RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 DNAJC1Q96KC8 554 aaKnown RBP5.49□□□□□ -1.53
VPS41-203ENST00000395969 ACSS3Q9H6R3 686 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 CWH43Q9H720 699 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 ARNT2Q9HBZ2 717 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 TRPC7Q9HCX4 862 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 OLA1Q9NTK5 396 aaKnown RBP5.49□□□□□ -1.53
VPS41-203ENST00000395969 ARL8BQ9NVJ2 186 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 MIOSQ9NXC5 875 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 STAP1Q9ULZ2 295 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 PTPN22Q9Y2R2 807 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 SH3GLB1Q9Y371 365 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 RASA4BC9J798 803 aa5.48□□□□□ -1.53
VPS41-203ENST00000395969 KIAA0355O15063 1070 aa5.48□□□□□ -1.53
VPS41-203ENST00000395969 VILLO15195 856 aa5.48□□□□□ -1.53
VPS41-203ENST00000395969 RASA4O43374 803 aa5.48□□□□□ -1.53
VPS41-203ENST00000395969 NDUFB5O43674 189 aa5.48□□□□□ -1.53
VPS41-203ENST00000395969 ATF2P15336 505 aa5.48□□□□□ -1.53
VPS41-203ENST00000395969 ZNF24P17028 368 aa5.48□□□□□ -1.53
VPS41-203ENST00000395969 YY1P25490 414 aa5.48□□□□□ -1.53
VPS41-203ENST00000395969 VARSP26640 1264 aaKnown RBP5.48□□□□□ -1.53
VPS41-203ENST00000395969 SDC4P31431 198 aa5.48□□□□□ -1.53
VPS41-203ENST00000395969 SLC18A2Q05940 514 aa5.48□□□□□ -1.53
VPS41-203ENST00000395969 KYNUQ16719 465 aa5.48□□□□□ -1.53
VPS41-203ENST00000395969 CLLU1OSQ5K130 101 aa5.48□□□□□ -1.53
VPS41-203ENST00000395969 ZNF534Q76KX8 674 aa5.48□□□□□ -1.53
VPS41-203ENST00000395969 NANOGNBQ7Z5D8 188 aa5.48□□□□□ -1.53
VPS41-203ENST00000395969 CPNE8Q86YQ8 564 aa5.48□□□□□ -1.53
VPS41-203ENST00000395969 CNTN4Q8IWV2 1026 aa5.48□□□□□ -1.53
VPS41-203ENST00000395969 CCDC105Q8IYK2 499 aa5.48□□□□□ -1.53
VPS41-203ENST00000395969 PGBD3Q8N328 593 aa5.48□□□□□ -1.53
VPS41-203ENST00000395969 SDR16C5Q8N3Y7 309 aa5.48□□□□□ -1.53
VPS41-203ENST00000395969 C3orf58Q8NDZ4 430 aa5.48□□□□□ -1.53
VPS41-203ENST00000395969 SP7Q8TDD2 431 aaPredicted RBP5.48□□□□□ -1.53
VPS41-203ENST00000395969 BTBD6Q96KE9 485 aa5.48□□□□□ -1.53
VPS41-203ENST00000395969 CFAP57Q96MR6 1250 aa5.48□□□□□ -1.53
VPS41-203ENST00000395969 ADAM33Q9BZ11 813 aa5.48□□□□□ -1.53
VPS41-203ENST00000395969 TIMMDC1Q9NPL8 285 aa5.48□□□□□ -1.53
VPS41-203ENST00000395969 PRDM5Q9NQX1 630 aaPredicted RBP5.48□□□□□ -1.53
VPS41-203ENST00000395969 ARHGEF4Q9NR80 690 aa5.48□□□□□ -1.53
VPS41-203ENST00000395969 TBC1D13Q9NVG8 400 aa5.48□□□□□ -1.53
VPS41-203ENST00000395969 TBCCD1Q9NVR7 557 aa5.48□□□□□ -1.53
VPS41-203ENST00000395969 TAS2R1Q9NYW7 299 aa5.48□□□□□ -1.53
VPS41-203ENST00000395969 MOCS1Q9NZB8 636 aa5.48□□□□□ -1.53
VPS41-203ENST00000395969 TBX21Q9UL17 535 aa5.48□□□□□ -1.53
VPS41-203ENST00000395969 TDRKHQ9Y2W6 561 aaKnown RBP5.48□□□□□ -1.53
VPS41-203ENST00000395969 SHROOM3Q8TF72 1996 aa5.48□□□□□ -1.53
VPS41-203ENST00000395969 APOL1O14791 398 aa5.48□□□□□ -1.53
VPS41-203ENST00000395969 MAGEB3O15480 346 aa5.48□□□□□ -1.53
VPS41-203ENST00000395969 GYG2O15488 501 aa5.48□□□□□ -1.53
VPS41-203ENST00000395969 TYROBPO43914 113 aa5.48□□□□□ -1.53
VPS41-203ENST00000395969 C6orf222P0C671 652 aaPredicted RBP5.48□□□□□ -1.53
VPS41-203ENST00000395969 CDK4P11802 303 aa5.48□□□□□ -1.53
VPS41-203ENST00000395969 CPA3P15088 417 aa5.48□□□□□ -1.53
VPS41-203ENST00000395969 TCF4P15884 667 aa5.48□□□□□ -1.53
VPS41-203ENST00000395969 AMPD1P23109 780 aa5.48□□□□□ -1.53
VPS41-203ENST00000395969 ZNF200P98182 395 aaPredicted RBP5.48□□□□□ -1.53
VPS41-203ENST00000395969 BEX3Q00994 111 aa5.48□□□□□ -1.53
VPS41-203ENST00000395969 TBL3Q12788 808 aaKnown RBP5.48□□□□□ -1.53
VPS41-203ENST00000395969 THOC5Q13769 683 aaKnown RBP5.48□□□□□ -1.53
VPS41-203ENST00000395969 DSG2Q14126 1118 aa5.48□□□□□ -1.53
VPS41-203ENST00000395969 NFE2Q16621 373 aaPredicted RBP5.48□□□□□ -1.53
VPS41-203ENST00000395969 TIGD5Q53EQ6 642 aa5.48□□□□□ -1.53
VPS41-203ENST00000395969 RALGPS1Q5JS13 557 aa5.48□□□□□ -1.53
VPS41-203ENST00000395969 TXNRD3NBQ6F5E7 133 aa5.48□□□□□ -1.53
VPS41-203ENST00000395969 DCUN1D2Q6PH85 259 aa5.48□□□□□ -1.53
VPS41-203ENST00000395969 LRRC8DQ7L1W4 858 aa5.48□□□□□ -1.53
VPS41-203ENST00000395969 NET1Q7Z628 596 aaPredicted RBP5.48□□□□□ -1.53
VPS41-203ENST00000395969 SATL1Q86VE3 508 aa5.48□□□□□ -1.53
VPS41-203ENST00000395969 PDSS2Q86YH6 399 aa5.48□□□□□ -1.53
VPS41-203ENST00000395969 CMTR2Q8IYT2 770 aaKnown RBP5.48□□□□□ -1.53
VPS41-203ENST00000395969 ACMSDQ8TDX5 336 aa5.48□□□□□ -1.53
VPS41-203ENST00000395969 MTBPQ96DY7 904 aa5.48□□□□□ -1.53
VPS41-203ENST00000395969 PRICKLE1Q96MT3 831 aaPredicted RBP5.48□□□□□ -1.53
VPS41-203ENST00000395969 CSPG4P5Q96PW8 444 aa5.48□□□□□ -1.53
VPS41-203ENST00000395969 WDR83Q9BRX9 315 aaKnown RBP5.48□□□□□ -1.53
VPS41-203ENST00000395969 SNRNP25Q9BV90 132 aaKnown RBP5.48□□□□□ -1.53
VPS41-203ENST00000395969 RBM38Q9H0Z9 239 aaKnown RBP5.48□□□□□ -1.53
VPS41-203ENST00000395969 PLAC1Q9HBJ0 212 aa5.48□□□□□ -1.53
VPS41-203ENST00000395969 GPAMQ9HCL2 828 aa5.48□□□□□ -1.53
VPS41-203ENST00000395969 XAB2Q9HCS7 855 aaKnown RBP5.48□□□□□ -1.53
VPS41-203ENST00000395969 DNPEPQ9ULA0 475 aa5.48□□□□□ -1.53
VPS41-203ENST00000395969 SMG5Q9UPR3 1016 aaKnown RBP5.48□□□□□ -1.53
VPS41-203ENST00000395969 TLR6Q9Y2C9 796 aa5.48□□□□□ -1.53
VPS41-203ENST00000395969 SNX9Q9Y5X1 595 aa5.48□□□□□ -1.53
VPS41-203ENST00000395969 H7C4K7 107 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 LILRB3O75022 631 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 HAUS5O94927 633 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 OLFM2O95897 454 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 PDGFRBP09619 1106 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 SLC2A3P11169 496 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 PDGFRAP16234 1089 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 NAT1P18440 290 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 CD9P21926 228 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 LMO2P25791 158 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 ITGA8P53708 1063 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 ADARP55265 1226 aaKnown RBP5.47□□□□□ -1.53
VPS41-203ENST00000395969 ADRM1Q16186 407 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 NOMO2Q5JPE7 1267 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 ZNF618Q5T7W0 954 aa5.47□□□□□ -1.53
VPS41-203ENST00000395969 LRRC8BQ6P9F7 803 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms