RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 PTPN1P18031 435 aaKnown RBP7.3□□□□□ -1.24
UPF2-203ENST00000397053 FASP25445 335 aa7.3□□□□□ -1.24
UPF2-203ENST00000397053 CRABP2P29373 138 aa7.3□□□□□ -1.24
UPF2-203ENST00000397053 PLPP4Q5VZY2 271 aa7.3□□□□□ -1.24
UPF2-203ENST00000397053 DET1Q7L5Y6 550 aa7.3□□□□□ -1.24
UPF2-203ENST00000397053 SCUBE3Q8IX30 993 aa7.3□□□□□ -1.24
UPF2-203ENST00000397053 TDRD5Q8NAT2 981 aaKnown RBP7.3□□□□□ -1.24
UPF2-203ENST00000397053 ZNF473Q8WTR7 871 aaKnown RBP7.3□□□□□ -1.24
UPF2-203ENST00000397053 CAPSLQ8WWF8 208 aa7.3□□□□□ -1.24
UPF2-203ENST00000397053 PAFAH2Q99487 392 aa7.3□□□□□ -1.24
UPF2-203ENST00000397053 VAT1Q99536 393 aa7.3□□□□□ -1.24
UPF2-203ENST00000397053 SPATA5L1Q9BVQ7 753 aa7.3□□□□□ -1.24
UPF2-203ENST00000397053 PIGUQ9H490 435 aa7.3□□□□□ -1.24
UPF2-203ENST00000397053 POPDC2Q9HBU9 364 aa7.3□□□□□ -1.24
UPF2-203ENST00000397053 DNAJC11Q9NVH1 559 aa7.3□□□□□ -1.24
UPF2-203ENST00000397053 CDH9Q9ULB4 789 aa7.3□□□□□ -1.24
UPF2-203ENST00000397053 IQCMA0A1B0GVH7 501 aa7.3□□□□□ -1.24
UPF2-203ENST00000397053 TPD52L2O43399 206 aaKnown RBP7.3□□□□□ -1.24
UPF2-203ENST00000397053 NR2F1P10589 423 aa7.3□□□□□ -1.24
UPF2-203ENST00000397053 EPORP19235 508 aa7.3□□□□□ -1.24
UPF2-203ENST00000397053 STAT5AP42229 794 aa7.3□□□□□ -1.24
UPF2-203ENST00000397053 CRATP43155 626 aa7.3□□□□□ -1.24
UPF2-203ENST00000397053 ZNF135P52742 658 aaPredicted RBP7.3□□□□□ -1.24
UPF2-203ENST00000397053 CNTN2Q02246 1040 aa7.3□□□□□ -1.24
UPF2-203ENST00000397053 DGKZQ13574 1117 aa7.3□□□□□ -1.24
UPF2-203ENST00000397053 SMU1Q2TAY7 513 aa7.3□□□□□ -1.24
UPF2-203ENST00000397053 RAP1GAP2Q684P5 730 aa7.3□□□□□ -1.24
UPF2-203ENST00000397053 IL27RAQ6UWB1 636 aa7.3□□□□□ -1.24
UPF2-203ENST00000397053 METTL3Q86U44 580 aaKnown RBP7.3□□□□□ -1.24
UPF2-203ENST00000397053 PROSER1Q86XN7 944 aa7.3□□□□□ -1.24
UPF2-203ENST00000397053 ACTRT2Q8TDY3 377 aa7.3□□□□□ -1.24
UPF2-203ENST00000397053 CRELD1Q96HD1 420 aa7.3□□□□□ -1.24
UPF2-203ENST00000397053 TEKT5Q96M29 485 aa7.3□□□□□ -1.24
UPF2-203ENST00000397053 APOL4Q9BPW4 351 aa7.3□□□□□ -1.24
UPF2-203ENST00000397053 HGH1Q9BTY7 390 aa7.3□□□□□ -1.24
UPF2-203ENST00000397053 RNPEPQ9H4A4 650 aa7.3□□□□□ -1.24
UPF2-203ENST00000397053 MCCC2Q9HCC0 563 aa7.3□□□□□ -1.24
UPF2-203ENST00000397053 AGO4Q9HCK5 861 aaKnown RBP7.3□□□□□ -1.24
UPF2-203ENST00000397053 PHPT1Q9NRX4 125 aaPredicted RBP7.3□□□□□ -1.24
UPF2-203ENST00000397053 IMP3Q9NV31 184 aaKnown RBP7.3□□□□□ -1.24
UPF2-203ENST00000397053 MRTO4Q9UKD2 239 aaKnown RBP7.3□□□□□ -1.24
UPF2-203ENST00000397053 CHKBQ9Y259 395 aa7.3□□□□□ -1.24
UPF2-203ENST00000397053 PIK3CDO00329 1044 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 VIPP01282 170 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 TPP2P29144 1249 aaPredicted RBP7.29□□□□□ -1.24
UPF2-203ENST00000397053 PLK1P53350 603 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 SOX10P56693 466 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 ZNF268Q14587 947 aaPredicted RBP7.29□□□□□ -1.24
UPF2-203ENST00000397053 TEAD4Q15561 434 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 TSGA10IPQ3SY00 556 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 GPAT3Q53EU6 434 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 ARSJQ5FYB0 599 aaPredicted RBP7.29□□□□□ -1.24
UPF2-203ENST00000397053 ZNF697Q5TEC3 545 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 OLFML2BQ68BL8 750 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 PDPK2PQ6A1A2 396 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 ZPBP2Q6X784 338 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 CCNI2Q6ZMN8 369 aaPredicted RBP7.29□□□□□ -1.24
UPF2-203ENST00000397053 STK32CQ86UX6 486 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 EXOC3L1Q86VI1 746 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 RASGEF1AQ8N9B8 481 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 HJURPQ8NCD3 748 aaPredicted RBP7.29□□□□□ -1.24
UPF2-203ENST00000397053 ZNF606Q8WXB4 792 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 BSNDQ8WZ55 320 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 CEP44Q9C0F1 390 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 HIPK3Q9H422 1215 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 EPB41L4AQ9HCS5 686 aaPredicted RBP7.29□□□□□ -1.24
UPF2-203ENST00000397053 NDRG2Q9UN36 371 aaKnown RBP7.29□□□□□ -1.24
UPF2-203ENST00000397053 MAPRE3Q9UPY8 281 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 PCDHA3Q9Y5H8 950 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 NRCAMQ92823 1304 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 CCDC154A6NI56 674 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 WNT10BO00744 389 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 CD3EAPO15446 510 aaKnown RBP7.29□□□□□ -1.24
UPF2-203ENST00000397053 TBL1XO60907 577 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 LGALS2P05162 132 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 FAM228BP0C875 321 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 CDC25CP30307 473 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 PSEN1P49768 467 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 FAM187BQ17R55 369 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 TBC1D25Q3MII6 688 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 CNSTQ6PJW8 725 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 ABRAQ8N0Z2 381 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 TPCN2Q8NHX9 752 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 GRIP2Q9C0E4 1043 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 ISCUQ9H1K1 167 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 TCF7L2Q9NQB0 619 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 MRPS7Q9Y2R9 242 aaKnown RBP7.29□□□□□ -1.24
UPF2-203ENST00000397053 TSC22D4Q9Y3Q8 395 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 PCDHA11Q9Y5I1 949 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 KCNE2Q9Y6J6 123 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 SETD1BQ9UPS6 1966 aaKnown RBP7.29□□□□□ -1.24
UPF2-203ENST00000397053 C15orf38-AP3S2A0A0A6YYH1 394 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 A0A1W2PQJ5 194 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 ZSCAN5CA6NGD5 496 aaPredicted RBP7.29□□□□□ -1.24
UPF2-203ENST00000397053 CES2O00748 559 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 FTH1P02794 183 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 ALAS2P22557 587 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 WARSP23381 471 aaKnown RBP7.29□□□□□ -1.24
UPF2-203ENST00000397053 GABRR2P28476 465 aa7.29□□□□□ -1.24
UPF2-203ENST00000397053 ARHGDIBP52566 201 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms