RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 KRT81Q14533 505 aa7.7□□□□□ -1.18
USP16-204ENST00000399976 MESDQ14696 234 aa7.7□□□□□ -1.18
USP16-204ENST00000399976 GEN1Q17RS7 908 aa7.7□□□□□ -1.18
USP16-204ENST00000399976 FAM72AQ5TYM5 149 aa7.7□□□□□ -1.18
USP16-204ENST00000399976 NCBP2-AS2Q69YL0 99 aa7.7□□□□□ -1.18
USP16-204ENST00000399976 FAM72DQ6L9T8 149 aa7.7□□□□□ -1.18
USP16-204ENST00000399976 C4orf22Q6V702 233 aa7.7□□□□□ -1.18
USP16-204ENST00000399976 TPGS1Q6ZTW0 290 aa7.7□□□□□ -1.18
USP16-204ENST00000399976 DAAM2Q86T65 1068 aa7.7□□□□□ -1.18
USP16-204ENST00000399976 LONP2Q86WA8 852 aa7.7□□□□□ -1.18
USP16-204ENST00000399976 FAM72BQ86X60 149 aa7.7□□□□□ -1.18
USP16-204ENST00000399976 TMEM105Q8N8V8 129 aa7.7□□□□□ -1.18
USP16-204ENST00000399976 ZBTB44Q8NCP5 570 aa7.7□□□□□ -1.18
USP16-204ENST00000399976 FAM174AQ8TBP5 190 aa7.7□□□□□ -1.18
USP16-204ENST00000399976 ASB12Q8WXK4 309 aa7.7□□□□□ -1.18
USP16-204ENST00000399976 MYEOVQ96EZ4 313 aa7.7□□□□□ -1.18
USP16-204ENST00000399976 HOMER3Q9NSC5 361 aa7.7□□□□□ -1.18
USP16-204ENST00000399976 USP36Q9P275 1121 aaKnown RBP7.7□□□□□ -1.18
USP16-204ENST00000399976 RNF14Q9UBS8 474 aa7.7□□□□□ -1.18
USP16-204ENST00000399976 LAMA2P24043 3122 aaKnown RBP7.69□□□□□ -1.18
USP16-204ENST00000399976 RASA4BC9J798 803 aa7.69□□□□□ -1.18
USP16-204ENST00000399976 PRRT4C9JH25 899 aa7.69□□□□□ -1.18
USP16-204ENST00000399976 APOC4-APOC2K7ER74 178 aa7.69□□□□□ -1.18
USP16-204ENST00000399976 RASA4O43374 803 aa7.69□□□□□ -1.18
USP16-204ENST00000399976 ZNF217O75362 1048 aa7.69□□□□□ -1.18
USP16-204ENST00000399976 ZRANB2O95218 330 aaKnown RBP eCLIP7.69□□□□□ -1.18
USP16-204ENST00000399976 APOC2P02655 101 aa7.69□□□□□ -1.18
USP16-204ENST00000399976 HOXD12P35452 270 aa7.69□□□□□ -1.18
USP16-204ENST00000399976 PPIDQ08752 370 aaKnown RBP7.69□□□□□ -1.18
USP16-204ENST00000399976 HNRNPDQ14103 355 aaKnown RBP7.69□□□□□ -1.18
USP16-204ENST00000399976 POLD3Q15054 466 aaPredicted RBP7.69□□□□□ -1.18
USP16-204ENST00000399976 CRY1Q16526 586 aa7.69□□□□□ -1.18
USP16-204ENST00000399976 PEAR1Q5VY43 1037 aaPredicted RBP7.69□□□□□ -1.18
USP16-204ENST00000399976 TMEM215Q68D42 235 aa7.69□□□□□ -1.18
USP16-204ENST00000399976 SPOCD1Q6ZMY3 1216 aa7.69□□□□□ -1.18
USP16-204ENST00000399976 C1orf210Q8IVY1 113 aa7.69□□□□□ -1.18
USP16-204ENST00000399976 CARNMT1Q8N4J0 409 aa7.69□□□□□ -1.18
USP16-204ENST00000399976 ZNF513Q8N8E2 541 aaPredicted RBP7.69□□□□□ -1.18
USP16-204ENST00000399976 KCTD6Q8NC69 237 aa7.69□□□□□ -1.18
USP16-204ENST00000399976 OR2T3Q8NH03 318 aa7.69□□□□□ -1.18
USP16-204ENST00000399976 WFDC5Q8TCV5 224 aa7.69□□□□□ -1.18
USP16-204ENST00000399976 PBKQ96KB5 322 aa7.69□□□□□ -1.18
USP16-204ENST00000399976 ZNF830Q96NB3 372 aaPredicted RBP7.69□□□□□ -1.18
USP16-204ENST00000399976 LRFN3Q9BTN0 628 aa7.69□□□□□ -1.18
USP16-204ENST00000399976 RRAGDQ9NQL2 400 aaPredicted RBP7.69□□□□□ -1.18
USP16-204ENST00000399976 DNPEPQ9ULA0 475 aa7.69□□□□□ -1.18
USP16-204ENST00000399976 CDH23Q9H251 3354 aa7.69□□□□□ -1.18
USP16-204ENST00000399976 AP1G1O43747 822 aa7.69□□□□□ -1.18
USP16-204ENST00000399976 FOXD2O60548 495 aaPredicted RBP7.69□□□□□ -1.18
USP16-204ENST00000399976 CNTN5O94779 1100 aa7.69□□□□□ -1.18
USP16-204ENST00000399976 SP100P23497 879 aaPredicted RBP7.69□□□□□ -1.18
USP16-204ENST00000399976 NOP2P46087 812 aaKnown RBP7.69□□□□□ -1.18
USP16-204ENST00000399976 CXCL12P48061 93 aa7.69□□□□□ -1.18
USP16-204ENST00000399976 RPL26P61254 145 aaKnown RBP7.69□□□□□ -1.18
USP16-204ENST00000399976 ST8SIA6P61647 398 aa7.69□□□□□ -1.18
USP16-204ENST00000399976 KLF1Q13351 362 aaPredicted RBP7.69□□□□□ -1.18
USP16-204ENST00000399976 ELAVL3Q14576 367 aaKnown RBP7.69□□□□□ -1.18
USP16-204ENST00000399976 ZNF234Q14588 700 aa7.69□□□□□ -1.18
USP16-204ENST00000399976 STARD3Q14849 445 aa7.69□□□□□ -1.18
USP16-204ENST00000399976 PDK1Q15118 436 aa7.69□□□□□ -1.18
USP16-204ENST00000399976 PRKD1Q15139 912 aaPredicted RBP7.69□□□□□ -1.18
USP16-204ENST00000399976 CA9Q16790 459 aa7.69□□□□□ -1.18
USP16-204ENST00000399976 NEK5Q6P3R8 708 aa7.69□□□□□ -1.18
USP16-204ENST00000399976 SCYL2Q6P3W7 929 aa7.69□□□□□ -1.18
USP16-204ENST00000399976 SLC36A4Q6YBV0 504 aa7.69□□□□□ -1.18
USP16-204ENST00000399976 PEX26Q7Z412 305 aa7.69□□□□□ -1.18
USP16-204ENST00000399976 KBTBD6Q86V97 674 aa7.69□□□□□ -1.18
USP16-204ENST00000399976 RASGEF1CQ8N431 466 aa7.69□□□□□ -1.18
USP16-204ENST00000399976 PQLC3Q8N755 202 aa7.69□□□□□ -1.18
USP16-204ENST00000399976 TADA1Q96BN2 335 aa7.69□□□□□ -1.18
USP16-204ENST00000399976 RTP4Q96DX8 246 aa7.69□□□□□ -1.18
USP16-204ENST00000399976 ZC3H10Q96K80 434 aaKnown RBP7.69□□□□□ -1.18
USP16-204ENST00000399976 SRPK1Q96SB4 655 aaKnown RBP7.69□□□□□ -1.18
USP16-204ENST00000399976 VPS51Q9UID3 782 aa7.69□□□□□ -1.18
USP16-204ENST00000399976 RPL26L1Q9UNX3 145 aaKnown RBP7.69□□□□□ -1.18
USP16-204ENST00000399976 PLA2G4CQ9UP65 541 aa7.69□□□□□ -1.18
USP16-204ENST00000399976 STON1Q9Y6Q2 735 aa7.69□□□□□ -1.18
USP16-204ENST00000399976 TP53BP1Q12888 1972 aaPredicted RBP7.69□□□□□ -1.18
USP16-204ENST00000399976 TBC1D3BA6NDS4 549 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 KIF2AO00139 706 aaPredicted RBP7.68□□□□□ -1.18
USP16-204ENST00000399976 APOL1O14791 398 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 PPP1R12AO14974 1030 aaPredicted RBP7.68□□□□□ -1.18
USP16-204ENST00000399976 ADAM23O75077 832 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 RNF40O75150 1001 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 TJP3O95049 919 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 GOT1P17174 413 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 GARSP41250 739 aaKnown RBP7.68□□□□□ -1.18
USP16-204ENST00000399976 AP1S1P61966 158 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 TUBB2AQ13885 445 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 RAB6CQ53S08 254 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 RNF219Q5W0B1 726 aaPredicted RBP7.68□□□□□ -1.18
USP16-204ENST00000399976 ZC3H14Q6PJT7 736 aaKnown RBP7.68□□□□□ -1.18
USP16-204ENST00000399976 BBS5Q8N3I7 341 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 PCDH19Q8TAB3 1148 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 RAB7BQ96AH8 199 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 ZNF641Q96N77 438 aaPredicted RBP7.68□□□□□ -1.18
USP16-204ENST00000399976 PSKH2Q96QS6 385 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 TUBB2BQ9BVA1 445 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 HDAC8Q9BY41 377 aa7.68□□□□□ -1.18
USP16-204ENST00000399976 RAB6CQ9H0N0 254 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms