RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 TEX44Q53QW1 395 aa10.64□□□□□ -0.71
CPSF1P1-201ENST00000397477 RIPOR1Q6ZS17 1223 aa10.64□□□□□ -0.71
CPSF1P1-201ENST00000397477 CIR1Q86X95 450 aaPredicted RBP10.64□□□□□ -0.71
CPSF1P1-201ENST00000397477 ZNF781Q8N8C0 355 aa10.64□□□□□ -0.71
CPSF1P1-201ENST00000397477 CATSPER2Q96P56 530 aa10.64□□□□□ -0.71
CPSF1P1-201ENST00000397477 GDAP2Q9NXN4 497 aa10.64□□□□□ -0.71
CPSF1P1-201ENST00000397477 NDE1Q9NXR1 346 aa10.64□□□□□ -0.71
CPSF1P1-201ENST00000397477 HMX2A2RU54 273 aa10.63□□□□□ -0.71
CPSF1P1-201ENST00000397477 ENO4A6NNW6 628 aa10.63□□□□□ -0.71
CPSF1P1-201ENST00000397477 TSPAN3O60637 253 aa10.63□□□□□ -0.71
CPSF1P1-201ENST00000397477 PAGE1O75459 146 aa10.63□□□□□ -0.71
CPSF1P1-201ENST00000397477 GPC4O75487 556 aa10.63□□□□□ -0.71
CPSF1P1-201ENST00000397477 ZNF865P0CJ78 1059 aaPredicted RBP10.63□□□□□ -0.71
CPSF1P1-201ENST00000397477 WARSP23381 471 aaKnown RBP10.63□□□□□ -0.71
CPSF1P1-201ENST00000397477 MPSTP25325 297 aa10.63□□□□□ -0.71
CPSF1P1-201ENST00000397477 SLC18A1P54219 525 aa10.63□□□□□ -0.71
CPSF1P1-201ENST00000397477 PRAMEP78395 509 aa10.63□□□□□ -0.71
CPSF1P1-201ENST00000397477 MMEL1Q495T6 779 aa10.63□□□□□ -0.71
CPSF1P1-201ENST00000397477 ESRP1Q6NXG1 681 aaKnown RBP10.63□□□□□ -0.71
CPSF1P1-201ENST00000397477 TMEM154Q6P9G4 183 aa10.63□□□□□ -0.71
CPSF1P1-201ENST00000397477 KYAT3Q6YP21 454 aaKnown RBP10.63□□□□□ -0.71
CPSF1P1-201ENST00000397477 RPS27LQ71UM5 84 aaKnown RBP10.63□□□□□ -0.71
CPSF1P1-201ENST00000397477 ATAD1Q8NBU5 361 aa10.63□□□□□ -0.71
CPSF1P1-201ENST00000397477 FAXDC2Q96IV6 333 aa10.63□□□□□ -0.71
CPSF1P1-201ENST00000397477 ZFYVE28Q9HCC9 887 aa10.63□□□□□ -0.71
CPSF1P1-201ENST00000397477 TMLHEQ9NVH6 421 aa10.63□□□□□ -0.71
CPSF1P1-201ENST00000397477 FETUBQ9UGM5 382 aa10.63□□□□□ -0.71
CPSF1P1-201ENST00000397477 ZNF180Q9UJW8 692 aa10.63□□□□□ -0.71
CPSF1P1-201ENST00000397477 PSMG1O95456 288 aa10.63□□□□□ -0.71
CPSF1P1-201ENST00000397477 STAU1O95793 577 aaKnown RBP10.63□□□□□ -0.71
CPSF1P1-201ENST00000397477 F9P00740 461 aa10.63□□□□□ -0.71
CPSF1P1-201ENST00000397477 SKIP12755 728 aa10.63□□□□□ -0.71
CPSF1P1-201ENST00000397477 GPR15P49685 360 aa10.63□□□□□ -0.71
CPSF1P1-201ENST00000397477 FLT3LGP49771 235 aa10.63□□□□□ -0.71
CPSF1P1-201ENST00000397477 GSCP56915 257 aaPredicted RBP10.63□□□□□ -0.71
CPSF1P1-201ENST00000397477 ABCE1P61221 599 aaKnown RBP10.63□□□□□ -0.71
CPSF1P1-201ENST00000397477 PURAQ00577 322 aaKnown RBP10.63□□□□□ -0.71
CPSF1P1-201ENST00000397477 CDH17Q12864 832 aa10.63□□□□□ -0.71
CPSF1P1-201ENST00000397477 CAPRIN2Q6IMN6 1127 aaKnown RBP10.63□□□□□ -0.71
CPSF1P1-201ENST00000397477 TMPRSS6Q8IU80 811 aa10.63□□□□□ -0.71
CPSF1P1-201ENST00000397477 PPHLN1Q8NEY8 458 aaKnown RBP10.63□□□□□ -0.71
CPSF1P1-201ENST00000397477 BLOC1S5Q8TDH9 187 aa10.63□□□□□ -0.71
CPSF1P1-201ENST00000397477 EMID1Q96A84 441 aaPredicted RBP10.63□□□□□ -0.71
CPSF1P1-201ENST00000397477 NAT9Q9BTE0 207 aa10.63□□□□□ -0.71
CPSF1P1-201ENST00000397477 CNGB3Q9NQW8 809 aa10.63□□□□□ -0.71
CPSF1P1-201ENST00000397477 COPG2Q9UBF2 871 aa10.63□□□□□ -0.71
CPSF1P1-201ENST00000397477 SLC2A6Q9UGQ3 507 aa10.63□□□□□ -0.71
CPSF1P1-201ENST00000397477 FBXW11Q9UKB1 542 aa10.63□□□□□ -0.71
CPSF1P1-201ENST00000397477 GNEQ9Y223 722 aaKnown RBP10.63□□□□□ -0.71
CPSF1P1-201ENST00000397477 CCDC160A6NGH7 325 aa10.63□□□□□ -0.71
CPSF1P1-201ENST00000397477 SORBS2O94875 1100 aaKnown RBP10.63□□□□□ -0.71
CPSF1P1-201ENST00000397477 PIGNO95427 931 aa10.63□□□□□ -0.71
CPSF1P1-201ENST00000397477 HNRNPLP14866 589 aaKnown RBP eCLIP10.63□□□□□ -0.71
CPSF1P1-201ENST00000397477 KCNE1P15382 129 aa10.63□□□□□ -0.71
CPSF1P1-201ENST00000397477 COG7P83436 770 aa10.63□□□□□ -0.71
CPSF1P1-201ENST00000397477 FBXO48Q5FWF7 155 aa10.63□□□□□ -0.71
CPSF1P1-201ENST00000397477 SPANXN3Q5MJ09 141 aa10.63□□□□□ -0.71
CPSF1P1-201ENST00000397477 C10orf120Q5SQS8 335 aa10.63□□□□□ -0.71
CPSF1P1-201ENST00000397477 WLSQ5T9L3 541 aa10.63□□□□□ -0.71
CPSF1P1-201ENST00000397477 AGMOQ6ZNB7 445 aa10.63□□□□□ -0.71
CPSF1P1-201ENST00000397477 ZMIZ2Q8NF64 920 aa10.63□□□□□ -0.71
CPSF1P1-201ENST00000397477 CPNE1Q99829 537 aa10.63□□□□□ -0.71
CPSF1P1-201ENST00000397477 PLAC1Q9HBJ0 212 aa10.63□□□□□ -0.71
CPSF1P1-201ENST00000397477 ARHGEF38Q9NXL2 777 aa10.63□□□□□ -0.71
CPSF1P1-201ENST00000397477 CRYL1Q9Y2S2 319 aa10.63□□□□□ -0.71
CPSF1P1-201ENST00000397477 UBA6A0AVT1 1052 aaPredicted RBP10.62□□□□□ -0.71
CPSF1P1-201ENST00000397477 NEMP2A6NFY4 417 aa10.62□□□□□ -0.71
CPSF1P1-201ENST00000397477 TRPA1O75762 1119 aa10.62□□□□□ -0.71
CPSF1P1-201ENST00000397477 ASGR1P07306 291 aa10.62□□□□□ -0.71
CPSF1P1-201ENST00000397477 CHRM1P11229 460 aaPredicted RBP10.62□□□□□ -0.71
CPSF1P1-201ENST00000397477 PKNOX1P55347 436 aa10.62□□□□□ -0.71
CPSF1P1-201ENST00000397477 ART3Q13508 389 aa10.62□□□□□ -0.71
CPSF1P1-201ENST00000397477 GRTP1Q5TC63 336 aa10.62□□□□□ -0.71
CPSF1P1-201ENST00000397477 CES4AQ5XG92 561 aa10.62□□□□□ -0.71
CPSF1P1-201ENST00000397477 GLB1LQ6UWU2 654 aa10.62□□□□□ -0.71
CPSF1P1-201ENST00000397477 ZNF467Q7Z7K2 595 aaPredicted RBP10.62□□□□□ -0.71
CPSF1P1-201ENST00000397477 ARNTL2Q8WYA1 636 aa10.62□□□□□ -0.71
CPSF1P1-201ENST00000397477 RPRD1AQ96P16 312 aaPredicted RBP10.62□□□□□ -0.71
CPSF1P1-201ENST00000397477 COG4Q9H9E3 785 aa10.62□□□□□ -0.71
CPSF1P1-201ENST00000397477 ADA2Q9NZK5 511 aa10.62□□□□□ -0.71
CPSF1P1-201ENST00000397477 CDH9Q9ULB4 789 aa10.62□□□□□ -0.71
CPSF1P1-201ENST00000397477 A0A1W2PQH9 124 aa10.62□□□□□ -0.71
CPSF1P1-201ENST00000397477 RBM47A0AV96 593 aaKnown RBP10.62□□□□□ -0.71
CPSF1P1-201ENST00000397477 TBX10O75333 385 aa10.62□□□□□ -0.71
CPSF1P1-201ENST00000397477 AP2A1O95782 977 aa10.62□□□□□ -0.71
CPSF1P1-201ENST00000397477 LMNAP02545 664 aaKnown RBP10.62□□□□□ -0.71
CPSF1P1-201ENST00000397477 CCR1P32246 355 aa10.62□□□□□ -0.71
CPSF1P1-201ENST00000397477 VHLP40337 213 aa10.62□□□□□ -0.71
CPSF1P1-201ENST00000397477 SLC5A3P53794 718 aa10.62□□□□□ -0.71
CPSF1P1-201ENST00000397477 HABP4Q5JVS0 413 aaKnown RBP10.62□□□□□ -0.71
CPSF1P1-201ENST00000397477 WASHC2DQ5SRD0 308 aa10.62□□□□□ -0.71
CPSF1P1-201ENST00000397477 LRRC74BQ6ZQY2 392 aa10.62□□□□□ -0.71
CPSF1P1-201ENST00000397477 ULK2Q8IYT8 1036 aa10.62□□□□□ -0.71
CPSF1P1-201ENST00000397477 ZNF398Q8TD17 642 aa10.62□□□□□ -0.71
CPSF1P1-201ENST00000397477 KCNN1Q92952 543 aa10.62□□□□□ -0.71
CPSF1P1-201ENST00000397477 ACE2Q9BYF1 805 aaPredicted RBP10.62□□□□□ -0.71
CPSF1P1-201ENST00000397477 TRPV6Q9H1D0 765 aa10.62□□□□□ -0.71
CPSF1P1-201ENST00000397477 NMRK1Q9NWW6 199 aa10.62□□□□□ -0.71
CPSF1P1-201ENST00000397477 SUFUQ9UMX1 484 aa10.62□□□□□ -0.71
CPSF1P1-201ENST00000397477 BNIP3LO60238 219 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms