RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 LAMTOR4Q0VGL1 99 aa19.21■□□□□ 0.67
HOXC6-202ENST00000394331 CEACAM7Q14002 265 aa19.21■□□□□ 0.67
HOXC6-202ENST00000394331 HERC3Q15034 1050 aa19.21■□□□□ 0.67
HOXC6-202ENST00000394331 ZNF699Q32M78 642 aa19.21■□□□□ 0.67
HOXC6-202ENST00000394331 TTC30AQ86WT1 665 aa19.21■□□□□ 0.67
HOXC6-202ENST00000394331 MRPL46Q9H2W6 279 aaKnown RBP19.21■□□□□ 0.67
HOXC6-202ENST00000394331 TIMM22Q9Y584 194 aa19.21■□□□□ 0.67
HOXC6-202ENST00000394331 CXorf49A8MYA2 514 aaPredicted RBP19.21■□□□□ 0.67
HOXC6-202ENST00000394331 HTRA2O43464 458 aaPredicted RBP19.21■□□□□ 0.67
HOXC6-202ENST00000394331 BASP1P80723 227 aaKnown RBP19.21■□□□□ 0.67
HOXC6-202ENST00000394331 TFAMQ00059 246 aaKnown RBP19.21■□□□□ 0.67
HOXC6-202ENST00000394331 CD300CQ08708 224 aa19.21■□□□□ 0.67
HOXC6-202ENST00000394331 NRF1Q16656 503 aa19.21■□□□□ 0.67
HOXC6-202ENST00000394331 NHSL2Q5HYW2 709 aa19.21■□□□□ 0.67
HOXC6-202ENST00000394331 FGD3Q5JSP0 725 aa19.21■□□□□ 0.67
HOXC6-202ENST00000394331 WDTC1Q8N5D0 677 aa19.21■□□□□ 0.67
HOXC6-202ENST00000394331 ATP6V0D2Q8N8Y2 350 aa19.21■□□□□ 0.67
HOXC6-202ENST00000394331 TFAP2CQ92754 450 aa19.21■□□□□ 0.67
HOXC6-202ENST00000394331 LENG8Q96PV6 779 aaPredicted RBP19.21■□□□□ 0.67
HOXC6-202ENST00000394331 CDH19Q9H159 772 aa19.21■□□□□ 0.67
HOXC6-202ENST00000394331 CPQQ9Y646 472 aa19.21■□□□□ 0.67
HOXC6-202ENST00000394331 DYNC1LI2O43237 492 aaPredicted RBP19.21■□□□□ 0.67
HOXC6-202ENST00000394331 GLRA3O75311 464 aa19.21■□□□□ 0.67
HOXC6-202ENST00000394331 TNNC2P02585 160 aa19.21■□□□□ 0.67
HOXC6-202ENST00000394331 IREB2P48200 963 aaKnown RBP19.21■□□□□ 0.67
HOXC6-202ENST00000394331 CDH15P55291 814 aa19.21■□□□□ 0.67
HOXC6-202ENST00000394331 RNF149Q8NC42 400 aa19.21■□□□□ 0.67
HOXC6-202ENST00000394331 ACDQ96AP0 544 aa19.21■□□□□ 0.67
HOXC6-202ENST00000394331 LRRC39Q96DD0 335 aa19.21■□□□□ 0.67
HOXC6-202ENST00000394331 MMP19Q99542 508 aa19.21■□□□□ 0.67
HOXC6-202ENST00000394331 POPDC2Q9HBU9 364 aa19.21■□□□□ 0.67
HOXC6-202ENST00000394331 PNPOQ9NVS9 261 aa19.21■□□□□ 0.67
HOXC6-202ENST00000394331 CDY2AQ9Y6F7 541 aa19.21■□□□□ 0.67
HOXC6-202ENST00000394331 CDY1Q9Y6F8 540 aa19.21■□□□□ 0.67
HOXC6-202ENST00000394331 HMX2A2RU54 273 aa19.2■□□□□ 0.66
HOXC6-202ENST00000394331 SOWAHBA6NEL2 793 aa19.2■□□□□ 0.66
HOXC6-202ENST00000394331 CD247P20963 164 aa19.2■□□□□ 0.66
HOXC6-202ENST00000394331 TFAP2BQ92481 460 aa19.2■□□□□ 0.66
HOXC6-202ENST00000394331 EHD1Q9H4M9 534 aa19.2■□□□□ 0.66
HOXC6-202ENST00000394331 ANLNQ9NQW6 1124 aa19.2■□□□□ 0.66
HOXC6-202ENST00000394331 GPRC5DQ9NZD1 345 aa19.2■□□□□ 0.66
HOXC6-202ENST00000394331 EMCNQ9ULC0 261 aa19.2■□□□□ 0.66
HOXC6-202ENST00000394331 CORINQ9Y5Q5 1042 aa19.2■□□□□ 0.66
HOXC6-202ENST00000394331 TANC1Q9C0D5 1861 aa19.2■□□□□ 0.66
HOXC6-202ENST00000394331 MED7O43513 233 aa19.2■□□□□ 0.66
HOXC6-202ENST00000394331 ABCE1P61221 599 aaKnown RBP19.2■□□□□ 0.66
HOXC6-202ENST00000394331 BNIP3Q12983 259 aa19.2■□□□□ 0.66
HOXC6-202ENST00000394331 GADL1Q6ZQY3 521 aa19.2■□□□□ 0.66
HOXC6-202ENST00000394331 ITIH5Q86UX2 942 aa19.2■□□□□ 0.66
HOXC6-202ENST00000394331 PACRGLQ8N7B6 248 aa19.2■□□□□ 0.66
HOXC6-202ENST00000394331 LHX5Q9H2C1 402 aa19.2■□□□□ 0.66
HOXC6-202ENST00000394331 VRTNQ9H8Y1 702 aa19.2■□□□□ 0.66
HOXC6-202ENST00000394331 GGA3Q9NZ52 723 aa19.2■□□□□ 0.66
HOXC6-202ENST00000394331 FAM159BA6NKW6 160 aa19.19■□□□□ 0.66
HOXC6-202ENST00000394331 APOEP02649 317 aa19.19■□□□□ 0.66
HOXC6-202ENST00000394331 KRT7P08729 469 aa19.19■□□□□ 0.66
HOXC6-202ENST00000394331 MYF6P23409 242 aa19.19■□□□□ 0.66
HOXC6-202ENST00000394331 PIK3R1P27986 724 aa19.19■□□□□ 0.66
HOXC6-202ENST00000394331 PSMD8P48556 350 aa19.19■□□□□ 0.66
HOXC6-202ENST00000394331 YWHAZP63104 245 aaKnown RBP19.19■□□□□ 0.66
HOXC6-202ENST00000394331 NFATC3Q12968 1075 aa19.19■□□□□ 0.66
HOXC6-202ENST00000394331 BMPR2Q13873 1038 aa19.19■□□□□ 0.66
HOXC6-202ENST00000394331 PCLAFQ15004 111 aa19.19■□□□□ 0.66
HOXC6-202ENST00000394331 TXNRD3NBQ6F5E7 133 aa19.19■□□□□ 0.66
HOXC6-202ENST00000394331 DEFB132Q7Z7B7 95 aa19.19■□□□□ 0.66
HOXC6-202ENST00000394331 BHMTQ93088 406 aa19.19■□□□□ 0.66
HOXC6-202ENST00000394331 ALPK1Q96QP1 1244 aa19.19■□□□□ 0.66
HOXC6-202ENST00000394331 SLC4A5Q9BY07 1137 aa19.19■□□□□ 0.66
HOXC6-202ENST00000394331 TMX2-CTNND1H3BSU7 103 aa19.19■□□□□ 0.66
HOXC6-202ENST00000394331 B4GALT4O60513 344 aa19.19■□□□□ 0.66
HOXC6-202ENST00000394331 PLIN3O60664 434 aa19.19■□□□□ 0.66
HOXC6-202ENST00000394331 HOXC6P09630 235 aa19.19■□□□□ 0.66
HOXC6-202ENST00000394331 PSMA2P25787 234 aa19.19■□□□□ 0.66
HOXC6-202ENST00000394331 KPNA1P52294 538 aaPredicted RBP19.19■□□□□ 0.66
HOXC6-202ENST00000394331 TMBIM6P55061 237 aa19.19■□□□□ 0.66
HOXC6-202ENST00000394331 HADHQ16836 314 aaKnown RBP19.19■□□□□ 0.66
HOXC6-202ENST00000394331 MPZL3Q6UWV2 235 aa19.19■□□□□ 0.66
HOXC6-202ENST00000394331 IGFN1Q86VF2 1251 aa19.19■□□□□ 0.66
HOXC6-202ENST00000394331 UNC45BQ8IWX7 931 aa19.19■□□□□ 0.66
HOXC6-202ENST00000394331 THNSL1Q8IYQ7 743 aa19.19■□□□□ 0.66
HOXC6-202ENST00000394331 MFSD2AQ8NA29 543 aa19.19■□□□□ 0.66
HOXC6-202ENST00000394331 FAM47BQ8NA70 645 aa19.19■□□□□ 0.66
HOXC6-202ENST00000394331 CFAP36Q96G28 342 aa19.19■□□□□ 0.66
HOXC6-202ENST00000394331 XYLT2Q9H1B5 865 aa19.19■□□□□ 0.66
HOXC6-202ENST00000394331 MRPL40Q9NQ50 206 aaKnown RBP19.19■□□□□ 0.66
HOXC6-202ENST00000394331 DUS2Q9NX74 493 aaKnown RBP19.19■□□□□ 0.66
HOXC6-202ENST00000394331 ZC3H7BQ9UGR2 993 aaKnown RBP19.19■□□□□ 0.66
HOXC6-202ENST00000394331 AGTPBP1Q9UPW5 1226 aa19.19■□□□□ 0.66
HOXC6-202ENST00000394331 TNFRSF10AO00220 468 aa19.18■□□□□ 0.66
HOXC6-202ENST00000394331 AIM2O14862 343 aa19.18■□□□□ 0.66
HOXC6-202ENST00000394331 NOL3O60936 208 aaKnown RBP19.18■□□□□ 0.66
HOXC6-202ENST00000394331 TADA2AO75478 443 aa19.18■□□□□ 0.66
HOXC6-202ENST00000394331 KRT3P12035 628 aa19.18■□□□□ 0.66
HOXC6-202ENST00000394331 ASPAP45381 313 aa19.18■□□□□ 0.66
HOXC6-202ENST00000394331 RAB39AQ14964 217 aa19.18■□□□□ 0.66
HOXC6-202ENST00000394331 CYP4A22Q5TCH4 519 aa19.18■□□□□ 0.66
HOXC6-202ENST00000394331 PPP4R4Q6NUP7 873 aa19.18■□□□□ 0.66
HOXC6-202ENST00000394331 PEX5LQ8IYB4 626 aa19.18■□□□□ 0.66
HOXC6-202ENST00000394331 CADM3Q8N126 398 aa19.18■□□□□ 0.66
HOXC6-202ENST00000394331 SIX6OS1Q8N1H7 587 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms