RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 PPP1R21Q6ZMI0 780 aa13.9□□□□□ -0.18
MCF2L-209ENST00000397036 PID1Q7Z2X4 250 aa13.9□□□□□ -0.18
MCF2L-209ENST00000397036 HDXQ7Z353 690 aa13.9□□□□□ -0.18
MCF2L-209ENST00000397036 NPAS3Q8IXF0 933 aa13.9□□□□□ -0.18
MCF2L-209ENST00000397036 CCDC33Q8N5R6 958 aa13.9□□□□□ -0.18
MCF2L-209ENST00000397036 NETO2Q8NC67 525 aa13.9□□□□□ -0.18
MCF2L-209ENST00000397036 FIBINQ8TAL6 211 aa13.9□□□□□ -0.18
MCF2L-209ENST00000397036 PRCCQ92733 491 aaPredicted RBP13.9□□□□□ -0.18
MCF2L-209ENST00000397036 FGF13Q92913 245 aa13.9□□□□□ -0.18
MCF2L-209ENST00000397036 SMARCD2Q92925 531 aa13.9□□□□□ -0.18
MCF2L-209ENST00000397036 E2F7Q96AV8 911 aa13.9□□□□□ -0.18
MCF2L-209ENST00000397036 ASB16Q96NS5 453 aa13.9□□□□□ -0.18
MCF2L-209ENST00000397036 TTYH1Q9H313 450 aaPredicted RBP13.9□□□□□ -0.18
MCF2L-209ENST00000397036 VIPAS39Q9H9C1 493 aa13.9□□□□□ -0.18
MCF2L-209ENST00000397036 ETNK1Q9HBU6 452 aa13.9□□□□□ -0.18
MCF2L-209ENST00000397036 MARK1Q9P0L2 795 aa13.9□□□□□ -0.18
MCF2L-209ENST00000397036 ERI2A8K979 691 aaKnown RBP13.9□□□□□ -0.19
MCF2L-209ENST00000397036 TRDMT1O14717 391 aaKnown RBP13.9□□□□□ -0.19
MCF2L-209ENST00000397036 LINC01565O15544 149 aa13.9□□□□□ -0.19
MCF2L-209ENST00000397036 PSMD3O43242 534 aa13.9□□□□□ -0.19
MCF2L-209ENST00000397036 KDELR3O43731 214 aa13.9□□□□□ -0.19
MCF2L-209ENST00000397036 TSPAN3O60637 253 aa13.9□□□□□ -0.19
MCF2L-209ENST00000397036 METTL18O95568 372 aa13.9□□□□□ -0.19
MCF2L-209ENST00000397036 PENKP01210 267 aaPredicted RBP13.9□□□□□ -0.19
MCF2L-209ENST00000397036 SGSHP51688 502 aa13.9□□□□□ -0.19
MCF2L-209ENST00000397036 PLK1P53350 603 aa13.9□□□□□ -0.19
MCF2L-209ENST00000397036 NRLP54845 237 aa13.9□□□□□ -0.19
MCF2L-209ENST00000397036 RFTN1Q14699 578 aaPredicted RBP13.9□□□□□ -0.19
MCF2L-209ENST00000397036 CBX2Q14781 532 aaPredicted RBP13.9□□□□□ -0.19
MCF2L-209ENST00000397036 FYB2Q5VWT5 728 aa13.9□□□□□ -0.19
MCF2L-209ENST00000397036 TMC3Q7Z5M5 1100 aa13.9□□□□□ -0.19
MCF2L-209ENST00000397036 CIR1Q86X95 450 aaPredicted RBP13.9□□□□□ -0.19
MCF2L-209ENST00000397036 GSPT2Q8IYD1 628 aaKnown RBP13.9□□□□□ -0.19
MCF2L-209ENST00000397036 ADGRG2Q8IZP9 1017 aa13.9□□□□□ -0.19
MCF2L-209ENST00000397036 RIN3Q8TB24 985 aa13.9□□□□□ -0.19
MCF2L-209ENST00000397036 NSMCE1Q8WV22 266 aa13.9□□□□□ -0.19
MCF2L-209ENST00000397036 FUT8Q9BYC5 575 aa13.9□□□□□ -0.19
MCF2L-209ENST00000397036 SMG9Q9H0W8 520 aaKnown RBP13.9□□□□□ -0.19
MCF2L-209ENST00000397036 KLHL8Q9P2G9 620 aaPredicted RBP13.9□□□□□ -0.19
MCF2L-209ENST00000397036 CDH7Q9ULB5 785 aa13.9□□□□□ -0.19
MCF2L-209ENST00000397036 OR51B4Q9Y5P0 310 aa13.9□□□□□ -0.19
MCF2L-209ENST00000397036 RHOCP08134 193 aa13.89□□□□□ -0.19
MCF2L-209ENST00000397036 MLNP12872 115 aa13.89□□□□□ -0.19
MCF2L-209ENST00000397036 HOXD9P28356 352 aaPredicted RBP13.89□□□□□ -0.19
MCF2L-209ENST00000397036 CD68P34810 354 aaPredicted RBP13.89□□□□□ -0.19
MCF2L-209ENST00000397036 MTHFRP42898 656 aa13.89□□□□□ -0.19
MCF2L-209ENST00000397036 BASP1P80723 227 aaKnown RBP13.89□□□□□ -0.19
MCF2L-209ENST00000397036 ZBTB17Q13105 803 aa13.89□□□□□ -0.19
MCF2L-209ENST00000397036 GRIN2CQ14957 1233 aa13.89□□□□□ -0.19
MCF2L-209ENST00000397036 ARHGAP36Q6ZRI8 547 aa13.89□□□□□ -0.19
MCF2L-209ENST00000397036 CCDC117Q8IWD4 279 aaPredicted RBP13.89□□□□□ -0.19
MCF2L-209ENST00000397036 CNTD1Q8N815 330 aa13.89□□□□□ -0.19
MCF2L-209ENST00000397036 DDI1Q8WTU0 396 aa13.89□□□□□ -0.19
MCF2L-209ENST00000397036 LRRN4Q8WUT4 740 aa13.89□□□□□ -0.19
MCF2L-209ENST00000397036 DEPDC1BQ8WUY9 529 aa13.89□□□□□ -0.19
MCF2L-209ENST00000397036 ING5Q8WYH8 240 aa13.89□□□□□ -0.19
MCF2L-209ENST00000397036 IRF7Q92985 503 aa13.89□□□□□ -0.19
MCF2L-209ENST00000397036 ALG14Q96F25 216 aa13.89□□□□□ -0.19
MCF2L-209ENST00000397036 MSLNLQ96KJ4 702 aa13.89□□□□□ -0.19
MCF2L-209ENST00000397036 PKNOX2Q96KN3 472 aa13.89□□□□□ -0.19
MCF2L-209ENST00000397036 RIPOR3Q96MK2 946 aa13.89□□□□□ -0.19
MCF2L-209ENST00000397036 FCRL5Q96RD9 977 aa13.89□□□□□ -0.19
MCF2L-209ENST00000397036 SLC2A11Q9BYW1 496 aa13.89□□□□□ -0.19
MCF2L-209ENST00000397036 GBA3Q9H227 469 aa13.89□□□□□ -0.19
MCF2L-209ENST00000397036 SP110Q9HB58 689 aa13.89□□□□□ -0.19
MCF2L-209ENST00000397036 PDFQ9HBH1 243 aa13.89□□□□□ -0.19
MCF2L-209ENST00000397036 HAUS2Q9NVX0 235 aa13.89□□□□□ -0.19
MCF2L-209ENST00000397036 ZNF446Q9NWS9 450 aa13.89□□□□□ -0.19
MCF2L-209ENST00000397036 KIAA1522Q9P206 1035 aaPredicted RBP13.89□□□□□ -0.19
MCF2L-209ENST00000397036 HPCAL4Q9UM19 191 aa13.89□□□□□ -0.19
MCF2L-209ENST00000397036 COLQQ9Y215 455 aaPredicted RBP13.89□□□□□ -0.19
MCF2L-209ENST00000397036 ATP8A1Q9Y2Q0 1164 aa13.89□□□□□ -0.19
MCF2L-209ENST00000397036 CHD5Q8TDI0 1954 aa13.88□□□□□ -0.19
MCF2L-209ENST00000397036 A0A0D9SEW6 157 aa13.88□□□□□ -0.19
MCF2L-209ENST00000397036 E7ESA3 106 aa13.88□□□□□ -0.19
MCF2L-209ENST00000397036 H0Y626 953 aa13.88□□□□□ -0.19
MCF2L-209ENST00000397036 ALOX15BO15296 676 aa13.88□□□□□ -0.19
MCF2L-209ENST00000397036 ZBTB24O43167 697 aaPredicted RBP13.88□□□□□ -0.19
MCF2L-209ENST00000397036 ACVRL1P37023 503 aa13.88□□□□□ -0.19
MCF2L-209ENST00000397036 SARNPP82979 210 aaKnown RBP13.88□□□□□ -0.19
MCF2L-209ENST00000397036 DHX9Q08211 1270 aaKnown RBP13.88□□□□□ -0.19
MCF2L-209ENST00000397036 CASP8Q14790 479 aa13.88□□□□□ -0.19
MCF2L-209ENST00000397036 KCTD19Q17RG1 926 aaPredicted RBP13.88□□□□□ -0.19
MCF2L-209ENST00000397036 FAM78AQ5JUQ0 283 aa13.88□□□□□ -0.19
MCF2L-209ENST00000397036 MARC1Q5VT66 337 aa13.88□□□□□ -0.19
MCF2L-209ENST00000397036 TRMT10CQ7L0Y3 403 aaKnown RBP13.88□□□□□ -0.19
MCF2L-209ENST00000397036 OR52K2Q8NGK3 314 aa13.88□□□□□ -0.19
MCF2L-209ENST00000397036 PABPC5Q96DU9 382 aaKnown RBP13.88□□□□□ -0.19
MCF2L-209ENST00000397036 LMLNQ96KR4 655 aa13.88□□□□□ -0.19
MCF2L-209ENST00000397036 FEM1AQ9BSK4 669 aa13.88□□□□□ -0.19
MCF2L-209ENST00000397036 GLOD4Q9HC38 313 aa13.88□□□□□ -0.19
MCF2L-209ENST00000397036 SPHK2Q9NRA0 654 aa13.88□□□□□ -0.19
MCF2L-209ENST00000397036 RBM22Q9NW64 420 aaKnown RBP eCLIP13.88□□□□□ -0.19
MCF2L-209ENST00000397036 SEPT10Q9P0V9 454 aa13.88□□□□□ -0.19
MCF2L-209ENST00000397036 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.87□□□□□ -0.19
MCF2L-209ENST00000397036 GOLGA6CA6NDK9 693 aa13.87□□□□□ -0.19
MCF2L-209ENST00000397036 GOLGA6BA6NDN3 693 aa13.87□□□□□ -0.19
MCF2L-209ENST00000397036 J3KR12 359 aa13.87□□□□□ -0.19
MCF2L-209ENST00000397036 ZMPSTE24O75844 475 aa13.87□□□□□ -0.19
MCF2L-209ENST00000397036 SUN1O94901 812 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms