RNA–Protein interactions for RNA: ENST00000402989.5

SMC6-203, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMC6, Length 3,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-203ENST00000402989 BRD8Q9H0E9 1235 aa4.45□□□□□ -1.7
SMC6-203ENST00000402989 AGO3Q9H9G7 860 aaKnown RBP4.45□□□□□ -1.7
SMC6-203ENST00000402989 PNPLA8Q9NP80 782 aa4.45□□□□□ -1.7
SMC6-203ENST00000402989 CHST12Q9NRB3 414 aa4.45□□□□□ -1.7
SMC6-203ENST00000402989 NDFIP2Q9NV92 336 aa4.45□□□□□ -1.7
SMC6-203ENST00000402989 SIRPGQ9P1W8 387 aa4.45□□□□□ -1.7
SMC6-203ENST00000402989 PCDH10Q9P2E7 1040 aa4.45□□□□□ -1.7
SMC6-203ENST00000402989 MORF4L1Q9UBU8 362 aa4.45□□□□□ -1.7
SMC6-203ENST00000402989 FETUBQ9UGM5 382 aa4.45□□□□□ -1.7
SMC6-203ENST00000402989 ZNF180Q9UJW8 692 aa4.45□□□□□ -1.7
SMC6-203ENST00000402989 RUVBL2Q9Y230 463 aaKnown RBP4.45□□□□□ -1.7
SMC6-203ENST00000402989 C2P06681 752 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 CD68P34810 354 aaPredicted RBP4.44□□□□□ -1.7
SMC6-203ENST00000402989 SPRP35270 261 aaPredicted RBP4.44□□□□□ -1.7
SMC6-203ENST00000402989 VHLP40337 213 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 GPR15P49685 360 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 CRYBB1P53674 252 aaPredicted RBP4.44□□□□□ -1.7
SMC6-203ENST00000402989 NME5P56597 212 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 DDR2Q16832 855 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 GRAMD1BQ3KR37 738 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 FBXO48Q5FWF7 155 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 WASHC2DQ5SRD0 308 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 LPCAT4Q643R3 524 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 ESRP1Q6NXG1 681 aaKnown RBP4.44□□□□□ -1.7
SMC6-203ENST00000402989 ALKAL1Q6UXT8 129 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 PTAR1Q7Z6K3 402 aaPredicted RBP4.44□□□□□ -1.7
SMC6-203ENST00000402989 HPS6Q86YV9 775 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 TDRD5Q8NAT2 981 aaKnown RBP4.44□□□□□ -1.7
SMC6-203ENST00000402989 OR6P1Q8NGX9 317 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 URGCPQ8TCY9 931 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 MAPK15Q8TD08 544 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 CENPIQ92674 756 aaPredicted RBP4.44□□□□□ -1.7
SMC6-203ENST00000402989 VPS39Q96JC1 886 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 OLFM3Q96PB7 478 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 PANX3Q96QZ0 392 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 OR52B2Q96RD2 323 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 ARHGAP39Q9C0H5 1083 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 MOCS1Q9NZB8 636 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 COPG2Q9UBF2 871 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 SLC7A8Q9UHI5 535 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 PPM1HQ9ULR3 514 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 DERAQ9Y315 318 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 USP3Q9Y6I4 520 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 IQCA1LA6NCM1 817 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 GOLGA8CPA6NN73 597 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 HACD1B0YJ81 288 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 AURKAO14965 403 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 DCLK1O15075 740 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 SIN3BO75182 1162 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 STAU1O95793 577 aaKnown RBP4.44□□□□□ -1.7
SMC6-203ENST00000402989 SERPINE1P05121 402 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 PRKCGP05129 697 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 HNRNPLP14866 589 aaKnown RBP eCLIP4.44□□□□□ -1.71e-6■■□□□ 13.4
SMC6-203ENST00000402989 TSHRP16473 764 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 GNAZP19086 355 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 IDH3AP50213 366 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 SERPINB8P50452 374 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 NUDT2P50583 147 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 COPAP53621 1224 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 SLC12A2P55011 1212 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 ABCE1P61221 599 aaKnown RBP4.44□□□□□ -1.7
SMC6-203ENST00000402989 MRPS6P82932 125 aaKnown RBP4.44□□□□□ -1.7
SMC6-203ENST00000402989 NIPAL4Q0D2K0 466 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 PRPSAP1Q14558 356 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 CNGA3Q16281 694 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 GEN1Q17RS7 908 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 SLC39A12Q504Y0 691 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 ZNF470Q6ECI4 717 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 LAYNQ6UX15 382 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 MARK2Q7KZI7 788 aaKnown RBP4.44□□□□□ -1.7
SMC6-203ENST00000402989 MAVSQ7Z434 540 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 METTL23Q86XA0 190 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 ZNF398Q8TD17 642 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 DQX1Q8TE96 717 aaKnown RBP4.44□□□□□ -1.7
SMC6-203ENST00000402989 EMID1Q96A84 441 aaPredicted RBP4.44□□□□□ -1.7
SMC6-203ENST00000402989 PHF21BQ96EK2 531 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 TMA16Q96EY4 203 aaKnown RBP4.44□□□□□ -1.7
SMC6-203ENST00000402989 C7orf26Q96N11 449 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 ADAM2Q99965 735 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 COG4Q9H9E3 785 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 WDR6Q9NNW5 1121 aaKnown RBP4.44□□□□□ -1.7
SMC6-203ENST00000402989 NT5MQ9NPB1 228 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 RBM22Q9NW64 420 aaKnown RBP eCLIP4.44□□□□□ -1.79e-20■■■■■ 33.3
SMC6-203ENST00000402989 GDAP2Q9NXN4 497 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 NDE1Q9NXR1 346 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 LNPEPQ9UIQ6 1025 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 GNEQ9Y223 722 aaKnown RBP4.44□□□□□ -1.7
SMC6-203ENST00000402989 RBM47A0AV96 593 aaKnown RBP4.44□□□□□ -1.7
SMC6-203ENST00000402989 DPPA5A6NC42 116 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.44□□□□□ -1.7
SMC6-203ENST00000402989 PIGNO95427 931 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 TBX18O95935 607 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 ZNF865P0CJ78 1059 aaPredicted RBP4.44□□□□□ -1.7
SMC6-203ENST00000402989 HDCP19113 662 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 WARSP23381 471 aaKnown RBP4.44□□□□□ -1.7
SMC6-203ENST00000402989 GRK4P32298 578 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 PBX3P40426 434 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 CCNFP41002 786 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 MAGEA3P43357 314 aa4.44□□□□□ -1.7
SMC6-203ENST00000402989 OR1G1P47890 313 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms