RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 ALFQ53S48 1182 aa19.79■□□□□ 0.76
PDLIM2-204ENST00000397760 CCNYQ8ND76 341 aa19.79■□□□□ 0.76
PDLIM2-204ENST00000397760 LGMNQ99538 433 aa19.79■□□□□ 0.76
PDLIM2-204ENST00000397760 PLCD4Q9BRC7 762 aa19.79■□□□□ 0.76
PDLIM2-204ENST00000397760 SMG9Q9H0W8 520 aaKnown RBP19.79■□□□□ 0.76
PDLIM2-204ENST00000397760 PCDH9Q9HC56 1237 aa19.79■□□□□ 0.76
PDLIM2-204ENST00000397760 NDFIP2Q9NV92 336 aa19.79■□□□□ 0.76
PDLIM2-204ENST00000397760 CFAP97Q9P2B7 532 aa19.79■□□□□ 0.76
PDLIM2-204ENST00000397760 STOML2Q9UJZ1 356 aa19.79■□□□□ 0.76
PDLIM2-204ENST00000397760 LSM7Q9UK45 103 aaKnown RBP19.79■□□□□ 0.76
PDLIM2-204ENST00000397760 ARHGAP26Q9UNA1 814 aa19.79■□□□□ 0.76
PDLIM2-204ENST00000397760 MRPS23Q9Y3D9 190 aaKnown RBP19.79■□□□□ 0.76
PDLIM2-204ENST00000397760 SH3BP1Q9Y3L3 701 aa19.79■□□□□ 0.76
PDLIM2-204ENST00000397760 NCAM2O15394 837 aa19.78■□□□□ 0.76
PDLIM2-204ENST00000397760 GLP2RO95838 553 aa19.78■□□□□ 0.76
PDLIM2-204ENST00000397760 MX2P20592 715 aa19.78■□□□□ 0.76
PDLIM2-204ENST00000397760 SLCO1A2P46721 670 aa19.78■□□□□ 0.76
PDLIM2-204ENST00000397760 RARS2Q5T160 578 aaKnown RBP19.78■□□□□ 0.76
PDLIM2-204ENST00000397760 TMEM184AQ6ZMB5 413 aa19.78■□□□□ 0.76
PDLIM2-204ENST00000397760 Q6ZNB5 142 aa19.78■□□□□ 0.76
PDLIM2-204ENST00000397760 TFAP2DQ7Z6R9 452 aa19.78■□□□□ 0.76
PDLIM2-204ENST00000397760 CIR1Q86X95 450 aaPredicted RBP19.78■□□□□ 0.76
PDLIM2-204ENST00000397760 LRRC34Q8IZ02 419 aa19.78■□□□□ 0.76
PDLIM2-204ENST00000397760 EFHBQ8N7U6 833 aa19.78■□□□□ 0.76
PDLIM2-204ENST00000397760 TMEM248Q9NWD8 314 aa19.78■□□□□ 0.76
PDLIM2-204ENST00000397760 DONSONQ9NYP3 566 aa19.78■□□□□ 0.76
PDLIM2-204ENST00000397760 LEFTY2O00292 366 aa19.77■□□□□ 0.76
PDLIM2-204ENST00000397760 TRDMT1O14717 391 aaKnown RBP19.77■□□□□ 0.76
PDLIM2-204ENST00000397760 SCAMP3O14828 347 aaKnown RBP19.77■□□□□ 0.76
PDLIM2-204ENST00000397760 LINC01565O15544 149 aa19.77■□□□□ 0.76
PDLIM2-204ENST00000397760 CDH16O75309 829 aa19.77■□□□□ 0.76
PDLIM2-204ENST00000397760 ACSL3O95573 720 aa19.77■□□□□ 0.76
PDLIM2-204ENST00000397760 CEBPBP17676 345 aa19.77■□□□□ 0.76
PDLIM2-204ENST00000397760 CHKAP35790 457 aa19.77■□□□□ 0.76
PDLIM2-204ENST00000397760 SCTRP47872 440 aa19.77■□□□□ 0.76
PDLIM2-204ENST00000397760 GALNT2Q10471 571 aa19.77■□□□□ 0.76
PDLIM2-204ENST00000397760 AP1B1Q10567 949 aa19.77■□□□□ 0.76
PDLIM2-204ENST00000397760 C5orf22Q49AR2 442 aa19.77■□□□□ 0.76
PDLIM2-204ENST00000397760 RABGAP1LQ5R372 815 aa19.77■□□□□ 0.76
PDLIM2-204ENST00000397760 CFAP52Q8N1V2 620 aa19.77■□□□□ 0.76
PDLIM2-204ENST00000397760 ING5Q8WYH8 240 aa19.77■□□□□ 0.76
PDLIM2-204ENST00000397760 ATG2AQ2TAZ0 1938 aa19.77■□□□□ 0.76
PDLIM2-204ENST00000397760 NRLP54845 237 aa19.76■□□□□ 0.75
PDLIM2-204ENST00000397760 NR1H3Q13133 447 aa19.76■□□□□ 0.75
PDLIM2-204ENST00000397760 PRKD1Q15139 912 aaPredicted RBP19.76■□□□□ 0.75
PDLIM2-204ENST00000397760 LONRF1Q17RB8 773 aa19.76■□□□□ 0.75
PDLIM2-204ENST00000397760 UBAP2Q5T6F2 1119 aaKnown RBP19.76■□□□□ 0.75
PDLIM2-204ENST00000397760 HEATR6Q6AI08 1181 aaKnown RBP19.76■□□□□ 0.75
PDLIM2-204ENST00000397760 HIBCHQ6NVY1 386 aaPredicted RBP19.76■□□□□ 0.75
PDLIM2-204ENST00000397760 HTR3DQ70Z44 454 aa19.76■□□□□ 0.75
PDLIM2-204ENST00000397760 ARHGAP12Q8IWW6 846 aa19.76■□□□□ 0.75
PDLIM2-204ENST00000397760 ZCCHC9Q8N567 271 aaKnown RBP19.76■□□□□ 0.75
PDLIM2-204ENST00000397760 UHMK1Q8TAS1 419 aaKnown RBP19.76■□□□□ 0.75
PDLIM2-204ENST00000397760 ITFG1Q8TB96 612 aa19.76■□□□□ 0.75
PDLIM2-204ENST00000397760 SH3RF2Q8TEC5 729 aa19.76■□□□□ 0.75
PDLIM2-204ENST00000397760 TTC25Q96NG3 672 aa19.76■□□□□ 0.75
PDLIM2-204ENST00000397760 APOL5Q9BWW9 433 aa19.76■□□□□ 0.75
PDLIM2-204ENST00000397760 SLC39A8Q9C0K1 460 aa19.76■□□□□ 0.75
PDLIM2-204ENST00000397760 BRD8Q9H0E9 1235 aa19.76■□□□□ 0.75
PDLIM2-204ENST00000397760 PPCSQ9HAB8 311 aa19.76■□□□□ 0.75
PDLIM2-204ENST00000397760 SLC40A1Q9NP59 571 aa19.76■□□□□ 0.75
PDLIM2-204ENST00000397760 KLC4Q9NSK0 619 aa19.76■□□□□ 0.75
PDLIM2-204ENST00000397760 NINJ2Q9NZG7 142 aa19.76■□□□□ 0.75
PDLIM2-204ENST00000397760 ZMYM5Q9UJ78 669 aa19.76■□□□□ 0.75
PDLIM2-204ENST00000397760 ZFP37Q9Y6Q3 630 aaPredicted RBP19.76■□□□□ 0.75
PDLIM2-204ENST00000397760 OBSL1O75147 1896 aa19.76■□□□□ 0.75
PDLIM2-204ENST00000397760 DFFAO00273 331 aa19.76■□□□□ 0.75
PDLIM2-204ENST00000397760 TSPAN3O60637 253 aa19.76■□□□□ 0.75
PDLIM2-204ENST00000397760 RPL22P35268 128 aaKnown RBP19.76■□□□□ 0.75
PDLIM2-204ENST00000397760 GARSP41250 739 aaKnown RBP19.76■□□□□ 0.75
PDLIM2-204ENST00000397760 GPS1Q13098 491 aa19.76■□□□□ 0.75
PDLIM2-204ENST00000397760 HTR3CQ8WXA8 447 aa19.76■□□□□ 0.75
PDLIM2-204ENST00000397760 RTP4Q96DX8 246 aa19.76■□□□□ 0.75
PDLIM2-204ENST00000397760 PRICKLE1Q96MT3 831 aaPredicted RBP19.76■□□□□ 0.75
PDLIM2-204ENST00000397760 TDP1Q9NUW8 608 aa19.76■□□□□ 0.75
PDLIM2-204ENST00000397760 LMCD1Q9NZU5 365 aa19.76■□□□□ 0.75
PDLIM2-204ENST00000397760 CCL26Q9Y258 94 aa19.76■□□□□ 0.75
PDLIM2-204ENST00000397760 ZNF510Q9Y2H8 683 aa19.76■□□□□ 0.75
PDLIM2-204ENST00000397760 TRANK1O15050 2925 aa19.75■□□□□ 0.75
PDLIM2-204ENST00000397760 CDH23Q9H251 3354 aa19.75■□□□□ 0.75
PDLIM2-204ENST00000397760 A0A1W2PPC1 479 aa19.75■□□□□ 0.75
PDLIM2-204ENST00000397760 VIMP08670 466 aaKnown RBP19.75■□□□□ 0.75
PDLIM2-204ENST00000397760 VAV1P15498 845 aa19.75■□□□□ 0.75
PDLIM2-204ENST00000397760 RPS24P62847 133 aaKnown RBP19.75■□□□□ 0.75
PDLIM2-204ENST00000397760 PPIDQ08752 370 aaKnown RBP19.75■□□□□ 0.75
PDLIM2-204ENST00000397760 CBX2Q14781 532 aaPredicted RBP19.75■□□□□ 0.75
PDLIM2-204ENST00000397760 AFMIDQ63HM1 303 aa19.75■□□□□ 0.75
PDLIM2-204ENST00000397760 UMODL1-AS1Q8N2C9 162 aa19.75■□□□□ 0.75
PDLIM2-204ENST00000397760 GBP7Q8N8V2 638 aaPredicted RBP19.75■□□□□ 0.75
PDLIM2-204ENST00000397760 MAGEC3Q8TD91 643 aa19.75■□□□□ 0.75
PDLIM2-204ENST00000397760 USP13Q92995 863 aaPredicted RBP19.75■□□□□ 0.75
PDLIM2-204ENST00000397760 HDAC11Q96DB2 347 aa19.75■□□□□ 0.75
PDLIM2-204ENST00000397760 SGSM3Q96HU1 749 aa19.75■□□□□ 0.75
PDLIM2-204ENST00000397760 ZSWIM3Q96MP5 696 aa19.75■□□□□ 0.75
PDLIM2-204ENST00000397760 FERMT1Q9BQL6 677 aa19.75■□□□□ 0.75
PDLIM2-204ENST00000397760 ZNF212Q9UDV6 495 aa19.75■□□□□ 0.75
PDLIM2-204ENST00000397760 TMEM120BA0PK00 339 aa19.74■□□□□ 0.75
PDLIM2-204ENST00000397760 SNX3O60493 162 aa19.74■□□□□ 0.75
PDLIM2-204ENST00000397760 NDST2P52849 883 aa19.74■□□□□ 0.75
PDLIM2-204ENST00000397760 MLLT1Q03111 559 aaPredicted RBP19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms