RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 TDRD5Q8NAT2 981 aaKnown RBP15.28■□□□□ 0.04
CAPN3-207ENST00000397200 RIN3Q8TB24 985 aa15.28■□□□□ 0.04
CAPN3-207ENST00000397200 BPIFB1Q8TDL5 484 aa15.28■□□□□ 0.04
CAPN3-207ENST00000397200 ATXN2LQ8WWM7 1075 aaKnown RBP15.28■□□□□ 0.04
CAPN3-207ENST00000397200 P3H4Q92791 437 aa15.28■□□□□ 0.04
CAPN3-207ENST00000397200 RSPRY1Q96DX4 576 aa15.28■□□□□ 0.04
CAPN3-207ENST00000397200 C9orf72Q96LT7 481 aa15.28■□□□□ 0.04
CAPN3-207ENST00000397200 PHF7Q9BWX1 381 aaPredicted RBP15.28■□□□□ 0.04
CAPN3-207ENST00000397200 CCDC134Q9H6E4 229 aa15.28■□□□□ 0.04
CAPN3-207ENST00000397200 SAYSD1Q9NPB0 183 aa15.28■□□□□ 0.04
CAPN3-207ENST00000397200 RCOR3Q9P2K3 495 aaPredicted RBP15.28■□□□□ 0.04
CAPN3-207ENST00000397200 TBC1D14Q9P2M4 693 aa15.28■□□□□ 0.04
CAPN3-207ENST00000397200 EPS15L1Q9UBC2 864 aa15.28■□□□□ 0.04
CAPN3-207ENST00000397200 STOML2Q9UJZ1 356 aa15.28■□□□□ 0.04
CAPN3-207ENST00000397200 A0A087WUV0 522 aaPredicted RBP15.27■□□□□ 0.03
CAPN3-207ENST00000397200 BCLAF3A2AJT9 711 aaKnown RBP15.27■□□□□ 0.03
CAPN3-207ENST00000397200 F5H5T6 163 aa15.27■□□□□ 0.03
CAPN3-207ENST00000397200 FAM72CH0Y354 149 aa15.27■□□□□ 0.03
CAPN3-207ENST00000397200 H3BRJ5 948 aa15.27■□□□□ 0.03
CAPN3-207ENST00000397200 EEF2KO00418 725 aaKnown RBP15.27■□□□□ 0.03
CAPN3-207ENST00000397200 SLC9A3R1O14745 358 aaPredicted RBP15.27■□□□□ 0.03
CAPN3-207ENST00000397200 CDH16O75309 829 aa15.27■□□□□ 0.03
CAPN3-207ENST00000397200 FAM107AO95990 144 aa15.27■□□□□ 0.03
CAPN3-207ENST00000397200 IFNB1P01574 187 aa15.27■□□□□ 0.03
CAPN3-207ENST00000397200 SLCO1A2P46721 670 aa15.27■□□□□ 0.03
CAPN3-207ENST00000397200 TPI1P60174 286 aa15.27■□□□□ 0.03
CAPN3-207ENST00000397200 SEMA3BQ13214 749 aa15.27■□□□□ 0.03
CAPN3-207ENST00000397200 FAM133BQ5BKY9 247 aaKnown RBP15.27■□□□□ 0.03
CAPN3-207ENST00000397200 FAM72AQ5TYM5 149 aa15.27■□□□□ 0.03
CAPN3-207ENST00000397200 ANKRD22Q5VYY1 191 aa15.27■□□□□ 0.03
CAPN3-207ENST00000397200 TANGO2Q6ICL3 276 aa15.27■□□□□ 0.03
CAPN3-207ENST00000397200 FAM72DQ6L9T8 149 aa15.27■□□□□ 0.03
CAPN3-207ENST00000397200 MTSS1LQ765P7 747 aa15.27■□□□□ 0.03
CAPN3-207ENST00000397200 EXOC3L1Q86VI1 746 aa15.27■□□□□ 0.03
CAPN3-207ENST00000397200 NLRP14Q86W24 1093 aa15.27■□□□□ 0.03
CAPN3-207ENST00000397200 FAM72BQ86X60 149 aa15.27■□□□□ 0.03
CAPN3-207ENST00000397200 KIAA1958Q8N8K9 716 aa15.27■□□□□ 0.03
CAPN3-207ENST00000397200 ST13P5Q8NFI4 369 aaPredicted RBP15.27■□□□□ 0.03
CAPN3-207ENST00000397200 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.27■□□□□ 0.03
CAPN3-207ENST00000397200 PRMT1Q99873 361 aaKnown RBP15.27■□□□□ 0.03
CAPN3-207ENST00000397200 PPCSQ9HAB8 311 aa15.27■□□□□ 0.03
CAPN3-207ENST00000397200 PRDM16Q9HAZ2 1276 aa15.27■□□□□ 0.03
CAPN3-207ENST00000397200 USP29Q9HBJ7 922 aa15.27■□□□□ 0.03
CAPN3-207ENST00000397200 VANGL2Q9ULK5 521 aa15.27■□□□□ 0.03
CAPN3-207ENST00000397200 SPTBN5Q9NRC6 3674 aaKnown RBP15.27■□□□□ 0.03
CAPN3-207ENST00000397200 XIRP2A4UGR9 3374 aa15.27■□□□□ 0.03
CAPN3-207ENST00000397200 C5orf60A6NFR6 353 aa15.26■□□□□ 0.03
CAPN3-207ENST00000397200 SMIM23A6NLE4 172 aa15.26■□□□□ 0.03
CAPN3-207ENST00000397200 E9PAM4 449 aa15.26■□□□□ 0.03
CAPN3-207ENST00000397200 TMEM63AO94886 807 aa15.26■□□□□ 0.03
CAPN3-207ENST00000397200 LRIG2O94898 1065 aa15.26■□□□□ 0.03
CAPN3-207ENST00000397200 TSHRP16473 764 aa15.26■□□□□ 0.03
CAPN3-207ENST00000397200 GOT1P17174 413 aa15.26■□□□□ 0.03
CAPN3-207ENST00000397200 SLC6A4P31645 630 aa15.26■□□□□ 0.03
CAPN3-207ENST00000397200 HTR7P34969 479 aa15.26■□□□□ 0.03
CAPN3-207ENST00000397200 MAGEA6P43360 314 aa15.26■□□□□ 0.03
CAPN3-207ENST00000397200 HIF1AQ16665 826 aa15.26■□□□□ 0.03
CAPN3-207ENST00000397200 FBXL22Q6P050 247 aa15.26■□□□□ 0.03
CAPN3-207ENST00000397200 RFWD3Q6PCD5 774 aa15.26■□□□□ 0.03
CAPN3-207ENST00000397200 PARM1Q6UWI2 310 aa15.26■□□□□ 0.03
CAPN3-207ENST00000397200 C14orf80Q86SX3 495 aa15.26■□□□□ 0.03
CAPN3-207ENST00000397200 FAM217AQ8IXS0 508 aa15.26■□□□□ 0.03
CAPN3-207ENST00000397200 LGI2Q8N0V4 545 aa15.26■□□□□ 0.03
CAPN3-207ENST00000397200 FAM71DQ8N9W8 422 aa15.26■□□□□ 0.03
CAPN3-207ENST00000397200 ELSPBP1Q96BH3 223 aa15.26■□□□□ 0.03
CAPN3-207ENST00000397200 OTUB2Q96DC9 234 aa15.26■□□□□ 0.03
CAPN3-207ENST00000397200 TBC1D31Q96DN5 1066 aa15.26■□□□□ 0.03
CAPN3-207ENST00000397200 RPRD1AQ96P16 312 aaPredicted RBP15.26■□□□□ 0.03
CAPN3-207ENST00000397200 LRRC3BQ96PB8 259 aa15.26■□□□□ 0.03
CAPN3-207ENST00000397200 XPO6Q96QU8 1125 aaKnown RBP15.26■□□□□ 0.03
CAPN3-207ENST00000397200 C10orf88Q9H8K7 445 aa15.26■□□□□ 0.03
CAPN3-207ENST00000397200 PRDM6Q9NQX0 595 aa15.26■□□□□ 0.03
CAPN3-207ENST00000397200 THG1LQ9NWX6 298 aaKnown RBP15.26■□□□□ 0.03
CAPN3-207ENST00000397200 FETUBQ9UGM5 382 aa15.26■□□□□ 0.03
CAPN3-207ENST00000397200 ACTL7BQ9Y614 415 aa15.26■□□□□ 0.03
CAPN3-207ENST00000397200 C5orf42Q9H799 3197 aa15.26■□□□□ 0.03
CAPN3-207ENST00000397200 ATXN2Q99700 1313 aaKnown RBP15.26■□□□□ 0.03
CAPN3-207ENST00000397200 C2CD4DB7Z1M9 353 aa15.25■□□□□ 0.03
CAPN3-207ENST00000397200 NDUFAB1O14561 156 aa15.25■□□□□ 0.03
CAPN3-207ENST00000397200 ECI2O75521 394 aa15.25■□□□□ 0.03
CAPN3-207ENST00000397200 CHN1P15882 459 aa15.25■□□□□ 0.03
CAPN3-207ENST00000397200 ZFXP17010 805 aaPredicted RBP15.25■□□□□ 0.03
CAPN3-207ENST00000397200 HCAR3P49019 387 aa15.25■□□□□ 0.03
CAPN3-207ENST00000397200 ARL4CP56559 192 aa15.25■□□□□ 0.03
CAPN3-207ENST00000397200 TFF2Q03403 129 aa15.25■□□□□ 0.03
CAPN3-207ENST00000397200 XRCC4Q13426 336 aa15.25■□□□□ 0.03
CAPN3-207ENST00000397200 KCNJ11Q14654 390 aa15.25■□□□□ 0.03
CAPN3-207ENST00000397200 FASTKD3Q14CZ7 662 aaKnown RBP15.25■□□□□ 0.03
CAPN3-207ENST00000397200 RABGAP1LQ5R372 815 aa15.25■□□□□ 0.03
CAPN3-207ENST00000397200 MANEALQ5VSG8 457 aa15.25■□□□□ 0.03
CAPN3-207ENST00000397200 RWDD4Q6NW29 188 aaKnown RBP15.25■□□□□ 0.03
CAPN3-207ENST00000397200 RFX8Q6ZV50 586 aa15.25■□□□□ 0.03
CAPN3-207ENST00000397200 YAF2Q8IY57 180 aa15.25■□□□□ 0.03
CAPN3-207ENST00000397200 CPXM2Q8N436 756 aa15.25■□□□□ 0.03
CAPN3-207ENST00000397200 ZNF473Q8WTR7 871 aaKnown RBP15.25■□□□□ 0.03
CAPN3-207ENST00000397200 OSCP1Q8WVF1 389 aa15.25■□□□□ 0.03
CAPN3-207ENST00000397200 FGF14Q92915 247 aa15.25■□□□□ 0.03
CAPN3-207ENST00000397200 CSPG4P5Q96PW8 444 aa15.25■□□□□ 0.03
CAPN3-207ENST00000397200 KXD1Q9BQD3 176 aa15.25■□□□□ 0.03
CAPN3-207ENST00000397200 CCDC77Q9BR77 488 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms