RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 TSC22D4Q9Y3Q8 395 aa16.3■□□□□ 0.2
CHMP1A-201ENST00000397901 SQORQ9Y6N5 450 aa16.3■□□□□ 0.2
CHMP1A-201ENST00000397901 ALDH1A2O94788 518 aa16.29■□□□□ 0.2
CHMP1A-201ENST00000397901 OCM2P0CE71 109 aa16.29■□□□□ 0.2
CHMP1A-201ENST00000397901 OCMP0CE72 109 aaPredicted RBP16.29■□□□□ 0.2
CHMP1A-201ENST00000397901 ERVK-10P10266 1014 aa16.29■□□□□ 0.2
CHMP1A-201ENST00000397901 TGFB3P10600 412 aa16.29■□□□□ 0.2
CHMP1A-201ENST00000397901 RALBP11234 206 aa16.29■□□□□ 0.2
CHMP1A-201ENST00000397901 IREB2P48200 963 aaKnown RBP16.29■□□□□ 0.2
CHMP1A-201ENST00000397901 RXRGP48443 463 aa16.29■□□□□ 0.2
CHMP1A-201ENST00000397901 ALDH3B2P48448 385 aa16.29■□□□□ 0.2
CHMP1A-201ENST00000397901 KCTD21Q4G0X4 260 aa16.29■□□□□ 0.2
CHMP1A-201ENST00000397901 STEAP4Q687X5 459 aa16.29■□□□□ 0.2
CHMP1A-201ENST00000397901 RWDD4Q6NW29 188 aaKnown RBP16.29■□□□□ 0.2
CHMP1A-201ENST00000397901 SLC2A7Q6PXP3 512 aa16.29■□□□□ 0.2
CHMP1A-201ENST00000397901 CMC1Q7Z7K0 106 aa16.29■□□□□ 0.2
CHMP1A-201ENST00000397901 TNS4Q8IZW8 715 aa16.29■□□□□ 0.2
CHMP1A-201ENST00000397901 PYROXD2Q8N2H3 581 aa16.29■□□□□ 0.2
CHMP1A-201ENST00000397901 TSPAN14Q8NG11 270 aa16.29■□□□□ 0.2
CHMP1A-201ENST00000397901 AGR3Q8TD06 166 aa16.29■□□□□ 0.2
CHMP1A-201ENST00000397901 ACMSDQ8TDX5 336 aa16.29■□□□□ 0.2
CHMP1A-201ENST00000397901 HTR3CQ8WXA8 447 aa16.29■□□□□ 0.2
CHMP1A-201ENST00000397901 OTUD5Q96G74 571 aa16.29■□□□□ 0.2
CHMP1A-201ENST00000397901 LRGUKQ96M69 825 aa16.29■□□□□ 0.2
CHMP1A-201ENST00000397901 SPATA33Q96N06 139 aa16.29■□□□□ 0.2
CHMP1A-201ENST00000397901 CSPG4P5Q96PW8 444 aa16.29■□□□□ 0.2
CHMP1A-201ENST00000397901 MRPL45Q9BRJ2 306 aaKnown RBP16.29■□□□□ 0.2
CHMP1A-201ENST00000397901 STN1Q9H668 368 aaKnown RBP16.29■□□□□ 0.2
CHMP1A-201ENST00000397901 VRTNQ9H8Y1 702 aa16.29■□□□□ 0.2
CHMP1A-201ENST00000397901 DNAJC28Q9NX36 388 aa16.29■□□□□ 0.2
CHMP1A-201ENST00000397901 DPP3Q9NY33 737 aa16.29■□□□□ 0.2
CHMP1A-201ENST00000397901 IGSF9Q9P2J2 1179 aa16.29■□□□□ 0.2
CHMP1A-201ENST00000397901 COPG2Q9UBF2 871 aa16.29■□□□□ 0.2
CHMP1A-201ENST00000397901 DCDC2Q9UHG0 476 aa16.29■□□□□ 0.2
CHMP1A-201ENST00000397901 DOLKQ9UPQ8 538 aa16.29■□□□□ 0.2
CHMP1A-201ENST00000397901 GNEQ9Y223 722 aaKnown RBP16.29■□□□□ 0.2
CHMP1A-201ENST00000397901 TRIM17Q9Y577 477 aa16.29■□□□□ 0.2
CHMP1A-201ENST00000397901 KLHL41O60662 606 aa16.29■□□□□ 0.2
CHMP1A-201ENST00000397901 TYK2P29597 1187 aa16.29■□□□□ 0.2
CHMP1A-201ENST00000397901 ABCE1P61221 599 aaKnown RBP16.29■□□□□ 0.2
CHMP1A-201ENST00000397901 STXBP5Q5T5C0 1151 aa16.29■□□□□ 0.2
CHMP1A-201ENST00000397901 CCDC185Q8N715 623 aa16.29■□□□□ 0.2
CHMP1A-201ENST00000397901 COLGALT1Q8NBJ5 622 aa16.29■□□□□ 0.2
CHMP1A-201ENST00000397901 ADCY4Q8NFM4 1077 aa16.29■□□□□ 0.2
CHMP1A-201ENST00000397901 EVPLQ92817 2033 aa16.29■□□□□ 0.2
CHMP1A-201ENST00000397901 BORCS5Q969J3 196 aa16.29■□□□□ 0.2
CHMP1A-201ENST00000397901 CMTM5Q96DZ9 223 aa16.29■□□□□ 0.2
CHMP1A-201ENST00000397901 NUF2Q9BZD4 464 aa16.29■□□□□ 0.2
CHMP1A-201ENST00000397901 PDZD7Q9H5P4 517 aa16.29■□□□□ 0.2
CHMP1A-201ENST00000397901 MTMR10Q9NXD2 777 aa16.29■□□□□ 0.2
CHMP1A-201ENST00000397901 SEPT10Q9P0V9 454 aa16.29■□□□□ 0.2
CHMP1A-201ENST00000397901 CLEC11AQ9Y240 323 aa16.29■□□□□ 0.2
CHMP1A-201ENST00000397901 A0A087WZ62 844 aa16.28■□□□□ 0.2
CHMP1A-201ENST00000397901 ZNF195O14628 629 aa16.28■□□□□ 0.2
CHMP1A-201ENST00000397901 TRPA1O75762 1119 aa16.28■□□□□ 0.2
CHMP1A-201ENST00000397901 PGK2P07205 417 aa16.28■□□□□ 0.2
CHMP1A-201ENST00000397901 GOT1P17174 413 aa16.28■□□□□ 0.2
CHMP1A-201ENST00000397901 ACAT1P24752 427 aaKnown RBP16.28■□□□□ 0.2
CHMP1A-201ENST00000397901 DPYSL2Q16555 572 aa16.28■□□□□ 0.2
CHMP1A-201ENST00000397901 CCDC153Q494R4 210 aa16.28■□□□□ 0.2
CHMP1A-201ENST00000397901 NCBP2-AS2Q69YL0 99 aa16.28■□□□□ 0.2
CHMP1A-201ENST00000397901 DCDC5Q6ZRR9 648 aa16.28■□□□□ 0.2
CHMP1A-201ENST00000397901 TICAM1Q8IUC6 712 aa16.28■□□□□ 0.2
CHMP1A-201ENST00000397901 NEURL2Q9BR09 285 aa16.28■□□□□ 0.2
CHMP1A-201ENST00000397901 FDXACB1Q9BRP7 624 aaPredicted RBP16.28■□□□□ 0.2
CHMP1A-201ENST00000397901 PRMT7Q9NVM4 692 aaPredicted RBP16.28■□□□□ 0.2
CHMP1A-201ENST00000397901 SYBUQ9NX95 663 aa16.28■□□□□ 0.2
CHMP1A-201ENST00000397901 TXNDC16Q9P2K2 825 aa16.28■□□□□ 0.2
CHMP1A-201ENST00000397901 GPC6Q9Y625 555 aaPredicted RBP16.28■□□□□ 0.2
CHMP1A-201ENST00000397901 A0A0A0MRY4 1105 aa16.28■□□□□ 0.2
CHMP1A-201ENST00000397901 SOCS7O14512 581 aa16.28■□□□□ 0.2
CHMP1A-201ENST00000397901 CXCL11O14625 94 aa16.28■□□□□ 0.2
CHMP1A-201ENST00000397901 LSM1O15116 133 aaKnown RBP16.28■□□□□ 0.2
CHMP1A-201ENST00000397901 GRK2P25098 689 aa16.28■□□□□ 0.2
CHMP1A-201ENST00000397901 HMOX2P30519 316 aa16.28■□□□□ 0.2
CHMP1A-201ENST00000397901 RBP5P82980 135 aa16.28■□□□□ 0.2
CHMP1A-201ENST00000397901 OLIG2Q13516 323 aa16.28■□□□□ 0.2
CHMP1A-201ENST00000397901 ERO1BQ86YB8 467 aa16.28■□□□□ 0.2
CHMP1A-201ENST00000397901 ARNTL2Q8WYA1 636 aa16.28■□□□□ 0.2
CHMP1A-201ENST00000397901 PGBD4Q96DM1 585 aa16.28■□□□□ 0.2
CHMP1A-201ENST00000397901 SPATA13Q96N96 652 aa16.28■□□□□ 0.2
CHMP1A-201ENST00000397901 KCNK16Q96T55 309 aa16.28■□□□□ 0.2
CHMP1A-201ENST00000397901 SLC4A5Q9BY07 1137 aa16.28■□□□□ 0.2
CHMP1A-201ENST00000397901 SLC2A11Q9BYW1 496 aa16.28■□□□□ 0.2
CHMP1A-201ENST00000397901 SOBPA7XYQ1 873 aa16.27■□□□□ 0.2
CHMP1A-201ENST00000397901 HCRTO43612 131 aa16.27■□□□□ 0.2
CHMP1A-201ENST00000397901 ZBTB14O43829 449 aa16.27■□□□□ 0.2
CHMP1A-201ENST00000397901 TFPTP0C1Z6 253 aa16.27■□□□□ 0.2
CHMP1A-201ENST00000397901 MCF2P10911 925 aa16.27■□□□□ 0.2
CHMP1A-201ENST00000397901 CD1EP15812 388 aa16.27■□□□□ 0.2
CHMP1A-201ENST00000397901 PRDX6P30041 224 aa16.27■□□□□ 0.2
CHMP1A-201ENST00000397901 GTF2A2P52657 109 aa16.27■□□□□ 0.2
CHMP1A-201ENST00000397901 ADGRE1Q14246 886 aa16.27■□□□□ 0.2
CHMP1A-201ENST00000397901 ANKDD1AQ495B1 522 aa16.27■□□□□ 0.2
CHMP1A-201ENST00000397901 CELF3Q5SZQ8 465 aaKnown RBP16.27■□□□□ 0.2
CHMP1A-201ENST00000397901 C6orf52Q5T4I8 152 aa16.27■□□□□ 0.2
CHMP1A-201ENST00000397901 C7orf31Q8N865 590 aa16.27■□□□□ 0.2
CHMP1A-201ENST00000397901 ASB7Q9H672 318 aa16.27■□□□□ 0.2
CHMP1A-201ENST00000397901 SNX9Q9Y5X1 595 aa16.27■□□□□ 0.2
CHMP1A-201ENST00000397901 COX4I1P13073 169 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms