99 aa17.94■□□□□ 0.46
SMPD4-202ENST00000409031 C12orf65Q9H3J6 166 aaKnown RBP17.94■□□□□ 0.46
SMPD4-202ENST00000409031 NID2Q14112 1375 aa17.94■□□□□ 0.46
SMPD4-202ENST00000409031 ADAM17P78536 824 aa17.94■□□□□ 0.46
SMPD4-202ENST00000409031 RNASEH2BQ5TBB1 312 aaKnown RBP17.94■□□□□ 0.46
SMPD4-202ENST00000409031 MINDY2Q8NBR6 621 aa17.94■□□□□ 0.46
SMPD4-202ENST00000409031 FICDQ9BVA6 458 aa17.94■□□□□ 0.46
SMPD4-202ENST00000409031 WWOXQ9NZC7 414 aa17.94■□□□□ 0.46
SMPD4-202ENST00000409031 BNIP3LO60238 219 aa17.94■□□□□ 0.46
SMPD4-202ENST00000409031 DBTP11182 482 aaKnown RBP17.94■□□□□ 0.46
SMPD4-202ENST00000409031 HOXB8P17481 243 aaPredicted RBP17.94■□□□□ 0.46
SMPD4-202ENST00000409031 MAD2L1Q13257 205 aaPredicted RBP17.94■□□□□ 0.46
SMPD4-202ENST00000409031 STRIP1Q5VSL9 837 aa17.94■□□□□ 0.46
SMPD4-202ENST00000409031 MZT2BQ6NZ67 158 aa17.94■□□□□ 0.46
SMPD4-202ENST00000409031 FASTKD5Q7L8L6 764 aaKnown RBP17.94■□□□□ 0.46
SMPD4-202ENST00000409031 GMCL1P1Q8NEA9 526 aa17.94■□□□□ 0.46
SMPD4-202ENST00000409031 ZNF221Q9UK13 617 aa17.94■□□□□ 0.46
SMPD4-202ENST00000409031 TISP43B9A030 160 aa17.94■□□□□ 0.46
SMPD4-202ENST00000409031 CYP1A1P04798 512 aaPredicted RBP17.94■□□□□ 0.46
SMPD4-202ENST00000409031 POU1F1P28069 291 aa17.94■□□□□ 0.46
SMPD4-202ENST00000409031 RPL7AP62424 266 aaKnown RBP17.94■□□□□ 0.46
SMPD4-202ENST00000409031 ZFP69Q49AA0 526 aa17.94■□□□□ 0.46
SMPD4-202ENST00000409031 RALGPS1Q5JS13 557 aa17.94■□□□□ 0.46
SMPD4-202ENST00000409031 RERGLQ9H628 205 aa17.94■□□□□ 0.46
SMPD4-202ENST00000409031 DPP3Q9NY33 737 aa17.94■□□□□ 0.46
SMPD4-202ENST00000409031 A6NHS1 94 aa17.93■□□□□ 0.46
SMPD4-202ENST00000409031 TPH1P17752 444 aa17.93■□□□□ 0.46
SMPD4-202ENST00000409031 POU6F1Q14863 301 aa17.93■□□□□ 0.46
SMPD4-202ENST00000409031 NFIXQ14938 502 aa17.93■□□□□ 0.46
SMPD4-202ENST00000409031 ARSHQ5FYA8 562 aa17.93■□□□□ 0.46
SMPD4-202ENST00000409031 ZNF470Q6ECI4 717 aa17.93■□□□□ 0.46
SMPD4-202ENST00000409031 TTC23LQ6PF05 361 aa17.93■□□□□ 0.46
SMPD4-202ENST00000409031 FAM228AQ86W67 206 aa17.93■□□□□ 0.46
SMPD4-202ENST00000409031 LENG8Q96PV6 779 aaPredicted RBP17.93■□□□□ 0.46
SMPD4-202ENST00000409031 VAT1Q99536 393 aa17.93■□□□□ 0.46
SMPD4-202ENST00000409031 HOPXQ9BPY8 73 aaPredicted RBP17.93■□□□□ 0.46
SMPD4-202ENST00000409031 LEF1Q9UJU2 399 aaPredicted RBP17.93■□□□□ 0.46
SMPD4-202ENST00000409031 CCDC182A6NF36 153 aa17.93■□□□□ 0.46
SMPD4-202ENST00000409031 NRP2O60462 931 aa17.93■□□□□ 0.46
SMPD4-202ENST00000409031 CDC42EP1Q00587 391 aa17.93■□□□□ 0.46
SMPD4-202ENST00000409031 TNS4Q8IZW8 715 aa17.93■□□□□ 0.46
SMPD4-202ENST00000409031 CPT1BQ92523 772 aa17.93■□□□□ 0.46
SMPD4-202ENST00000409031 CRAMP1Q96RY5 1269 aa17.93■□□□□ 0.46
SMPD4-202ENST00000409031 CEP41Q9BYV8 373 aa17.93■□□□□ 0.46
SMPD4-202ENST00000409031 IL22Q9GZX6 179 aa17.93■□□□□ 0.46
SMPD4-202ENST00000409031 PPM1HQ9ULR3 514 aa17.93■□□□□ 0.46
SMPD4-202ENST00000409031 SLC26A3P40879 764 aa17.93■□□□□ 0.46
SMPD4-202ENST00000409031 PLK1P53350 603 aa17.93■□□□□ 0.46
SMPD4-202ENST00000409031 SV2CQ496J9 727 aa17.93■□□□□ 0.46
SMPD4-202ENST00000409031 SPESP1Q6UW49 350 aa17.93■□□□□ 0.46
SMPD4-202ENST00000409031 PAGE2Q7Z2X7 111 aa17.93■□□□□ 0.46
SMPD4-202ENST00000409031 ZNF605Q86T29 641 aa17.93■□□□□ 0.46
SMPD4-202ENST00000409031 FBXO39Q8N4B4 442 aa17.93■□□□□ 0.46
SMPD4-202ENST00000409031 OR2T34Q8NGX1 318 aa17.93■□□□□ 0.46
SMPD4-202ENST00000409031 OR2T3Q8NH03 318 aa17.93■□□□□ 0.46
SMPD4-202ENST00000409031 RAB2BQ8WUD1 216 aa17.93■□□□□ 0.46
SMPD4-202ENST00000409031 AGO4Q9HCK5 861 aaKnown RBP17.93■□□□□ 0.46
SMPD4-202ENST00000409031 KCNQ5Q9NR82 932 aa17.93■□□□□ 0.46
SMPD4-202ENST00000409031 SNX15Q9NRS6 342 aa17.93■□□□□ 0.46
SMPD4-202ENST00000409031 FAM95CA0A1B0GW59 222 aa17.93■□□□□ 0.46
SMPD4-202ENST00000409031 ADRB2P07550 413 aa17.93■□□□□ 0.46
SMPD4-202ENST00000409031 FGRP09769 529 aa17.93■□□□□ 0.46
SMPD4-202ENST00000409031 PNPLA4P41247 253 aa17.93■□□□□ 0.46
SMPD4-202ENST00000409031 RXRGP48443 463 aa17.93■□□□□ 0.46
SMPD4-202ENST00000409031 INO80DQ53TQ3 878 aaPredicted RBP17.93■□□□□ 0.46
SMPD4-202ENST00000409031 CDCA2Q69YH5 1023 aaPredicted RBP17.93■□□□□ 0.46
SMPD4-202ENST00000409031 POP5Q969H6 163 aaKnown RBP17.93■□□□□ 0.46
SMPD4-202ENST00000409031 NPAS2Q99743 824 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms