RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 DDNO94850 711 aaPredicted RBP19.21■□□□□ 0.67
CBX1-202ENST00000393408 AMHP03971 560 aa19.21■□□□□ 0.67
CBX1-202ENST00000393408 CD1EP15812 388 aa19.21■□□□□ 0.67
CBX1-202ENST00000393408 SMPD1P17405 629 aa19.21■□□□□ 0.67
CBX1-202ENST00000393408 VCLP18206 1134 aa19.21■□□□□ 0.67
CBX1-202ENST00000393408 AIF1P55008 147 aa19.21■□□□□ 0.67
CBX1-202ENST00000393408 SCAPQ12770 1279 aa19.21■□□□□ 0.67
CBX1-202ENST00000393408 CLEC20AQ6ZU45 233 aa19.21■□□□□ 0.67
CBX1-202ENST00000393408 ST13P4Q8IZP2 240 aaPredicted RBP19.21■□□□□ 0.67
CBX1-202ENST00000393408 CNDP1Q96KN2 507 aa19.21■□□□□ 0.67
CBX1-202ENST00000393408 C20orf96Q9NUD7 363 aaPredicted RBP19.21■□□□□ 0.67
CBX1-202ENST00000393408 CPSF2Q9P2I0 782 aaKnown RBP19.21■□□□□ 0.67
CBX1-202ENST00000393408 MAGEB16A2A368 324 aa19.2■□□□□ 0.66
CBX1-202ENST00000393408 RRN3P2A6NIE6 340 aa19.2■□□□□ 0.66
CBX1-202ENST00000393408 MATN2O00339 956 aa19.2■□□□□ 0.66
CBX1-202ENST00000393408 NRP1O14786 923 aa19.2■□□□□ 0.66
CBX1-202ENST00000393408 NCAM2O15394 837 aa19.2■□□□□ 0.66
CBX1-202ENST00000393408 CHRNGP07510 517 aa19.2■□□□□ 0.66
CBX1-202ENST00000393408 MPSTP25325 297 aa19.2■□□□□ 0.66
CBX1-202ENST00000393408 PIK3R1P27986 724 aa19.2■□□□□ 0.66
CBX1-202ENST00000393408 NPY2RP49146 381 aa19.2■□□□□ 0.66
CBX1-202ENST00000393408 LILRA4P59901 499 aa19.2■□□□□ 0.66
CBX1-202ENST00000393408 TPI1P60174 286 aa19.2■□□□□ 0.66
CBX1-202ENST00000393408 RPL26P61254 145 aaKnown RBP19.2■□□□□ 0.66
CBX1-202ENST00000393408 CCNA1P78396 465 aa19.2■□□□□ 0.66
CBX1-202ENST00000393408 CDC42EP1Q00587 391 aa19.2■□□□□ 0.66
CBX1-202ENST00000393408 DLG1Q12959 904 aa19.2■□□□□ 0.66
CBX1-202ENST00000393408 ZBTB17Q13105 803 aa19.2■□□□□ 0.66
CBX1-202ENST00000393408 TTLL12Q14166 644 aaPredicted RBP19.2■□□□□ 0.66
CBX1-202ENST00000393408 GRM2Q14416 872 aa19.2■□□□□ 0.66
CBX1-202ENST00000393408 PCBP1Q15365 356 aaKnown RBP eCLIP19.2■□□□□ 0.66
CBX1-202ENST00000393408 LIN52Q52LA3 116 aa19.2■□□□□ 0.66
CBX1-202ENST00000393408 TOP6BLQ8N6T0 577 aa19.2■□□□□ 0.66
CBX1-202ENST00000393408 ADAM32Q8TC27 787 aa19.2■□□□□ 0.66
CBX1-202ENST00000393408 CHRAC1Q9NRG0 131 aa19.2■□□□□ 0.66
CBX1-202ENST00000393408 IARS2Q9NSE4 1012 aaKnown RBP19.2■□□□□ 0.66
CBX1-202ENST00000393408 MID2Q9UJV3 735 aa19.2■□□□□ 0.66
CBX1-202ENST00000393408 SHROOM3Q8TF72 1996 aa19.2■□□□□ 0.66
CBX1-202ENST00000393408 SNUPNO95149 360 aaKnown RBP19.2■□□□□ 0.66
CBX1-202ENST00000393408 APOA4P06727 396 aa19.2■□□□□ 0.66
CBX1-202ENST00000393408 THRAP10827 490 aa19.2■□□□□ 0.66
CBX1-202ENST00000393408 PTPN1P18031 435 aaKnown RBP19.2■□□□□ 0.66
CBX1-202ENST00000393408 SERPINB5P36952 375 aa19.2■□□□□ 0.66
CBX1-202ENST00000393408 HCAR3P49019 387 aa19.2■□□□□ 0.66
CBX1-202ENST00000393408 TKTL1P51854 596 aa19.2■□□□□ 0.66
CBX1-202ENST00000393408 ITGA7Q13683 1181 aa19.2■□□□□ 0.66
CBX1-202ENST00000393408 TMEM151AQ8N4L1 468 aa19.2■□□□□ 0.66
CBX1-202ENST00000393408 CENPKQ9BS16 269 aa19.2■□□□□ 0.66
CBX1-202ENST00000393408 ACE2Q9BYF1 805 aaPredicted RBP19.2■□□□□ 0.66
CBX1-202ENST00000393408 DRC3Q9H069 523 aa19.2■□□□□ 0.66
CBX1-202ENST00000393408 WDR55Q9H6Y2 383 aaPredicted RBP19.2■□□□□ 0.66
CBX1-202ENST00000393408 MAGED2Q9UNF1 606 aaPredicted RBP19.2■□□□□ 0.66
CBX1-202ENST00000393408 RAP2CQ9Y3L5 183 aa19.2■□□□□ 0.66
CBX1-202ENST00000393408 GOLGA8QA0A0J9YX86 632 aa19.19■□□□□ 0.66
CBX1-202ENST00000393408 GOLGA8OA6NCC3 632 aa19.19■□□□□ 0.66
CBX1-202ENST00000393408 GOLGA8NF8WBI6 632 aa19.19■□□□□ 0.66
CBX1-202ENST00000393408 NFKB1P19838 968 aa19.19■□□□□ 0.66
CBX1-202ENST00000393408 DGKDQ16760 1214 aa19.19■□□□□ 0.66
CBX1-202ENST00000393408 CNPY1Q3B7I2 92 aa19.19■□□□□ 0.66
CBX1-202ENST00000393408 DUSP28Q4G0W2 176 aa19.19■□□□□ 0.66
CBX1-202ENST00000393408 OGFRL1Q5TC84 451 aaPredicted RBP19.19■□□□□ 0.66
CBX1-202ENST00000393408 MAP3K21Q5TCX8 1036 aa19.19■□□□□ 0.66
CBX1-202ENST00000393408 ZYG11AQ6WRX3 759 aa19.19■□□□□ 0.66
CBX1-202ENST00000393408 GPRC5AQ8NFJ5 357 aa19.19■□□□□ 0.66
CBX1-202ENST00000393408 OR6J1Q8NGC5 347 aa19.19■□□□□ 0.66
CBX1-202ENST00000393408 RDH11Q8TC12 318 aa19.19■□□□□ 0.66
CBX1-202ENST00000393408 HDAC11Q96DB2 347 aa19.19■□□□□ 0.66
CBX1-202ENST00000393408 MOCOSQ96EN8 888 aa19.19■□□□□ 0.66
CBX1-202ENST00000393408 APOL2Q9BQE5 337 aa19.19■□□□□ 0.66
CBX1-202ENST00000393408 SPATA16Q9BXB7 569 aa19.19■□□□□ 0.66
CBX1-202ENST00000393408 C1QTNF1Q9BXJ1 281 aa19.19■□□□□ 0.66
CBX1-202ENST00000393408 BRD8Q9H0E9 1235 aa19.19■□□□□ 0.66
CBX1-202ENST00000393408 STK39Q9UEW8 545 aa19.19■□□□□ 0.66
CBX1-202ENST00000393408 TRHDEQ9UKU6 1024 aa19.19■□□□□ 0.66
CBX1-202ENST00000393408 PRPF19Q9UMS4 504 aaKnown RBP19.19■□□□□ 0.66
CBX1-202ENST00000393408 HDAC3O15379 428 aa19.19■□□□□ 0.66
CBX1-202ENST00000393408 MTSS1O43312 755 aa19.19■□□□□ 0.66
CBX1-202ENST00000393408 SBK3P0C264 359 aa19.19■□□□□ 0.66
CBX1-202ENST00000393408 CYP2C9P11712 490 aa19.19■□□□□ 0.66
CBX1-202ENST00000393408 GRM3Q14832 879 aa19.19■□□□□ 0.66
CBX1-202ENST00000393408 RBBP5Q15291 538 aaKnown RBP19.19■□□□□ 0.66
CBX1-202ENST00000393408 ANO4Q32M45 955 aa19.19■□□□□ 0.66
CBX1-202ENST00000393408 SNX32Q86XE0 403 aa19.19■□□□□ 0.66
CBX1-202ENST00000393408 PPP1R13LQ8WUF5 828 aa19.19■□□□□ 0.66
CBX1-202ENST00000393408 GPR22Q99680 433 aa19.19■□□□□ 0.66
CBX1-202ENST00000393408 IL22Q9GZX6 179 aa19.19■□□□□ 0.66
CBX1-202ENST00000393408 FBXW11Q9UKB1 542 aa19.19■□□□□ 0.66
CBX1-202ENST00000393408 SLC39A10Q9ULF5 831 aa19.19■□□□□ 0.66
CBX1-202ENST00000393408 PIN4Q9Y237 131 aaKnown RBP19.19■□□□□ 0.66
CBX1-202ENST00000393408 ANKRD6Q9Y2G4 727 aa19.19■□□□□ 0.66
CBX1-202ENST00000393408 RGSL1A5PLK6 1076 aa19.18■□□□□ 0.66
CBX1-202ENST00000393408 UNCXA6NJT0 531 aa19.18■□□□□ 0.66
CBX1-202ENST00000393408 TK2O00142 265 aa19.18■□□□□ 0.66
CBX1-202ENST00000393408 AIM2O14862 343 aa19.18■□□□□ 0.66
CBX1-202ENST00000393408 NMBRP28336 390 aa19.18■□□□□ 0.66
CBX1-202ENST00000393408 AXLP30530 894 aa19.18■□□□□ 0.66
CBX1-202ENST00000393408 GSTT1P30711 240 aa19.18■□□□□ 0.66
CBX1-202ENST00000393408 HADHAP40939 763 aa19.18■□□□□ 0.66
CBX1-202ENST00000393408 NUDT2P50583 147 aa19.18■□□□□ 0.66
CBX1-202ENST00000393408 RPL14P50914 215 aaKnown RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms