RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 RGS17Q9UGC6 210 aaPredicted RBP13.61□□□□□ -0.23
USP49-203ENST00000394253 LRRIQ1Q96JM4 1722 aa13.61□□□□□ -0.23
USP49-203ENST00000394253 KANTRA0A1W2PQU2 76 aa13.6□□□□□ -0.23
USP49-203ENST00000394253 MCIDASD6RGH6 385 aa13.6□□□□□ -0.23
USP49-203ENST00000394253 SRGNP10124 158 aa13.6□□□□□ -0.23
USP49-203ENST00000394253 E2F2Q14209 437 aa13.6□□□□□ -0.23
USP49-203ENST00000394253 PREPLQ4J6C6 727 aaPredicted RBP13.6□□□□□ -0.23
USP49-203ENST00000394253 RUSC1Q9BVN2 902 aa13.6□□□□□ -0.23
USP49-203ENST00000394253 IFT46Q9NQC8 304 aa13.6□□□□□ -0.23
USP49-203ENST00000394253 BSDC1Q9NW68 430 aaPredicted RBP13.6□□□□□ -0.23
USP49-203ENST00000394253 AFDNP55196 1824 aaKnown RBP13.6□□□□□ -0.23
USP49-203ENST00000394253 CCNG2Q16589 344 aa13.6□□□□□ -0.23
USP49-203ENST00000394253 SRBD1Q8N5C6 995 aaKnown RBP13.6□□□□□ -0.23
USP49-203ENST00000394253 CCDC107Q8WV48 283 aa13.6□□□□□ -0.23
USP49-203ENST00000394253 UBE2E3Q969T4 207 aa13.6□□□□□ -0.23
USP49-203ENST00000394253 TBATAQ96M53 351 aa13.6□□□□□ -0.23
USP49-203ENST00000394253 ZNF471Q9BX82 626 aaPredicted RBP13.6□□□□□ -0.23
USP49-203ENST00000394253 CLIC5Q9NZA1 410 aa13.6□□□□□ -0.23
USP49-203ENST00000394253 TRIM64A6NGJ6 449 aa13.6□□□□□ -0.23
USP49-203ENST00000394253 TRIM38O00635 465 aa13.6□□□□□ -0.23
USP49-203ENST00000394253 NTSP30990 170 aa13.6□□□□□ -0.23
USP49-203ENST00000394253 SLC11A2P49281 568 aa13.6□□□□□ -0.23
USP49-203ENST00000394253 TMEM132BQ14DG7 1078 aa13.6□□□□□ -0.23
USP49-203ENST00000394253 CRTC3Q6UUV7 619 aa13.6□□□□□ -0.23
USP49-203ENST00000394253 LHFPL3Q86UP9 236 aa13.6□□□□□ -0.23
USP49-203ENST00000394253 SLC4A11Q8NBS3 891 aa13.6□□□□□ -0.23
USP49-203ENST00000394253 TRIM9Q9C026 710 aa13.6□□□□□ -0.23
USP49-203ENST00000394253 MTMR10Q9NXD2 777 aa13.6□□□□□ -0.23
USP49-203ENST00000394253 MROH7-TTC4A0A0A0MT08 1334 aa13.6□□□□□ -0.23
USP49-203ENST00000394253 PSMG1O95456 288 aa13.6□□□□□ -0.23
USP49-203ENST00000394253 PCCAP05165 728 aaPredicted RBP13.6□□□□□ -0.23
USP49-203ENST00000394253 ATP6V0D2Q8N8Y2 350 aa13.6□□□□□ -0.23
USP49-203ENST00000394253 HDAC7Q8WUI4 952 aa13.6□□□□□ -0.23
USP49-203ENST00000394253 REXO2Q9Y3B8 237 aaKnown RBP13.6□□□□□ -0.23
USP49-203ENST00000394253 PLEKHA8P1O95397 391 aa13.6□□□□□ -0.23
USP49-203ENST00000394253 RLN2P04090 185 aa13.6□□□□□ -0.23
USP49-203ENST00000394253 EPHB2P29323 1055 aa13.6□□□□□ -0.23
USP49-203ENST00000394253 SPIDRQ14159 915 aa13.6□□□□□ -0.23
USP49-203ENST00000394253 BTBD9Q96Q07 612 aa13.6□□□□□ -0.23
USP49-203ENST00000394253 SUCOQ9UBS9 1254 aaKnown RBP13.6□□□□□ -0.23
USP49-203ENST00000394253 GNEQ9Y223 722 aaKnown RBP13.6□□□□□ -0.23
USP49-203ENST00000394253 FARSAQ9Y285 508 aaKnown RBP13.6□□□□□ -0.23
USP49-203ENST00000394253 PAGE2BQ5JRK9 111 aa13.6□□□□□ -0.23
USP49-203ENST00000394253 PIK3R6Q5UE93 754 aa13.6□□□□□ -0.23
USP49-203ENST00000394253 FBXO39Q8N4B4 442 aa13.6□□□□□ -0.23
USP49-203ENST00000394253 GPER1Q99527 375 aa13.6□□□□□ -0.23
USP49-203ENST00000394253 SMURF2Q9HAU4 748 aa13.6□□□□□ -0.23
USP49-203ENST00000394253 NMRAL1Q9HBL8 299 aa13.6□□□□□ -0.23
USP49-203ENST00000394253 IGSF9BQ9UPX0 1349 aa13.6□□□□□ -0.23
USP49-203ENST00000394253 PPEF1O14829 653 aaPredicted RBP13.6□□□□□ -0.23
USP49-203ENST00000394253 F8A1P23610 371 aa13.6□□□□□ -0.23
USP49-203ENST00000394253 RGS7P49802 495 aa13.6□□□□□ -0.23
USP49-203ENST00000394253 ARMC10Q8N2F6 343 aa13.6□□□□□ -0.23
USP49-203ENST00000394253 FBXO36Q8NEA4 188 aa13.6□□□□□ -0.23
USP49-203ENST00000394253 ACOX2Q99424 681 aa13.6□□□□□ -0.23
USP49-203ENST00000394253 MGME1Q9BQP7 344 aa13.6□□□□□ -0.23
USP49-203ENST00000394253 SHROOM3Q8TF72 1996 aa13.6□□□□□ -0.23
USP49-203ENST00000394253 SLC10A7Q0GE19 358 aa13.59□□□□□ -0.23
USP49-203ENST00000394253 GXYLT1Q4G148 440 aa13.59□□□□□ -0.23
USP49-203ENST00000394253 BSNDQ8WZ55 320 aa13.59□□□□□ -0.23
USP49-203ENST00000394253 REXO5Q96IC2 774 aaKnown RBP13.59□□□□□ -0.23
USP49-203ENST00000394253 GIN1Q9NXP7 522 aa13.59□□□□□ -0.23
USP49-203ENST00000394253 ANGPT4Q9Y264 503 aa13.59□□□□□ -0.23
USP49-203ENST00000394253 STMND1H3BQB6 276 aa13.59□□□□□ -0.23
USP49-203ENST00000394253 DPYSQ14117 519 aa13.59□□□□□ -0.23
USP49-203ENST00000394253 DENND5BQ6ZUT9 1274 aa13.59□□□□□ -0.23
USP49-203ENST00000394253 EXD2Q9NVH0 621 aa13.59□□□□□ -0.23
USP49-203ENST00000394253 BARHL2Q9NY43 387 aa13.59□□□□□ -0.23
USP49-203ENST00000394253 MBTD1Q05BQ5 628 aa13.59□□□□□ -0.23
USP49-203ENST00000394253 NAB1Q13506 487 aa13.59□□□□□ -0.23
USP49-203ENST00000394253 NR1I3Q14994 352 aa13.59□□□□□ -0.23
USP49-203ENST00000394253 SLC25A25Q6KCM7 469 aa13.59□□□□□ -0.23
USP49-203ENST00000394253 BRINP3Q76B58 766 aa13.59□□□□□ -0.23
USP49-203ENST00000394253 MCCC1Q96RQ3 725 aaPredicted RBP13.59□□□□□ -0.23
USP49-203ENST00000394253 SEMA6AQ9H2E6 1030 aa13.59□□□□□ -0.23
USP49-203ENST00000394253 SCAF8Q9UPN6 1271 aaKnown RBP13.59□□□□□ -0.23
USP49-203ENST00000394253 SEC22BO75396 215 aa13.59□□□□□ -0.23
USP49-203ENST00000394253 GCP02774 474 aa13.59□□□□□ -0.23
USP49-203ENST00000394253 SLC9A3P48764 834 aa13.59□□□□□ -0.23
USP49-203ENST00000394253 TMEM17Q86X19 198 aa13.59□□□□□ -0.23
USP49-203ENST00000394253 OR2L3Q8NG85 312 aa13.59□□□□□ -0.23
USP49-203ENST00000394253 PDLIM2Q96JY6 352 aa13.59□□□□□ -0.23
USP49-203ENST00000394253 PHF20Q9BVI0 1012 aa13.59□□□□□ -0.23
USP49-203ENST00000394253 NOL11Q9H8H0 719 aaKnown RBP13.59□□□□□ -0.23
USP49-203ENST00000394253 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.59□□□□□ -0.23
USP49-203ENST00000394253 B8ZZF3 427 aa13.59□□□□□ -0.23
USP49-203ENST00000394253 BPNT1O95861 308 aa13.59□□□□□ -0.23
USP49-203ENST00000394253 FGFR2P21802 821 aa13.59□□□□□ -0.23
USP49-203ENST00000394253 GDI2P50395 445 aaKnown RBP13.59□□□□□ -0.23
USP49-203ENST00000394253 ZNF177Q13360 481 aaPredicted RBP13.59□□□□□ -0.23
USP49-203ENST00000394253 TOMM20Q15388 145 aa13.59□□□□□ -0.23
USP49-203ENST00000394253 CYP2R1Q6VVX0 501 aa13.59□□□□□ -0.23
USP49-203ENST00000394253 CAVIN3Q969G5 261 aa13.59□□□□□ -0.23
USP49-203ENST00000394253 APOPT1Q96IL0 206 aa13.59□□□□□ -0.23
USP49-203ENST00000394253 GABBR1Q9UBS5 961 aa13.59□□□□□ -0.23
USP49-203ENST00000394253 OGDHLQ9ULD0 1010 aa13.59□□□□□ -0.23
USP49-203ENST00000394253 PRAMEF33A0A0G2JMD5 474 aa13.59□□□□□ -0.23
USP49-203ENST00000394253 PRAMEF10O60809 474 aa13.59□□□□□ -0.23
USP49-203ENST00000394253 THEGLP0DJG4 465 aa13.59□□□□□ -0.23
USP49-203ENST00000394253 SRCP12931 536 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms