RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 CNPY4Q8N129 248 aa15.37■□□□□ 0.05
GPC3-202ENST00000394299 RTL3Q8N8U3 475 aaKnown RBP15.37■□□□□ 0.05
GPC3-202ENST00000394299 CDKL2Q92772 493 aa15.37■□□□□ 0.05
GPC3-202ENST00000394299 IGSF8Q969P0 613 aa15.37■□□□□ 0.05
GPC3-202ENST00000394299 MTBPQ96DY7 904 aa15.37■□□□□ 0.05
GPC3-202ENST00000394299 ELAC1Q9H777 363 aaKnown RBP15.37■□□□□ 0.05
GPC3-202ENST00000394299 SCN5AQ14524 2016 aa15.37■□□□□ 0.05
GPC3-202ENST00000394299 MYO16Q9Y6X6 1858 aa15.37■□□□□ 0.05
GPC3-202ENST00000394299 C2CD2LO14523 706 aa15.36■□□□□ 0.05
GPC3-202ENST00000394299 PMPCBO75439 489 aa15.36■□□□□ 0.05
GPC3-202ENST00000394299 HAPLN1P10915 354 aaPredicted RBP15.36■□□□□ 0.05
GPC3-202ENST00000394299 SERPINB9P50453 376 aa15.36■□□□□ 0.05
GPC3-202ENST00000394299 PDE1BQ01064 536 aa15.36■□□□□ 0.05
GPC3-202ENST00000394299 RAP1GAP2Q684P5 730 aa15.36■□□□□ 0.05
GPC3-202ENST00000394299 CHSY1Q86X52 802 aa15.36■□□□□ 0.05
GPC3-202ENST00000394299 CCNJLQ8IV13 435 aa15.36■□□□□ 0.05
GPC3-202ENST00000394299 SPNS2Q8IVW8 549 aa15.36■□□□□ 0.05
GPC3-202ENST00000394299 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.36■□□□□ 0.05
GPC3-202ENST00000394299 TSGA13Q96PP4 275 aa15.36■□□□□ 0.05
GPC3-202ENST00000394299 KLHL5Q96PQ7 755 aa15.36■□□□□ 0.05
GPC3-202ENST00000394299 VAT1Q99536 393 aa15.36■□□□□ 0.05
GPC3-202ENST00000394299 CAB39LQ9H9S4 337 aa15.36■□□□□ 0.05
GPC3-202ENST00000394299 CDY1Q9Y6F8 540 aa15.36■□□□□ 0.05
GPC3-202ENST00000394299 USH1CQ9Y6N9 552 aa15.36■□□□□ 0.05
GPC3-202ENST00000394299 PATJQ8NI35 1801 aa15.36■□□□□ 0.05
GPC3-202ENST00000394299 MATN3O15232 486 aa15.36■□□□□ 0.05
GPC3-202ENST00000394299 RASSF9O75901 435 aa15.36■□□□□ 0.05
GPC3-202ENST00000394299 DNAJC8O75937 253 aaPredicted RBP15.36■□□□□ 0.05
GPC3-202ENST00000394299 GNRH1P01148 92 aa15.36■□□□□ 0.05
GPC3-202ENST00000394299 HNRNPH1P31943 449 aaKnown RBP15.36■□□□□ 0.05
GPC3-202ENST00000394299 CRHR1P34998 444 aa15.36■□□□□ 0.05
GPC3-202ENST00000394299 CHRNA4P43681 627 aa15.36■□□□□ 0.05
GPC3-202ENST00000394299 MAXP61244 160 aa15.36■□□□□ 0.05
GPC3-202ENST00000394299 COG7P83436 770 aa15.36■□□□□ 0.05
GPC3-202ENST00000394299 POU6F1Q14863 301 aa15.36■□□□□ 0.05
GPC3-202ENST00000394299 DLG2Q15700 870 aa15.36■□□□□ 0.05
GPC3-202ENST00000394299 CHI3L2Q15782 390 aa15.36■□□□□ 0.05
GPC3-202ENST00000394299 SPANXN3Q5MJ09 141 aa15.36■□□□□ 0.05
GPC3-202ENST00000394299 TEDDM1Q5T9Z0 273 aa15.36■□□□□ 0.05
GPC3-202ENST00000394299 STRA8Q7Z7C7 330 aa15.36■□□□□ 0.05
GPC3-202ENST00000394299 ZNF683Q8IZ20 524 aa15.36■□□□□ 0.05
GPC3-202ENST00000394299 IL12RB2Q99665 862 aa15.36■□□□□ 0.05
GPC3-202ENST00000394299 NAT9Q9BTE0 207 aa15.36■□□□□ 0.05
GPC3-202ENST00000394299 KCNK13Q9HB14 408 aa15.36■□□□□ 0.05
GPC3-202ENST00000394299 GLOD4Q9HC38 313 aa15.36■□□□□ 0.05
GPC3-202ENST00000394299 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.36■□□□□ 0.05
GPC3-202ENST00000394299 IPO11Q9UI26 975 aaKnown RBP15.36■□□□□ 0.05
GPC3-202ENST00000394299 EMCNQ9ULC0 261 aa15.36■□□□□ 0.05
GPC3-202ENST00000394299 SLC12A8A0AV02 714 aa15.35■□□□□ 0.05
GPC3-202ENST00000394299 FGF10O15520 208 aaPredicted RBP15.35■□□□□ 0.05
GPC3-202ENST00000394299 TBC1D4O60343 1298 aa15.35■□□□□ 0.05
GPC3-202ENST00000394299 GSRP00390 522 aa15.35■□□□□ 0.05
GPC3-202ENST00000394299 COL6A1P12109 1028 aa15.35■□□□□ 0.05
GPC3-202ENST00000394299 MAP2K2P36507 400 aa15.35■□□□□ 0.05
GPC3-202ENST00000394299 MAGEA11P43364 429 aa15.35■□□□□ 0.05
GPC3-202ENST00000394299 BST1Q10588 318 aa15.35■□□□□ 0.05
GPC3-202ENST00000394299 GPR17Q13304 367 aa15.35■□□□□ 0.05
GPC3-202ENST00000394299 TIFABQ6ZNK6 161 aa15.35■□□□□ 0.05
GPC3-202ENST00000394299 NLRP9Q7RTR0 991 aa15.35■□□□□ 0.05
GPC3-202ENST00000394299 MTDHQ86UE4 582 aaKnown RBP15.35■□□□□ 0.05
GPC3-202ENST00000394299 NPAS4Q8IUM7 802 aa15.35■□□□□ 0.05
GPC3-202ENST00000394299 HMCESQ96FZ2 354 aa15.35■□□□□ 0.05
GPC3-202ENST00000394299 FICDQ9BVA6 458 aa15.35■□□□□ 0.05
GPC3-202ENST00000394299 IARS2Q9NSE4 1012 aaKnown RBP15.35■□□□□ 0.05
GPC3-202ENST00000394299 C20orf96Q9NUD7 363 aaPredicted RBP15.35■□□□□ 0.05
GPC3-202ENST00000394299 IL37Q9NZH6 218 aa15.35■□□□□ 0.05
GPC3-202ENST00000394299 MARCH2Q9P0N8 246 aa15.35■□□□□ 0.05
GPC3-202ENST00000394299 MTO1Q9Y2Z2 717 aaKnown RBP15.35■□□□□ 0.05
GPC3-202ENST00000394299 FAM237BA0A1B0GVD1 139 aa15.35■□□□□ 0.05
GPC3-202ENST00000394299 OR6C75A6NL08 312 aa15.35■□□□□ 0.05
GPC3-202ENST00000394299 CACNG3O60359 315 aa15.35■□□□□ 0.05
GPC3-202ENST00000394299 KITP10721 976 aa15.35■□□□□ 0.05
GPC3-202ENST00000394299 ATF6P18850 670 aa15.35■□□□□ 0.05
GPC3-202ENST00000394299 TMPRSS15P98073 1019 aa15.35■□□□□ 0.05
GPC3-202ENST00000394299 SLC20A2Q08357 652 aa15.35■□□□□ 0.05
GPC3-202ENST00000394299 PRPSAP1Q14558 356 aa15.35■□□□□ 0.05
GPC3-202ENST00000394299 IHHQ14623 411 aa15.35■□□□□ 0.05
GPC3-202ENST00000394299 PCSK7Q16549 785 aa15.35■□□□□ 0.05
GPC3-202ENST00000394299 N4BP2L1Q5TBK1 243 aaPredicted RBP15.35■□□□□ 0.05
GPC3-202ENST00000394299 AFMIDQ63HM1 303 aa15.35■□□□□ 0.05
GPC3-202ENST00000394299 DENND5AQ6IQ26 1287 aa15.35■□□□□ 0.05
GPC3-202ENST00000394299 FBXL22Q6P050 247 aa15.35■□□□□ 0.05
GPC3-202ENST00000394299 MSANTD2Q6P1R3 559 aa15.35■□□□□ 0.05
GPC3-202ENST00000394299 NUDCD3Q8IVD9 361 aa15.35■□□□□ 0.05
GPC3-202ENST00000394299 DCLK2Q8N568 766 aa15.35■□□□□ 0.05
GPC3-202ENST00000394299 PNPLA1Q8N8W4 532 aa15.35■□□□□ 0.05
GPC3-202ENST00000394299 PRR11Q96HE9 360 aaPredicted RBP15.35■□□□□ 0.05
GPC3-202ENST00000394299 LRRC37BQ96QE4 947 aa15.35■□□□□ 0.05
GPC3-202ENST00000394299 USP1O94782 785 aa15.34■□□□□ 0.05
GPC3-202ENST00000394299 PRKCGP05129 697 aa15.34■□□□□ 0.05
GPC3-202ENST00000394299 GSTA1P08263 222 aa15.34■□□□□ 0.05
GPC3-202ENST00000394299 KCNA4P22459 653 aa15.34■□□□□ 0.05
GPC3-202ENST00000394299 TARSP26639 723 aaKnown RBP15.34■□□□□ 0.05
GPC3-202ENST00000394299 KCNQ1P51787 676 aa15.34■□□□□ 0.05
GPC3-202ENST00000394299 CDH17Q12864 832 aa15.34■□□□□ 0.05
GPC3-202ENST00000394299 ZNF354CQ86Y25 554 aa15.34■□□□□ 0.05
GPC3-202ENST00000394299 PLD6Q8N2A8 252 aaKnown RBP15.34■□□□□ 0.05
GPC3-202ENST00000394299 E2F7Q96AV8 911 aa15.34■□□□□ 0.05
GPC3-202ENST00000394299 RNF208Q9H0X6 261 aa15.34■□□□□ 0.05
GPC3-202ENST00000394299 HIPK3Q9H422 1215 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms