RNA–Protein interactions for RNA: ENST00000406516.5

LIMK2-204, Transcript of LIM domain kinase 2, humanhuman

TSL 5 BASIC

Gene LIMK2, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-204ENST00000406516 CERS2Q96G23 380 aa15.55■□□□□ 0.08
LIMK2-204ENST00000406516 RCOR3Q9P2K3 495 aaPredicted RBP15.55■□□□□ 0.08
LIMK2-204ENST00000406516 PIN4Q9Y237 131 aaKnown RBP15.55■□□□□ 0.08
LIMK2-204ENST00000406516 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.54■□□□□ 0.08
LIMK2-204ENST00000406516 SP100P23497 879 aaPredicted RBP15.54■□□□□ 0.08
LIMK2-204ENST00000406516 MAGEA10P43363 369 aaPredicted RBP15.54■□□□□ 0.08
LIMK2-204ENST00000406516 ABCG1P45844 678 aa15.54■□□□□ 0.08
LIMK2-204ENST00000406516 ITGA9Q13797 1035 aa15.54■□□□□ 0.08
LIMK2-204ENST00000406516 RALGPS1Q5JS13 557 aa15.54■□□□□ 0.08
LIMK2-204ENST00000406516 SYPL2Q5VXT5 272 aa15.54■□□□□ 0.08
LIMK2-204ENST00000406516 CCNJLQ8IV13 435 aa15.54■□□□□ 0.08
LIMK2-204ENST00000406516 FCRL3Q96P31 734 aaPredicted RBP15.54■□□□□ 0.08
LIMK2-204ENST00000406516 SIKE1Q9BRV8 207 aa15.54■□□□□ 0.08
LIMK2-204ENST00000406516 C1orf21Q9H246 121 aa15.54■□□□□ 0.08
LIMK2-204ENST00000406516 RNF39Q9H2S5 420 aa15.54■□□□□ 0.08
LIMK2-204ENST00000406516 IL23AQ9NPF7 189 aa15.54■□□□□ 0.08
LIMK2-204ENST00000406516 SNX15Q9NRS6 342 aa15.54■□□□□ 0.08
LIMK2-204ENST00000406516 NDE1Q9NXR1 346 aa15.54■□□□□ 0.08
LIMK2-204ENST00000406516 KLHL8Q9P2G9 620 aaPredicted RBP15.54■□□□□ 0.08
LIMK2-204ENST00000406516 COPG2Q9UBF2 871 aa15.54■□□□□ 0.08
LIMK2-204ENST00000406516 PPM1HQ9ULR3 514 aa15.54■□□□□ 0.08
LIMK2-204ENST00000406516 RALGAPA2Q2PPJ7 1873 aa15.54■□□□□ 0.08
LIMK2-204ENST00000406516 A0A088AWK7 358 aa15.54■□□□□ 0.08
LIMK2-204ENST00000406516 EEF2KO00418 725 aaKnown RBP15.54■□□□□ 0.08
LIMK2-204ENST00000406516 PPP1R12AO14974 1030 aaPredicted RBP15.54■□□□□ 0.08
LIMK2-204ENST00000406516 XPO1O14980 1071 aaKnown RBP15.54■□□□□ 0.08
LIMK2-204ENST00000406516 BEST1O76090 585 aa15.54■□□□□ 0.08
LIMK2-204ENST00000406516 RALBP11234 206 aa15.54■□□□□ 0.08
LIMK2-204ENST00000406516 RFC2P35250 354 aa15.54■□□□□ 0.08
LIMK2-204ENST00000406516 GP5P40197 560 aa15.54■□□□□ 0.08
LIMK2-204ENST00000406516 IDH3AP50213 366 aa15.54■□□□□ 0.08
LIMK2-204ENST00000406516 RABGGTBP53611 331 aa15.54■□□□□ 0.08
LIMK2-204ENST00000406516 AP2B1P63010 937 aa15.54■□□□□ 0.08
LIMK2-204ENST00000406516 SOX4Q06945 474 aaPredicted RBP15.54■□□□□ 0.08
LIMK2-204ENST00000406516 LBRQ14739 615 aaKnown RBP15.54■□□□□ 0.08
LIMK2-204ENST00000406516 ADAM32Q8TC27 787 aa15.54■□□□□ 0.08
LIMK2-204ENST00000406516 LINC01599Q8WXQ3 324 aa15.54■□□□□ 0.08
LIMK2-204ENST00000406516 SEPT8Q92599 483 aa15.54■□□□□ 0.08
LIMK2-204ENST00000406516 AZIN2Q96A70 460 aa15.54■□□□□ 0.08
LIMK2-204ENST00000406516 ZNF669Q96BR6 464 aaPredicted RBP15.54■□□□□ 0.08
LIMK2-204ENST00000406516 ZNF560Q96MR9 790 aa15.54■□□□□ 0.08
LIMK2-204ENST00000406516 NAT9Q9BTE0 207 aa15.54■□□□□ 0.08
LIMK2-204ENST00000406516 SORCS3Q9UPU3 1222 aa15.54■□□□□ 0.08
LIMK2-204ENST00000406516 ENO4A6NNW6 628 aa15.53■□□□□ 0.08
LIMK2-204ENST00000406516 MAP3K13O43283 966 aa15.53■□□□□ 0.08
LIMK2-204ENST00000406516 DAB1O75553 588 aa15.53■□□□□ 0.08
LIMK2-204ENST00000406516 TAF6P49848 677 aa15.53■□□□□ 0.08
LIMK2-204ENST00000406516 MLLT1Q03111 559 aaPredicted RBP15.53■□□□□ 0.08
LIMK2-204ENST00000406516 NAB1Q13506 487 aa15.53■□□□□ 0.08
LIMK2-204ENST00000406516 IZUMO2Q6UXV1 221 aa15.53■□□□□ 0.08
LIMK2-204ENST00000406516 HFE2Q6ZVN8 426 aa15.53■□□□□ 0.08
LIMK2-204ENST00000406516 OTOP2Q7RTS6 562 aa15.53■□□□□ 0.08
LIMK2-204ENST00000406516 OSTM1Q86WC4 334 aa15.53■□□□□ 0.08
LIMK2-204ENST00000406516 DCLK2Q8N568 766 aa15.53■□□□□ 0.08
LIMK2-204ENST00000406516 B3GALNT2Q8NCR0 500 aa15.53■□□□□ 0.08
LIMK2-204ENST00000406516 PIGVQ9NUD9 493 aa15.53■□□□□ 0.08
LIMK2-204ENST00000406516 FAM72CH0Y354 149 aa15.53■□□□□ 0.08
LIMK2-204ENST00000406516 HUS1O60921 280 aa15.53■□□□□ 0.08
LIMK2-204ENST00000406516 KLHL2O95198 593 aa15.53■□□□□ 0.08
LIMK2-204ENST00000406516 NCF2P19878 526 aaPredicted RBP15.53■□□□□ 0.08
LIMK2-204ENST00000406516 GARSP41250 739 aaKnown RBP15.53■□□□□ 0.08
LIMK2-204ENST00000406516 COPAP53621 1224 aa15.53■□□□□ 0.08
LIMK2-204ENST00000406516 EPHB1P54762 984 aa15.53■□□□□ 0.08
LIMK2-204ENST00000406516 ABCE1P61221 599 aaKnown RBP15.53■□□□□ 0.08
LIMK2-204ENST00000406516 DEUP1Q05D60 604 aa15.53■□□□□ 0.08
LIMK2-204ENST00000406516 PPIGQ13427 754 aaKnown RBP eCLIP15.53■□□□□ 0.081e-7■■□□□ 13.4
LIMK2-204ENST00000406516 FAM72AQ5TYM5 149 aa15.53■□□□□ 0.08
LIMK2-204ENST00000406516 FAM72DQ6L9T8 149 aa15.53■□□□□ 0.08
LIMK2-204ENST00000406516 FAM72BQ86X60 149 aa15.53■□□□□ 0.08
LIMK2-204ENST00000406516 TNIP3Q96KP6 325 aa15.53■□□□□ 0.08
LIMK2-204ENST00000406516 ADAM2Q99965 735 aa15.53■□□□□ 0.08
LIMK2-204ENST00000406516 OXCT2Q9BYC2 517 aaPredicted RBP15.53■□□□□ 0.08
LIMK2-204ENST00000406516 VCXQ9H320 206 aa15.53■□□□□ 0.08
LIMK2-204ENST00000406516 CYP4F11Q9HBI6 524 aa15.53■□□□□ 0.08
LIMK2-204ENST00000406516 SCOCQ9UIL1 159 aa15.53■□□□□ 0.08
LIMK2-204ENST00000406516 PDE5AO76074 875 aa15.52■□□□□ 0.08
LIMK2-204ENST00000406516 SORBS2O94875 1100 aaKnown RBP15.52■□□□□ 0.08
LIMK2-204ENST00000406516 CPA3P15088 417 aa15.52■□□□□ 0.08
LIMK2-204ENST00000406516 MX2P20592 715 aa15.52■□□□□ 0.08
LIMK2-204ENST00000406516 GRK2P25098 689 aa15.52■□□□□ 0.08
LIMK2-204ENST00000406516 PEX6Q13608 980 aa15.52■□□□□ 0.08
LIMK2-204ENST00000406516 DSC3Q14574 896 aa15.52■□□□□ 0.08
LIMK2-204ENST00000406516 NAIF1Q69YI7 327 aaPredicted RBP15.52■□□□□ 0.08
LIMK2-204ENST00000406516 PDPK2PQ6A1A2 396 aa15.52■□□□□ 0.08
LIMK2-204ENST00000406516 PLD6Q8N2A8 252 aaKnown RBP15.52■□□□□ 0.08
LIMK2-204ENST00000406516 RNF169Q8NCN4 708 aa15.52■□□□□ 0.08
LIMK2-204ENST00000406516 NPY6RQ99463 290 aa15.52■□□□□ 0.08
LIMK2-204ENST00000406516 AGAP2Q99490 1192 aa15.52■□□□□ 0.08
LIMK2-204ENST00000406516 CPNE1Q99829 537 aa15.52■□□□□ 0.08
LIMK2-204ENST00000406516 STN1Q9H668 368 aaKnown RBP15.52■□□□□ 0.08
LIMK2-204ENST00000406516 LRRC4Q9HBW1 653 aa15.52■□□□□ 0.08
LIMK2-204ENST00000406516 GDAP2Q9NXN4 497 aa15.52■□□□□ 0.08
LIMK2-204ENST00000406516 NOS2P35228 1153 aa15.52■□□□□ 0.07
LIMK2-204ENST00000406516 GRIK3Q13003 919 aa15.52■□□□□ 0.07
LIMK2-204ENST00000406516 USP4Q13107 963 aa15.52■□□□□ 0.07
LIMK2-204ENST00000406516 DPYSQ14117 519 aa15.52■□□□□ 0.07
LIMK2-204ENST00000406516 SPANXN3Q5MJ09 141 aa15.52■□□□□ 0.07
LIMK2-204ENST00000406516 TMEM240Q5SV17 173 aa15.52■□□□□ 0.07
LIMK2-204ENST00000406516 CNKSR3Q6P9H4 555 aa15.52■□□□□ 0.07
LIMK2-204ENST00000406516 STRA8Q7Z7C7 330 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms