RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 CNBD2Q96M20 576 aa5.13□□□□□ -1.59
SSR1-202ENST00000397511 OSMRQ99650 979 aa5.13□□□□□ -1.59
SSR1-202ENST00000397511 CNPY3Q9BT09 278 aa5.13□□□□□ -1.59
SSR1-202ENST00000397511 BCO2Q9BYV7 579 aa5.13□□□□□ -1.59
SSR1-202ENST00000397511 NUF2Q9BZD4 464 aa5.13□□□□□ -1.59
SSR1-202ENST00000397511 FOXP3Q9BZS1 431 aa5.13□□□□□ -1.59
SSR1-202ENST00000397511 PAIP1Q9H074 479 aaKnown RBP5.13□□□□□ -1.59
SSR1-202ENST00000397511 C2orf40Q9H1Z8 148 aa5.13□□□□□ -1.59
SSR1-202ENST00000397511 VPS11Q9H270 941 aa5.13□□□□□ -1.59
SSR1-202ENST00000397511 SMARCAD1Q9H4L7 1026 aa5.13□□□□□ -1.59
SSR1-202ENST00000397511 CYP4F11Q9HBI6 524 aa5.13□□□□□ -1.59
SSR1-202ENST00000397511 ERAP1Q9NZ08 941 aa5.13□□□□□ -1.59
SSR1-202ENST00000397511 UBP1Q9NZI7 540 aa5.13□□□□□ -1.59
SSR1-202ENST00000397511 UNC80Q8N2C7 3258 aa5.13□□□□□ -1.59
SSR1-202ENST00000397511 DOCK1Q14185 1865 aa5.13□□□□□ -1.59
SSR1-202ENST00000397511 CAPN8A6NHC0 703 aa5.13□□□□□ -1.59
SSR1-202ENST00000397511 SLC15A5A6NIM6 579 aa5.13□□□□□ -1.59
SSR1-202ENST00000397511 SOBPA7XYQ1 873 aa5.13□□□□□ -1.59
SSR1-202ENST00000397511 FAM47E-STBD1D6RA91 191 aa5.13□□□□□ -1.59
SSR1-202ENST00000397511 CASQ2O14958 399 aaPredicted RBP5.13□□□□□ -1.59
SSR1-202ENST00000397511 TM9SF1O15321 606 aa5.13□□□□□ -1.59
SSR1-202ENST00000397511 ZMPSTE24O75844 475 aa5.13□□□□□ -1.59
SSR1-202ENST00000397511 C22orf31O95567 290 aa5.13□□□□□ -1.59
SSR1-202ENST00000397511 LGALS2P05162 132 aa5.13□□□□□ -1.59
SSR1-202ENST00000397511 DLDP09622 509 aaKnown RBP5.13□□□□□ -1.59
SSR1-202ENST00000397511 TFPTP0C1Z6 253 aa5.13□□□□□ -1.59
SSR1-202ENST00000397511 HSPA8P11142 646 aaKnown RBP5.13□□□□□ -1.59
SSR1-202ENST00000397511 ZNF16P17020 682 aaPredicted RBP5.13□□□□□ -1.59
SSR1-202ENST00000397511 PROZP22891 400 aa5.13□□□□□ -1.59
SSR1-202ENST00000397511 NDUFV1P49821 464 aa5.13□□□□□ -1.59
SSR1-202ENST00000397511 C21orf59P57076 290 aa5.13□□□□□ -1.59
SSR1-202ENST00000397511 RPL10AP62906 217 aaKnown RBP5.13□□□□□ -1.59
SSR1-202ENST00000397511 KCNJ11Q14654 390 aa5.13□□□□□ -1.59
SSR1-202ENST00000397511 SOWAHAQ2M3V2 549 aa5.13□□□□□ -1.59
SSR1-202ENST00000397511 ARL13BQ3SXY8 428 aa5.13□□□□□ -1.59
SSR1-202ENST00000397511 DCAF6Q58WW2 860 aa5.13□□□□□ -1.59
SSR1-202ENST00000397511 RABGAP1LQ5R372 815 aa5.13□□□□□ -1.59
SSR1-202ENST00000397511 PRAMEF19Q5SWL8 479 aa5.13□□□□□ -1.59
SSR1-202ENST00000397511 ARMCX2Q7L311 632 aa5.13□□□□□ -1.59
SSR1-202ENST00000397511 KDELC2Q7Z4H8 507 aa5.13□□□□□ -1.59
SSR1-202ENST00000397511 SLC26A11Q86WA9 606 aa5.13□□□□□ -1.59
SSR1-202ENST00000397511 TNS4Q8IZW8 715 aa5.13□□□□□ -1.59
SSR1-202ENST00000397511 CATSPER1Q8NEC5 780 aa5.13□□□□□ -1.59
SSR1-202ENST00000397511 PPP4R1Q8TF05 950 aa5.13□□□□□ -1.59
SSR1-202ENST00000397511 SLC44A1Q8WWI5 657 aa5.13□□□□□ -1.59
SSR1-202ENST00000397511 MCRS1Q96EZ8 462 aa5.13□□□□□ -1.59
SSR1-202ENST00000397511 DCUN1D1Q96GG9 259 aa5.13□□□□□ -1.59
SSR1-202ENST00000397511 APOPT1Q96IL0 206 aa5.13□□□□□ -1.59
SSR1-202ENST00000397511 KLC2Q9H0B6 622 aa5.13□□□□□ -1.59
SSR1-202ENST00000397511 C1orf21Q9H246 121 aa5.13□□□□□ -1.59
SSR1-202ENST00000397511 LHX5Q9H2C1 402 aa5.13□□□□□ -1.59
SSR1-202ENST00000397511 MRPL46Q9H2W6 279 aaKnown RBP5.13□□□□□ -1.59
SSR1-202ENST00000397511 NXF3Q9H4D5 531 aaKnown RBP5.13□□□□□ -1.59
SSR1-202ENST00000397511 PLAC1Q9HBJ0 212 aa5.13□□□□□ -1.59
SSR1-202ENST00000397511 MAN1C1Q9NR34 630 aa5.13□□□□□ -1.59
SSR1-202ENST00000397511 IGSF9Q9P2J2 1179 aa5.13□□□□□ -1.59
SSR1-202ENST00000397511 PRELID1Q9Y255 219 aa5.13□□□□□ -1.59
SSR1-202ENST00000397511 TNFSF13BQ9Y275 285 aa5.13□□□□□ -1.59
SSR1-202ENST00000397511 TIMM22Q9Y584 194 aa5.13□□□□□ -1.59
SSR1-202ENST00000397511 TIMM13Q9Y5L4 95 aaPredicted RBP5.13□□□□□ -1.59
SSR1-202ENST00000397511 PSAT1Q9Y617 370 aa5.13□□□□□ -1.59
SSR1-202ENST00000397511 PAPPA2Q9BXP8 1791 aa5.13□□□□□ -1.59
SSR1-202ENST00000397511 XIRP2A4UGR9 3374 aa5.13□□□□□ -1.59
SSR1-202ENST00000397511 A0A088AWK7 358 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 CAPN14A8MX76 684 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 H3BNX3 289 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 H3BRB1 525 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 I3L4J1 428 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 K7EPI3 171 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 PFDN6O15212 129 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 HBP1O60381 514 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 DNAJA2O60884 412 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 CNMDO75829 334 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 KRT37O76014 449 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 FUCA1P04066 466 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 ERVK-10P10266 1014 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 VDRP11473 427 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 RAG1P15918 1043 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 EDNRBP24530 442 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 ALDH1A3P47895 512 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 HSPA13P48723 471 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 ATXN3P54252 364 aaPredicted RBP5.12□□□□□ -1.59
SSR1-202ENST00000397511 IFRD2Q12894 506 aaPredicted RBP5.12□□□□□ -1.59
SSR1-202ENST00000397511 TTLL4Q14679 1199 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 PRKD1Q15139 912 aaPredicted RBP5.12□□□□□ -1.59
SSR1-202ENST00000397511 SURF1Q15526 300 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 ZNF829Q3KNS6 432 aaPredicted RBP5.12□□□□□ -1.59
SSR1-202ENST00000397511 USP41Q3LFD5 358 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 OGFRL1Q5TC84 451 aaPredicted RBP5.12□□□□□ -1.59
SSR1-202ENST00000397511 TTC39BQ5VTQ0 682 aaPredicted RBP5.12□□□□□ -1.59
SSR1-202ENST00000397511 IL23RQ5VWK5 629 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 HEATR6Q6AI08 1181 aaKnown RBP5.12□□□□□ -1.59
SSR1-202ENST00000397511 LZTR1Q8N653 840 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 GSDMBQ8TAX9 411 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 SLC2A14Q8TDB8 520 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 USP33Q8TEY7 942 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 E2F7Q96AV8 911 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 PGBD4Q96DM1 585 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 SGF29Q96ES7 293 aa5.12□□□□□ -1.59
SSR1-202ENST00000397511 PRMT7Q9NVM4 692 aaPredicted RBP5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms