RNA–Protein interactions for RNA: ENST00000393860.7

RAB5C-202, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-202ENST00000393860 CASC4Q6P4E1 433 aa20.08■□□□□ 0.81
RAB5C-202ENST00000393860 PRPF39Q86UA1 669 aaKnown RBP20.08■□□□□ 0.81
RAB5C-202ENST00000393860 MAB21L3Q8N8X9 362 aa20.08■□□□□ 0.81
RAB5C-202ENST00000393860 PABPC5Q96DU9 382 aaKnown RBP20.08■□□□□ 0.81
RAB5C-202ENST00000393860 LRRC3Q9BY71 257 aa20.08■□□□□ 0.81
RAB5C-202ENST00000393860 ACSS3Q9H6R3 686 aa20.08■□□□□ 0.81
RAB5C-202ENST00000393860 SP110Q9HB58 689 aa20.08■□□□□ 0.81
RAB5C-202ENST00000393860 CPQQ9Y646 472 aa20.08■□□□□ 0.81
RAB5C-202ENST00000393860 A0A1W2PRU2 124 aa20.08■□□□□ 0.8
RAB5C-202ENST00000393860 CDH16O75309 829 aa20.08■□□□□ 0.8
RAB5C-202ENST00000393860 RFPL2O75678 378 aa20.08■□□□□ 0.8
RAB5C-202ENST00000393860 NEBLO76041 1014 aa20.08■□□□□ 0.8
RAB5C-202ENST00000393860 CA3P07451 260 aa20.08■□□□□ 0.8
RAB5C-202ENST00000393860 CREB1P16220 341 aa20.08■□□□□ 0.8
RAB5C-202ENST00000393860 HDCP19113 662 aa20.08■□□□□ 0.8
RAB5C-202ENST00000393860 SKOR1P84550 965 aa20.08■□□□□ 0.8
RAB5C-202ENST00000393860 GUCY1A3Q02108 690 aa20.08■□□□□ 0.8
RAB5C-202ENST00000393860 UNC5AQ6ZN44 842 aa20.08■□□□□ 0.8
RAB5C-202ENST00000393860 EXOC3L1Q86VI1 746 aa20.08■□□□□ 0.8
RAB5C-202ENST00000393860 OR52K2Q8NGK3 314 aa20.08■□□□□ 0.8
RAB5C-202ENST00000393860 MDM1Q8TC05 714 aa20.08■□□□□ 0.8
RAB5C-202ENST00000393860 ARHGEF2Q92974 986 aaKnown RBP20.08■□□□□ 0.8
RAB5C-202ENST00000393860 EBNA1BP2Q99848 306 aaKnown RBP20.08■□□□□ 0.8
RAB5C-202ENST00000393860 ATXN3LQ9H3M9 355 aa20.08■□□□□ 0.8
RAB5C-202ENST00000393860 GLOD4Q9HC38 313 aa20.08■□□□□ 0.8
RAB5C-202ENST00000393860 SYBUQ9NX95 663 aa20.08■□□□□ 0.8
RAB5C-202ENST00000393860 EURLQ9NYK6 297 aa20.08■□□□□ 0.8
RAB5C-202ENST00000393860 LGALS13Q9UHV8 139 aa20.08■□□□□ 0.8
RAB5C-202ENST00000393860 ASB3Q9Y575 518 aa20.08■□□□□ 0.8
RAB5C-202ENST00000393860 PEX11BO96011 259 aa20.07■□□□□ 0.8
RAB5C-202ENST00000393860 MT-CYBP00156 380 aaPredicted RBP20.07■□□□□ 0.8
RAB5C-202ENST00000393860 CLCN4P51793 760 aa20.07■□□□□ 0.8
RAB5C-202ENST00000393860 CAMK1Q14012 370 aa20.07■□□□□ 0.8
RAB5C-202ENST00000393860 SMAD1Q15797 465 aaKnown RBP20.07■□□□□ 0.8
RAB5C-202ENST00000393860 PABPC1LQ4VXU2 614 aaKnown RBP20.07■□□□□ 0.8
RAB5C-202ENST00000393860 PPM1LQ5SGD2 360 aa20.07■□□□□ 0.8
RAB5C-202ENST00000393860 KCTD11Q693B1 232 aa20.07■□□□□ 0.8
RAB5C-202ENST00000393860 ADAMTS19Q8TE59 1207 aa20.07■□□□□ 0.8
RAB5C-202ENST00000393860 CAPS2Q9BXY5 557 aa20.07■□□□□ 0.8
RAB5C-202ENST00000393860 STMN4Q9H169 189 aaPredicted RBP20.07■□□□□ 0.8
RAB5C-202ENST00000393860 IRAK3Q9Y616 596 aa20.07■□□□□ 0.8
RAB5C-202ENST00000393860 MAPKAPK2P49137 400 aa20.06■□□□□ 0.8
RAB5C-202ENST00000393860 GEMIN4P57678 1058 aaKnown RBP20.06■□□□□ 0.8
RAB5C-202ENST00000393860 GNGT1P63211 74 aa20.06■□□□□ 0.8
RAB5C-202ENST00000393860 SLC10A7Q0GE19 358 aa20.06■□□□□ 0.8
RAB5C-202ENST00000393860 MTA1Q13330 715 aa20.06■□□□□ 0.8
RAB5C-202ENST00000393860 PRPSAP1Q14558 356 aa20.06■□□□□ 0.8
RAB5C-202ENST00000393860 KBTBD12Q3ZCT8 623 aa20.06■□□□□ 0.8
RAB5C-202ENST00000393860 ACBD5Q5T8D3 534 aaPredicted RBP20.06■□□□□ 0.8
RAB5C-202ENST00000393860 ELMOD1Q8N336 334 aa20.06■□□□□ 0.8
RAB5C-202ENST00000393860 MRPS31Q92665 395 aaKnown RBP20.06■□□□□ 0.8
RAB5C-202ENST00000393860 STAMBPL1Q96FJ0 436 aa20.06■□□□□ 0.8
RAB5C-202ENST00000393860 PAFAH2Q99487 392 aa20.06■□□□□ 0.8
RAB5C-202ENST00000393860 DENND4CQ5VZ89 1909 aa20.06■□□□□ 0.8
RAB5C-202ENST00000393860 CHD7Q9P2D1 2997 aa20.06■□□□□ 0.8
RAB5C-202ENST00000393860 A0A0D9SEW6 157 aa20.06■□□□□ 0.8
RAB5C-202ENST00000393860 CKMP06732 381 aa20.06■□□□□ 0.8
RAB5C-202ENST00000393860 MLNP12872 115 aa20.06■□□□□ 0.8
RAB5C-202ENST00000393860 EPCAMP16422 314 aa20.06■□□□□ 0.8
RAB5C-202ENST00000393860 TSHRP16473 764 aa20.06■□□□□ 0.8
RAB5C-202ENST00000393860 ETFBP38117 255 aa20.06■□□□□ 0.8
RAB5C-202ENST00000393860 MAXP61244 160 aa20.06■□□□□ 0.8
RAB5C-202ENST00000393860 CBLBQ13191 982 aa20.06■□□□□ 0.8
RAB5C-202ENST00000393860 KLHL38Q2WGJ6 581 aa20.06■□□□□ 0.8
RAB5C-202ENST00000393860 C5orf22Q49AR2 442 aa20.06■□□□□ 0.8
RAB5C-202ENST00000393860 RABGAP1LQ5R372 815 aa20.06■□□□□ 0.8
RAB5C-202ENST00000393860 DNAAF3Q8N9W5 541 aa20.06■□□□□ 0.8
RAB5C-202ENST00000393860 OR7D4Q8NG98 312 aa20.06■□□□□ 0.8
RAB5C-202ENST00000393860 MAML1Q92585 1016 aa20.06■□□□□ 0.8
RAB5C-202ENST00000393860 LRRC39Q96DD0 335 aa20.06■□□□□ 0.8
RAB5C-202ENST00000393860 CERS4Q9HA82 394 aa20.06■□□□□ 0.8
RAB5C-202ENST00000393860 NT5MQ9NPB1 228 aa20.06■□□□□ 0.8
RAB5C-202ENST00000393860 MAN1C1Q9NR34 630 aa20.06■□□□□ 0.8
RAB5C-202ENST00000393860 DOCK6Q96HP0 2047 aa20.05■□□□□ 0.8
RAB5C-202ENST00000393860 TTC24A2A3L6 582 aaPredicted RBP20.05■□□□□ 0.8
RAB5C-202ENST00000393860 LPXNO60711 386 aa20.05■□□□□ 0.8
RAB5C-202ENST00000393860 SUN1O94901 812 aa20.05■□□□□ 0.8
RAB5C-202ENST00000393860 MMP13P45452 471 aa20.05■□□□□ 0.8
RAB5C-202ENST00000393860 SHHQ15465 462 aa20.05■□□□□ 0.8
RAB5C-202ENST00000393860 ANO4Q32M45 955 aa20.05■□□□□ 0.8
RAB5C-202ENST00000393860 ADGRF1Q5T601 910 aa20.05■□□□□ 0.8
RAB5C-202ENST00000393860 TRMT10BQ6PF06 316 aaKnown RBP20.05■□□□□ 0.8
RAB5C-202ENST00000393860 CES3Q6UWW8 571 aa20.05■□□□□ 0.8
RAB5C-202ENST00000393860 SRRM1Q8IYB3 904 aaKnown RBP20.05■□□□□ 0.8
RAB5C-202ENST00000393860 UNC5BQ8IZJ1 945 aa20.05■□□□□ 0.8
RAB5C-202ENST00000393860 ARFGAP2Q8N6H7 521 aa20.05■□□□□ 0.8
RAB5C-202ENST00000393860 IPMKQ8NFU5 416 aa20.05■□□□□ 0.8
RAB5C-202ENST00000393860 SMG9Q9H0W8 520 aaKnown RBP20.05■□□□□ 0.8
RAB5C-202ENST00000393860 DONSONQ9NYP3 566 aa20.05■□□□□ 0.8
RAB5C-202ENST00000393860 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.05■□□□□ 0.8
RAB5C-202ENST00000393860 PSMC3IPQ9P2W1 217 aaPredicted RBP20.05■□□□□ 0.8
RAB5C-202ENST00000393860 RWDD3Q9Y3V2 267 aa20.05■□□□□ 0.8
RAB5C-202ENST00000393860 SDR42E2A6NKP2 422 aa20.04■□□□□ 0.8
RAB5C-202ENST00000393860 H3BNC9 293 aa20.04■□□□□ 0.8
RAB5C-202ENST00000393860 PER2O15055 1255 aa20.04■□□□□ 0.8
RAB5C-202ENST00000393860 OLFM2O95897 454 aa20.04■□□□□ 0.8
RAB5C-202ENST00000393860 TPH1P17752 444 aa20.04■□□□□ 0.8
RAB5C-202ENST00000393860 CCR2P41597 374 aa20.04■□□□□ 0.8
RAB5C-202ENST00000393860 ITKQ08881 620 aa20.04■□□□□ 0.8
RAB5C-202ENST00000393860 SERINC3Q13530 473 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms