RNA–Protein interactions for RNA: ENST00000393387.5

PHF3-202, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF3, Length 6,947 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-202ENST00000393387 CST11Q9H112 138 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 BFARQ9NZS9 450 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 IP6K2Q9UHH9 426 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 PSME2Q9UL46 239 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 CBY1Q9Y3M2 126 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 ABCC12Q96J65 1359 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 SF3B1O75533 1304 aaKnown RBP eCLIP3.32□□□□□ -1.881e-6■■■■■ 75.5
PHF3-202ENST00000393387 TNKSO95271 1327 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 RPRD2Q5VT52 1461 aaKnown RBP3.32□□□□□ -1.88
PHF3-202ENST00000393387 C15orf38-AP3S2A0A0A6YYH1 394 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 CENPBD1B2RD01 187 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 DISC1C4P0D8 188 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 WRBO00258 174 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 SEC22BO75396 215 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 STAU1O95793 577 aaKnown RBP3.32□□□□□ -1.88
PHF3-202ENST00000393387 IFNA7P01567 189 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 SNRPAP09012 282 aaKnown RBP3.32□□□□□ -1.88
PHF3-202ENST00000393387 PLA2G4BP0C869 781 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 RASA1P20936 1047 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 RRM1P23921 792 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 PHKA2P46019 1235 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 RPL5P46777 297 aaKnown RBP3.32□□□□□ -1.88
PHF3-202ENST00000393387 POLD2P49005 469 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 NR1H2P55055 460 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 CDH11P55287 796 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 E2F2Q14209 437 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 FASTKQ14296 549 aaKnown RBP3.32□□□□□ -1.88
PHF3-202ENST00000393387 TATDN3Q17R31 274 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 VMACQ2NL98 169 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 HKDC1Q2TB90 917 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 LRRC37A5PQ49AS3 106 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 TPTE2Q6XPS3 522 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 ARPINQ7Z6K5 226 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 CUZD1Q86UP6 607 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 NLRP8Q86W28 1048 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 AMIGO1Q86WK6 493 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 DTX3Q8N9I9 347 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 KYQ8NBH2 561 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 OR6C4Q8NGE1 309 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 OR52K1Q8NGK4 314 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 TEX47Q8TBZ9 253 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 STARD8Q92502 1023 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 THRSPQ92748 146 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 VPS33AQ96AX1 596 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 MCEEQ96PE7 176 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 TSNAXQ99598 290 aaKnown RBP3.32□□□□□ -1.88
PHF3-202ENST00000393387 CHCHD6Q9BRQ6 235 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 ILKAPQ9H0C8 392 aaPredicted RBP3.32□□□□□ -1.88
PHF3-202ENST00000393387 WNT8AQ9H1J5 351 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 TIMMDC1Q9NPL8 285 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 CHST12Q9NRB3 414 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 HOXC10Q9NYD6 342 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 MAT2BQ9NZL9 334 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 CCDC167Q9P0B6 97 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 ZMYM5Q9UJ78 669 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 PLA2G4CQ9UP65 541 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 AP4E1Q9UPM8 1137 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 GSAPA4D1B5 854 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 OTOL1A6NHN0 477 aaPredicted RBP3.32□□□□□ -1.88
PHF3-202ENST00000393387 A8MVJ9 347 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 GPR89AB7ZAQ6 455 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 MLYCDO95822 493 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 SCGB1D1O95968 90 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 PGRP06401 933 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 C6orf222P0C671 652 aaPredicted RBP3.32□□□□□ -1.88
PHF3-202ENST00000393387 GPR89BP0CG08 455 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 TSHRP16473 764 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 GTF2E2P29084 291 aaKnown RBP3.32□□□□□ -1.88
PHF3-202ENST00000393387 RPL4P36578 427 aaKnown RBP3.32□□□□□ -1.88
PHF3-202ENST00000393387 ARL4DP49703 201 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 CCR4P51679 360 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 PURAQ00577 322 aaKnown RBP3.32□□□□□ -1.88
PHF3-202ENST00000393387 FSTL1Q12841 308 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 TRMT5Q32P41 509 aaKnown RBP3.32□□□□□ -1.88
PHF3-202ENST00000393387 PTRHD1Q6GMV3 140 aaKnown RBP3.32□□□□□ -1.88
PHF3-202ENST00000393387 TTC27Q6P3X3 843 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 RFWD3Q6PCD5 774 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 SPESP1Q6UW49 350 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 FAM220AQ7Z4H9 259 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 ZNF677Q86XU0 584 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 AMER2Q8N7J2 671 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 CHST4Q8NCG5 386 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 SSH3Q8TE77 659 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 PHF21BQ96EK2 531 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 LRCH3Q96II8 777 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 NSMCE2Q96MF7 247 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 C9orf16Q9BUW7 83 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 CEP41Q9BYV8 373 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 MAGEB5Q9BZ81 275 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 GAREM1Q9H706 876 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 FAM86C1Q9NVL1 165 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 TUBGCP4Q9UGJ1 667 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 KLF15Q9UIH9 416 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 RGS12O14924 1447 aa3.31□□□□□ -1.88
PHF3-202ENST00000393387 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.31□□□□□ -1.88
PHF3-202ENST00000393387 C13orf42A0A1B0GVH6 325 aa3.31□□□□□ -1.88
PHF3-202ENST00000393387 MDFIC2A0A1B0GVS7 189 aa3.31□□□□□ -1.88
PHF3-202ENST00000393387 GXYLT2A0PJZ3 443 aa3.31□□□□□ -1.88
PHF3-202ENST00000393387 OR6C6A6NF89 314 aa3.31□□□□□ -1.88
PHF3-202ENST00000393387 HMX3A6NHT5 357 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms