RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 VANGL2Q9ULK5 521 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 TRPV2Q9Y5S1 764 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP2.77□□□□□ -1.97
CHD9-202ENST00000398510 MCIDASD6RGH6 385 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 CTIFO43310 598 aaKnown RBP2.77□□□□□ -1.97
CHD9-202ENST00000398510 TLX3O43711 291 aaPredicted RBP2.77□□□□□ -1.97
CHD9-202ENST00000398510 PEX14O75381 377 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 SNX4O95219 450 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 FGRP09769 529 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 TSPAN8P19075 237 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 VCAM1P19320 739 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 PTPN9P43378 593 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 RAD23BP54727 409 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 VBP1P61758 197 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 ERVK-9P63128 1117 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 ERVK-24P63145 666 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 C1QBPQ07021 282 aaKnown RBP2.77□□□□□ -1.97
CHD9-202ENST00000398510 ZNF543Q08ER8 600 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 MSLNQ13421 630 aaPredicted RBP2.77□□□□□ -1.97
CHD9-202ENST00000398510 MESDQ14696 234 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 SCARA3Q6AZY7 606 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 CHADLQ6NUI6 762 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 FOXR1Q6PIV2 292 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 RBM43Q6ZSC3 357 aaKnown RBP2.77□□□□□ -1.97
CHD9-202ENST00000398510 RD3Q7Z3Z2 195 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 UNC93AQ86WB7 457 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 NELFCDQ8IXH7 590 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 TPCN2Q8NHX9 752 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 B4GALNT2Q8NHY0 566 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 ANKRD49Q8WVL7 239 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 DDX1Q92499 740 aaKnown RBP2.77□□□□□ -1.97
CHD9-202ENST00000398510 USP7Q93009 1102 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 SCGB3A2Q96PL1 93 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 ZPBPQ9BS86 351 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 HEMGNQ9BXL5 484 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 DHX35Q9H5Z1 703 aaKnown RBP2.77□□□□□ -1.97
CHD9-202ENST00000398510 DMGDHQ9UI17 866 aaKnown RBP2.77□□□□□ -1.97
CHD9-202ENST00000398510 NAGPAQ9UK23 515 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 TRIM17Q9Y577 477 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 PCDHGB2Q9Y5G2 931 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 MAP1BP46821 2468 aaKnown RBP2.77□□□□□ -1.97
CHD9-202ENST00000398510 FAM47DPA6NHR8 397 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 LGALS16A8MUM7 142 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 E7ENQ6 273 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 PJA2O43164 708 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 NOL4O94818 638 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 CYP17A1P05093 508 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 APRTP07741 180 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 FGFR2P21802 821 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 OR1G1P47890 313 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 GUCY2DQ02846 1103 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 ITGB3BPQ13352 177 aaPredicted RBP2.77□□□□□ -1.97
CHD9-202ENST00000398510 CDO1Q16878 200 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 FAM153CQ494X1 144 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 INO80DQ53TQ3 878 aaPredicted RBP2.77□□□□□ -1.97
CHD9-202ENST00000398510 LCN1P1Q5VSP4 162 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 GRHL2Q6ISB3 625 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 HIBCHQ6NVY1 386 aaPredicted RBP2.77□□□□□ -1.97
CHD9-202ENST00000398510 POMGNT2Q8NAT1 580 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 RNASE11Q8TAA1 199 aaKnown RBP2.77□□□□□ -1.97
CHD9-202ENST00000398510 CXorf40AQ8TE69 158 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 POLR1EQ9GZS1 481 aaKnown RBP2.77□□□□□ -1.97
CHD9-202ENST00000398510 ILKAPQ9H0C8 392 aaPredicted RBP2.77□□□□□ -1.97
CHD9-202ENST00000398510 NEUROD4Q9HD90 331 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 ABHD10Q9NUJ1 306 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 NDUFA13Q9P0J0 144 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 WHRNQ9P202 907 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 SCML1Q9UN30 329 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 COQ6Q9Y2Z9 468 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 ZFC3H1O60293 1989 aaKnown RBP2.77□□□□□ -1.97
CHD9-202ENST00000398510 SCN9AQ15858 1988 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 SMIM35A0A1B0GVV1 85 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 BNIP3LO60238 219 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 B3GAT3O94766 335 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 SLC35G4P0C7Q5 338 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 CYP19A1P11511 503 aaPredicted RBP2.77□□□□□ -1.97
CHD9-202ENST00000398510 FLT3P36888 993 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 PRCPP42785 496 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 MAPKAPK2P49137 400 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 ZNF394Q53GI3 561 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 EFCAB12Q6NXP0 572 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 RAD9BQ6WBX8 426 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 ARHGAP12Q8IWW6 846 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 CCDC36Q8IYA8 594 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 MIER2Q8N344 545 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 PIK3C3Q8NEB9 887 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 NEDD1Q8NHV4 660 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 ENKURQ8TC29 256 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 KLHL6Q8WZ60 621 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 TRIM63Q969Q1 353 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 FAM162AQ96A26 154 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 ARHGAP39Q9C0H5 1083 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 RNF208Q9H0X6 261 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 DSN1Q9H410 356 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 EPB41L5Q9HCM4 733 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 SLC2A4RGQ9NR83 387 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 VPS45Q9NRW7 570 aa2.77□□□□□ -1.97
CHD9-202ENST00000398510 PHPT1Q9NRX4 125 aaPredicted RBP2.77□□□□□ -1.97
CHD9-202ENST00000398510 RCOR3Q9P2K3 495 aaPredicted RBP2.77□□□□□ -1.97
CHD9-202ENST00000398510 WARS2Q9UGM6 360 aaKnown RBP2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms