RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 CUL2Q13617 745 aa11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 TARBP2Q15633 366 aaKnown RBP11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 ZNF662Q6ZS27 426 aa11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 KIAA1143Q96AT1 154 aaPredicted RBP11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 PRRG3Q9BZD7 231 aa11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 PTPRHQ9HD43 1115 aa11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 RBM22Q9NW64 420 aaKnown RBP eCLIP11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 STARD13Q9Y3M8 1113 aa11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 NFASCO94856 1347 aa11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 LRRC72A6NJI9 287 aa11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 SEMA3DO95025 777 aa11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 SLC35G4P0C7Q5 338 aa11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 JMJD7P0C870 316 aa11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 CHKAP35790 457 aa11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 FDFT1P37268 417 aa11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 ITGA7Q13683 1181 aa11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 ITGA9Q13797 1035 aa11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 TREML1Q86YW5 311 aa11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 RASGEF1AQ8N9B8 481 aa11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 CNDP1Q96KN2 507 aa11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 TGS1Q96RS0 853 aaKnown RBP11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 IMP3Q9NV31 184 aaKnown RBP11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 DUS2Q9NX74 493 aaKnown RBP11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 VANGL2Q9ULK5 521 aa11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 HBS1LQ9Y450 684 aaKnown RBP11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 UMODL1Q5DID0 1318 aa11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 WNT10BO00744 389 aa11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 ZBTB39O15060 712 aa11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 CST8O60676 142 aa11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 NFATC1O95644 943 aa11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 CSH1P0DML2 217 aa11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 CSH2P0DML3 217 aa11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 AP1S2P56377 157 aa11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 PDIA5Q14554 519 aa11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 HMGB4Q8WW32 186 aa11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 UNKQ9C0B0 810 aaKnown RBP11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 PNPLA7Q6ZV29 1317 aa11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 H0Y858 1186 aa11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 TIMM44O43615 452 aa11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 KERAO60938 352 aa11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 SLC2A4P14672 509 aa11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 SBK1Q52WX2 424 aa11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 MSANTD1Q6ZTZ1 278 aa11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 SETD6Q8TBK2 473 aa11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 ADAM32Q8TC27 787 aa11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 CDADC1Q9BWV3 514 aa11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 MARCH2Q9P0N8 246 aa11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 BTBD3Q9Y2F9 522 aa11.14□□□□□ -0.63
CACNA1C-216ENST00000399638 FOXO4P98177 505 aa11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 MYBPC1Q00872 1141 aa11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 DDR1Q08345 913 aa11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 NT5DC1Q5TFE4 455 aa11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 ANO5Q75V66 913 aa11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 LMLNQ96KR4 655 aa11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 KLHL32Q96NJ5 620 aa11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 VPS45Q9NRW7 570 aa11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 ITGA11Q9UKX5 1188 aa11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 AOC2O75106 756 aa11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 JCHAINP01591 159 aa11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 ATP6V1B1P15313 513 aa11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 TNFRSF8P28908 595 aa11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 S100GP29377 79 aa11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 GPR15P49685 360 aa11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 LBX1P52954 281 aa11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 TXNRD3Q86VQ6 643 aa11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 PRSS58Q8IYP2 241 aa11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 KIRREL3Q8IZU9 778 aa11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 FEZF2Q8TBJ5 459 aa11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 SLC4A5Q9BY07 1137 aa11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 TNKS2Q9H2K2 1166 aa11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 MATN4O95460 622 aa11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 PABPC1P11940 636 aaKnown RBP11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 RASA1P20936 1047 aa11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 RAD23AP54725 363 aa11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 TTC39BQ5VTQ0 682 aaPredicted RBP11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 RASSF6Q6ZTQ3 369 aa11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 PACS2Q86VP3 889 aa11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 ZDHHC15Q96MV8 337 aa11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 TM6SF2Q9BZW4 377 aa11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 MANSC1Q9H8J5 431 aa11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 RNF121Q9H920 327 aa11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 PEX12O00623 359 aa11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 AIM2O14862 343 aa11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 RAD51BO15315 384 aa11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 SASH3O75995 380 aa11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 NTSR2O95665 410 aa11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 AGTP01019 485 aa11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 HSD3B1P14060 373 aa11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 CDH3P22223 829 aa11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 TAS2R50P59544 299 aa11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 MINDY4Q4G0A6 757 aa11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 USB1Q9BQ65 265 aaKnown RBP11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 C2orf49Q9BVC5 232 aaPredicted RBP11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 CCSER1Q9C0I3 900 aa11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 PIGUQ9H490 435 aa11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 DEC1Q9P2X7 70 aa11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 AMACRQ9UHK6 382 aa11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 ZNF232Q9UNY5 417 aa11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 SLIT1O75093 1534 aa11.13□□□□□ -0.63
CACNA1C-216ENST00000399638 CCDC22O60826 627 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms