RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 GTF2H1P32780 548 aa12.25□□□□□ -0.45
SPTLC1P3-201ENST00000403408 PSMC2P35998 433 aaKnown RBP12.25□□□□□ -0.45
SPTLC1P3-201ENST00000403408 CLCN6P51797 869 aa12.25□□□□□ -0.45
SPTLC1P3-201ENST00000403408 NFATC3Q12968 1075 aa12.25□□□□□ -0.45
SPTLC1P3-201ENST00000403408 ADAM9Q13443 819 aa12.25□□□□□ -0.45
SPTLC1P3-201ENST00000403408 EIF4EBP2Q13542 120 aaPredicted RBP12.25□□□□□ -0.45
SPTLC1P3-201ENST00000403408 CUL2Q13617 745 aa12.25□□□□□ -0.45
SPTLC1P3-201ENST00000403408 FGL2Q14314 439 aa12.25□□□□□ -0.45
SPTLC1P3-201ENST00000403408 ZC3H12AQ5D1E8 599 aaKnown RBP12.25□□□□□ -0.45
SPTLC1P3-201ENST00000403408 GUSBP11Q6P575 273 aa12.25□□□□□ -0.45
SPTLC1P3-201ENST00000403408 CRTC1Q6UUV9 634 aa12.25□□□□□ -0.45
SPTLC1P3-201ENST00000403408 Q6ZVU0 165 aa12.25□□□□□ -0.45
SPTLC1P3-201ENST00000403408 PRICKLE2Q7Z3G6 844 aa12.25□□□□□ -0.45
SPTLC1P3-201ENST00000403408 IFI44Q8TCB0 444 aa12.25□□□□□ -0.45
SPTLC1P3-201ENST00000403408 IRGQQ8WZA9 623 aa12.25□□□□□ -0.45
SPTLC1P3-201ENST00000403408 KAT5Q92993 513 aa12.25□□□□□ -0.45
SPTLC1P3-201ENST00000403408 ARRDC3Q96B67 414 aa12.25□□□□□ -0.45
SPTLC1P3-201ENST00000403408 BMFQ96LC9 184 aa12.25□□□□□ -0.45
SPTLC1P3-201ENST00000403408 SPAG5Q96R06 1193 aa12.25□□□□□ -0.45
SPTLC1P3-201ENST00000403408 PRMT1Q99873 361 aaKnown RBP12.25□□□□□ -0.45
SPTLC1P3-201ENST00000403408 THSD1Q9NS62 852 aa12.25□□□□□ -0.45
SPTLC1P3-201ENST00000403408 GPR27Q9NS67 375 aa12.25□□□□□ -0.45
SPTLC1P3-201ENST00000403408 TJP2Q9UDY2 1190 aa12.25□□□□□ -0.45
SPTLC1P3-201ENST00000403408 TPX2Q9ULW0 747 aaKnown RBP12.25□□□□□ -0.45
SPTLC1P3-201ENST00000403408 TLR6Q9Y2C9 796 aa12.25□□□□□ -0.45
SPTLC1P3-201ENST00000403408 OR51B4Q9Y5P0 310 aa12.25□□□□□ -0.45
SPTLC1P3-201ENST00000403408 UNC13CQ8NB66 2214 aa12.25□□□□□ -0.45
SPTLC1P3-201ENST00000403408 SCAMP1O15126 338 aa12.24□□□□□ -0.45
SPTLC1P3-201ENST00000403408 RAD51BO15315 384 aa12.24□□□□□ -0.45
SPTLC1P3-201ENST00000403408 ATP9BO43861 1147 aa12.24□□□□□ -0.45
SPTLC1P3-201ENST00000403408 SETSIPP0DME0 302 aa12.24□□□□□ -0.45
SPTLC1P3-201ENST00000403408 VDRP11473 427 aa12.24□□□□□ -0.45
SPTLC1P3-201ENST00000403408 KRT13P13646 458 aa12.24□□□□□ -0.45
SPTLC1P3-201ENST00000403408 PLK1P53350 603 aa12.24□□□□□ -0.45
SPTLC1P3-201ENST00000403408 SLC8A3P57103 927 aa12.24□□□□□ -0.45
SPTLC1P3-201ENST00000403408 ARL13BQ3SXY8 428 aa12.24□□□□□ -0.45
SPTLC1P3-201ENST00000403408 SETMARQ53H47 684 aaPredicted RBP12.24□□□□□ -0.45
SPTLC1P3-201ENST00000403408 PERM1Q5SV97 790 aa12.24□□□□□ -0.45
SPTLC1P3-201ENST00000403408 SEL1L3Q68CR1 1132 aa12.24□□□□□ -0.45
SPTLC1P3-201ENST00000403408 OR6B2Q6IFH4 312 aa12.24□□□□□ -0.45
SPTLC1P3-201ENST00000403408 ABI3BPQ7Z7G0 1075 aa12.24□□□□□ -0.45
SPTLC1P3-201ENST00000403408 TTC39CQ8N584 583 aa12.24□□□□□ -0.45
SPTLC1P3-201ENST00000403408 ZNF557Q8N988 423 aaPredicted RBP12.24□□□□□ -0.45
SPTLC1P3-201ENST00000403408 MAPK15Q8TD08 544 aa12.24□□□□□ -0.45
SPTLC1P3-201ENST00000403408 INTS4Q96HW7 963 aaKnown RBP12.24□□□□□ -0.45
SPTLC1P3-201ENST00000403408 ZNF396Q96N95 335 aaPredicted RBP12.24□□□□□ -0.45
SPTLC1P3-201ENST00000403408 MIS12Q9H081 205 aa12.24□□□□□ -0.45
SPTLC1P3-201ENST00000403408 NLGN3Q9NZ94 848 aa12.24□□□□□ -0.45
SPTLC1P3-201ENST00000403408 HESX1Q9UBX0 185 aa12.24□□□□□ -0.45
SPTLC1P3-201ENST00000403408 PNMA8BQ9ULN7 279 aaPredicted RBP12.24□□□□□ -0.45
SPTLC1P3-201ENST00000403408 SCN8AQ9UQD0 1980 aa12.24□□□□□ -0.45
SPTLC1P3-201ENST00000403408 COQ4Q9Y3A0 265 aa12.24□□□□□ -0.45
SPTLC1P3-201ENST00000403408 CEP83Q9Y592 693 aa12.24□□□□□ -0.45
SPTLC1P3-201ENST00000403408 A0A1B0GVL5 298 aa12.23□□□□□ -0.45
SPTLC1P3-201ENST00000403408 POM121BA6NF01 834 aa12.23□□□□□ -0.45
SPTLC1P3-201ENST00000403408 MCF2LO15068 1137 aa12.23□□□□□ -0.45
SPTLC1P3-201ENST00000403408 NOBOXO60393 691 aa12.23□□□□□ -0.45
SPTLC1P3-201ENST00000403408 MAGEC1O60732 1142 aa12.23□□□□□ -0.45
SPTLC1P3-201ENST00000403408 RHOBTB3O94955 611 aa12.23□□□□□ -0.45
SPTLC1P3-201ENST00000403408 MT-CO1P00395 513 aa12.23□□□□□ -0.45
SPTLC1P3-201ENST00000403408 IGLV3-25P01717 112 aa12.23□□□□□ -0.45
SPTLC1P3-201ENST00000403408 BRD2P25440 801 aaKnown RBP12.23□□□□□ -0.45
SPTLC1P3-201ENST00000403408 NUDT1P36639 197 aa12.23□□□□□ -0.45
SPTLC1P3-201ENST00000403408 ME1P48163 572 aa12.23□□□□□ -0.45
SPTLC1P3-201ENST00000403408 RPL34P49207 117 aaKnown RBP12.23□□□□□ -0.45
SPTLC1P3-201ENST00000403408 CENPCQ03188 943 aa12.23□□□□□ -0.45
SPTLC1P3-201ENST00000403408 LRMPQ12912 555 aa12.23□□□□□ -0.45
SPTLC1P3-201ENST00000403408 FZD2Q14332 565 aa12.23□□□□□ -0.45
SPTLC1P3-201ENST00000403408 TGIF1Q15583 401 aa12.23□□□□□ -0.45
SPTLC1P3-201ENST00000403408 DLG2Q15700 870 aa12.23□□□□□ -0.45
SPTLC1P3-201ENST00000403408 CDKN3Q16667 212 aa12.23□□□□□ -0.45
SPTLC1P3-201ENST00000403408 ERICH6BQ5W0A0 696 aa12.23□□□□□ -0.45
SPTLC1P3-201ENST00000403408 CLEC14AQ86T13 490 aa12.23□□□□□ -0.45
SPTLC1P3-201ENST00000403408 CEP57L1Q8IYX8 460 aa12.23□□□□□ -0.45
SPTLC1P3-201ENST00000403408 CCAR2Q8N163 923 aaKnown RBP12.23□□□□□ -0.45
SPTLC1P3-201ENST00000403408 CCDC150Q8NCX0 1101 aa12.23□□□□□ -0.45
SPTLC1P3-201ENST00000403408 ZNF548Q8NEK5 533 aaPredicted RBP12.23□□□□□ -0.45
SPTLC1P3-201ENST00000403408 OR8D1Q8WZ84 308 aa12.23□□□□□ -0.45
SPTLC1P3-201ENST00000403408 CALN1Q9BXU9 219 aa12.23□□□□□ -0.45
SPTLC1P3-201ENST00000403408 PREBQ9HCU5 417 aa12.23□□□□□ -0.45
SPTLC1P3-201ENST00000403408 STARD5Q9NSY2 213 aa12.23□□□□□ -0.45
SPTLC1P3-201ENST00000403408 FAM13BQ9NYF5 915 aa12.23□□□□□ -0.45
SPTLC1P3-201ENST00000403408 HPSEQ9Y251 543 aa12.23□□□□□ -0.45
SPTLC1P3-201ENST00000403408 PCDHGA8Q9Y5G5 932 aa12.23□□□□□ -0.45
SPTLC1P3-201ENST00000403408 ICE1Q9Y2F5 2266 aa12.22□□□□□ -0.45
SPTLC1P3-201ENST00000403408 K7ERQ8 282 aa12.22□□□□□ -0.45
SPTLC1P3-201ENST00000403408 SPINT1O43278 529 aa12.22□□□□□ -0.45
SPTLC1P3-201ENST00000403408 MOCS3O95396 460 aa12.22□□□□□ -0.45
SPTLC1P3-201ENST00000403408 PFKFB1P16118 471 aa12.22□□□□□ -0.45
SPTLC1P3-201ENST00000403408 GGCXP38435 758 aa12.22□□□□□ -0.45
SPTLC1P3-201ENST00000403408 VASPP50552 380 aaPredicted RBP12.22□□□□□ -0.45
SPTLC1P3-201ENST00000403408 PKP1Q13835 747 aa12.22□□□□□ -0.45
SPTLC1P3-201ENST00000403408 CNGA2Q16280 664 aa12.22□□□□□ -0.45
SPTLC1P3-201ENST00000403408 TMEM259Q4ZIN3 620 aa12.22□□□□□ -0.45
SPTLC1P3-201ENST00000403408 RNF219Q5W0B1 726 aaPredicted RBP12.22□□□□□ -0.45
SPTLC1P3-201ENST00000403408 CCDC81Q6ZN84 652 aa12.22□□□□□ -0.45
SPTLC1P3-201ENST00000403408 Q6ZSR6 202 aa12.22□□□□□ -0.45
SPTLC1P3-201ENST00000403408 EFL1Q7Z2Z2 1120 aaKnown RBP12.22□□□□□ -0.45
SPTLC1P3-201ENST00000403408 HORMAD1Q86X24 394 aa12.22□□□□□ -0.45
SPTLC1P3-201ENST00000403408 CHSY1Q86X52 802 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms