RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 TARSL2A2RTX5 802 aaKnown RBP24.08■■□□□ 1.44
TSPAN4-202ENST00000397396 C5orf60A6NFR6 353 aa24.08■■□□□ 1.44
TSPAN4-202ENST00000397396 PRAMEF11O60813 436 aa24.08■■□□□ 1.44
TSPAN4-202ENST00000397396 NEBLO76041 1014 aa24.08■■□□□ 1.44
TSPAN4-202ENST00000397396 EIF2DP41214 584 aaKnown RBP24.08■■□□□ 1.44
TSPAN4-202ENST00000397396 CSKP41240 450 aa24.08■■□□□ 1.44
TSPAN4-202ENST00000397396 RENBPP51606 427 aa24.08■■□□□ 1.44
TSPAN4-202ENST00000397396 IFI35P80217 286 aaPredicted RBP24.08■■□□□ 1.44
TSPAN4-202ENST00000397396 LMAN2Q12907 356 aa24.08■■□□□ 1.44
TSPAN4-202ENST00000397396 HNRNPDQ14103 355 aaKnown RBP24.08■■□□□ 1.44
TSPAN4-202ENST00000397396 RFTN1Q14699 578 aaPredicted RBP24.08■■□□□ 1.44
TSPAN4-202ENST00000397396 ITPRIPL2Q3MIP1 535 aa24.08■■□□□ 1.44
TSPAN4-202ENST00000397396 METTL3Q86U44 580 aaKnown RBP24.08■■□□□ 1.44
TSPAN4-202ENST00000397396 TP53INP2Q8IXH6 220 aa24.08■■□□□ 1.44
TSPAN4-202ENST00000397396 CCDC33Q8N5R6 958 aa24.08■■□□□ 1.44
TSPAN4-202ENST00000397396 FAM71DQ8N9W8 422 aa24.08■■□□□ 1.44
TSPAN4-202ENST00000397396 OR7D4Q8NG98 312 aa24.08■■□□□ 1.44
TSPAN4-202ENST00000397396 CSGALNACT1Q8TDX6 532 aa24.08■■□□□ 1.44
TSPAN4-202ENST00000397396 FEM1AQ9BSK4 669 aa24.08■■□□□ 1.44
TSPAN4-202ENST00000397396 SPON2Q9BUD6 331 aa24.08■■□□□ 1.44
TSPAN4-202ENST00000397396 PAK5Q9P286 719 aa24.08■■□□□ 1.44
TSPAN4-202ENST00000397396 FBXO10Q9UK96 956 aa24.08■■□□□ 1.44
TSPAN4-202ENST00000397396 A0A0D9SEW6 157 aa24.07■■□□□ 1.44
TSPAN4-202ENST00000397396 OPHN1O60890 802 aa24.07■■□□□ 1.44
TSPAN4-202ENST00000397396 KRT14P02533 472 aa24.07■■□□□ 1.44
TSPAN4-202ENST00000397396 VAV1P15498 845 aa24.07■■□□□ 1.44
TSPAN4-202ENST00000397396 ACVRL1P37023 503 aa24.07■■□□□ 1.44
TSPAN4-202ENST00000397396 CLCN6P51797 869 aa24.07■■□□□ 1.44
TSPAN4-202ENST00000397396 SULT2A1Q06520 285 aa24.07■■□□□ 1.44
TSPAN4-202ENST00000397396 PLEKHG6Q3KR16 790 aa24.07■■□□□ 1.44
TSPAN4-202ENST00000397396 FSCBQ5H9T9 825 aa24.07■■□□□ 1.44
TSPAN4-202ENST00000397396 RETSATQ6NUM9 610 aa24.07■■□□□ 1.44
TSPAN4-202ENST00000397396 AHI1Q8N157 1196 aa24.07■■□□□ 1.44
TSPAN4-202ENST00000397396 NETO2Q8NC67 525 aa24.07■■□□□ 1.44
TSPAN4-202ENST00000397396 MYRIPQ8NFW9 859 aa24.07■■□□□ 1.44
TSPAN4-202ENST00000397396 WFDC5Q8TCV5 224 aa24.07■■□□□ 1.44
TSPAN4-202ENST00000397396 CASKIN2Q8WXE0 1202 aa24.07■■□□□ 1.44
TSPAN4-202ENST00000397396 MAML1Q92585 1016 aa24.07■■□□□ 1.44
TSPAN4-202ENST00000397396 EXOC4Q96A65 974 aa24.07■■□□□ 1.44
TSPAN4-202ENST00000397396 TRPV5Q9NQA5 729 aa24.07■■□□□ 1.44
TSPAN4-202ENST00000397396 ABCB8Q9NUT2 735 aa24.07■■□□□ 1.44
TSPAN4-202ENST00000397396 DNAJC17Q9NVM6 304 aaKnown RBP24.07■■□□□ 1.44
TSPAN4-202ENST00000397396 SEPT10Q9P0V9 454 aa24.07■■□□□ 1.44
TSPAN4-202ENST00000397396 ASIC3Q9UHC3 531 aa24.07■■□□□ 1.44
TSPAN4-202ENST00000397396 GGA2Q9UJY4 613 aa24.07■■□□□ 1.44
TSPAN4-202ENST00000397396 SLC27A6Q9Y2P4 619 aa24.07■■□□□ 1.44
TSPAN4-202ENST00000397396 OR51B4Q9Y5P0 310 aa24.07■■□□□ 1.44
TSPAN4-202ENST00000397396 CHD5Q8TDI0 1954 aa24.06■■□□□ 1.44
TSPAN4-202ENST00000397396 A0A0A0MRY4 1105 aa24.06■■□□□ 1.44
TSPAN4-202ENST00000397396 GCATO75600 419 aa24.06■■□□□ 1.44
TSPAN4-202ENST00000397396 HEXIM1O94992 359 aaKnown RBP24.06■■□□□ 1.44
TSPAN4-202ENST00000397396 TUBBP07437 444 aa24.06■■□□□ 1.44
TSPAN4-202ENST00000397396 PABPC1P11940 636 aaKnown RBP24.06■■□□□ 1.44
TSPAN4-202ENST00000397396 CCNB1P14635 433 aa24.06■■□□□ 1.44
TSPAN4-202ENST00000397396 DGKGP49619 791 aa24.06■■□□□ 1.44
TSPAN4-202ENST00000397396 ITPRIPL1Q6GPH6 555 aa24.06■■□□□ 1.44
TSPAN4-202ENST00000397396 ETFBKMTQ8IXQ9 262 aa24.06■■□□□ 1.44
TSPAN4-202ENST00000397396 OR52K2Q8NGK3 314 aa24.06■■□□□ 1.44
TSPAN4-202ENST00000397396 DNASE1L2Q92874 299 aa24.06■■□□□ 1.44
TSPAN4-202ENST00000397396 SPATA13Q96N96 652 aa24.06■■□□□ 1.44
TSPAN4-202ENST00000397396 PPP1R2P1Q96PQ5 205 aa24.06■■□□□ 1.44
TSPAN4-202ENST00000397396 ERP44Q9BS26 406 aa24.06■■□□□ 1.44
TSPAN4-202ENST00000397396 RNF103O00237 685 aa24.05■■□□□ 1.44
TSPAN4-202ENST00000397396 CBX4O00257 560 aa24.05■■□□□ 1.44
TSPAN4-202ENST00000397396 MCM3P25205 808 aa24.05■■□□□ 1.44
TSPAN4-202ENST00000397396 HLA-FP30511 346 aa24.05■■□□□ 1.44
TSPAN4-202ENST00000397396 GDF10P55107 478 aa24.05■■□□□ 1.44
TSPAN4-202ENST00000397396 SLC20A2Q08357 652 aa24.05■■□□□ 1.44
TSPAN4-202ENST00000397396 GRAMD4Q6IC98 578 aa24.05■■□□□ 1.44
TSPAN4-202ENST00000397396 ARHGAP36Q6ZRI8 547 aa24.05■■□□□ 1.44
TSPAN4-202ENST00000397396 ARHGEF18Q6ZSZ5 1173 aa24.05■■□□□ 1.44
TSPAN4-202ENST00000397396 BBOF1Q8ND07 529 aa24.05■■□□□ 1.44
TSPAN4-202ENST00000397396 LRRC45Q96CN5 670 aa24.05■■□□□ 1.44
TSPAN4-202ENST00000397396 ALG14Q96F25 216 aa24.05■■□□□ 1.44
TSPAN4-202ENST00000397396 LMLNQ96KR4 655 aa24.05■■□□□ 1.44
TSPAN4-202ENST00000397396 KCNK12Q9HB15 430 aa24.05■■□□□ 1.44
TSPAN4-202ENST00000397396 KLHL8Q9P2G9 620 aaPredicted RBP24.05■■□□□ 1.44
TSPAN4-202ENST00000397396 THEGQ9P2T0 379 aa24.05■■□□□ 1.44
TSPAN4-202ENST00000397396 DEC1Q9P2X7 70 aa24.05■■□□□ 1.44
TSPAN4-202ENST00000397396 UBA2Q9UBT2 640 aaPredicted RBP24.05■■□□□ 1.44
TSPAN4-202ENST00000397396 PRKAG3Q9UGI9 489 aa24.05■■□□□ 1.44
TSPAN4-202ENST00000397396 NEU2Q9Y3R4 380 aa24.05■■□□□ 1.44
TSPAN4-202ENST00000397396 KCNK1O00180 336 aa24.04■■□□□ 1.44
TSPAN4-202ENST00000397396 ARNTLO00327 626 aa24.04■■□□□ 1.44
TSPAN4-202ENST00000397396 RHOXF2BP0C7M4 288 aa24.04■■□□□ 1.44
TSPAN4-202ENST00000397396 PTPN3P26045 913 aa24.04■■□□□ 1.44
TSPAN4-202ENST00000397396 MZF1P28698 734 aaPredicted RBP24.04■■□□□ 1.44
TSPAN4-202ENST00000397396 CD70P32970 193 aa24.04■■□□□ 1.44
TSPAN4-202ENST00000397396 TNK2Q07912 1038 aa24.04■■□□□ 1.44
TSPAN4-202ENST00000397396 TEX44Q53QW1 395 aa24.04■■□□□ 1.44
TSPAN4-202ENST00000397396 PITRM1Q5JRX3 1037 aa24.04■■□□□ 1.44
TSPAN4-202ENST00000397396 MARC1Q5VT66 337 aa24.04■■□□□ 1.44
TSPAN4-202ENST00000397396 NUDT18Q6ZVK8 323 aa24.04■■□□□ 1.44
TSPAN4-202ENST00000397396 GPR161Q8N6U8 529 aaKnown RBP24.04■■□□□ 1.44
TSPAN4-202ENST00000397396 ST13P5Q8NFI4 369 aaPredicted RBP24.04■■□□□ 1.44
TSPAN4-202ENST00000397396 IL12RB2Q99665 862 aa24.04■■□□□ 1.44
TSPAN4-202ENST00000397396 RHOXF2Q9BQY4 288 aa24.04■■□□□ 1.44
TSPAN4-202ENST00000397396 RPP25Q9BUL9 199 aaKnown RBP24.04■■□□□ 1.44
TSPAN4-202ENST00000397396 C10orf88Q9H8K7 445 aa24.04■■□□□ 1.44
TSPAN4-202ENST00000397396 PDFQ9HBH1 243 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms