RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 UGT1A4P22310 534 aa16.66■□□□□ 0.26
PHTF1-205ENST00000393357 ALDH1B1P30837 517 aa16.66■□□□□ 0.26
PHTF1-205ENST00000393357 UGT1A3P35503 534 aa16.66■□□□□ 0.26
PHTF1-205ENST00000393357 UGT1A5P35504 534 aa16.66■□□□□ 0.26
PHTF1-205ENST00000393357 TMED10P49755 219 aaKnown RBP16.66■□□□□ 0.26
PHTF1-205ENST00000393357 C21orf59P57076 290 aa16.66■□□□□ 0.26
PHTF1-205ENST00000393357 IFRD2Q12894 506 aaPredicted RBP16.66■□□□□ 0.26
PHTF1-205ENST00000393357 CTBP1Q13363 440 aa16.66■□□□□ 0.26
PHTF1-205ENST00000393357 OTUD3Q5T2D3 398 aaPredicted RBP16.66■□□□□ 0.26
PHTF1-205ENST00000393357 VSIG10LQ86VR7 867 aa16.66■□□□□ 0.26
PHTF1-205ENST00000393357 SLC7A5P1Q8MH63 180 aa16.66■□□□□ 0.26
PHTF1-205ENST00000393357 CANT1Q8WVQ1 401 aa16.66■□□□□ 0.26
PHTF1-205ENST00000393357 HTR3CQ8WXA8 447 aa16.66■□□□□ 0.26
PHTF1-205ENST00000393357 AKT1S1Q96B36 256 aa16.66■□□□□ 0.26
PHTF1-205ENST00000393357 ZNF277Q9NRM2 450 aaPredicted RBP16.66■□□□□ 0.26
PHTF1-205ENST00000393357 SACM1LQ9NTJ5 587 aa16.66■□□□□ 0.26
PHTF1-205ENST00000393357 DNAJC28Q9NX36 388 aa16.66■□□□□ 0.26
PHTF1-205ENST00000393357 NPR1P16066 1061 aa16.66■□□□□ 0.26
PHTF1-205ENST00000393357 PSME3P61289 254 aa16.66■□□□□ 0.26
PHTF1-205ENST00000393357 PITX1P78337 314 aaPredicted RBP16.66■□□□□ 0.26
PHTF1-205ENST00000393357 IKBKEQ14164 716 aa16.66■□□□□ 0.26
PHTF1-205ENST00000393357 PIGGQ5H8A4 983 aa16.66■□□□□ 0.26
PHTF1-205ENST00000393357 NCCRP1Q6ZVX7 275 aaPredicted RBP16.66■□□□□ 0.26
PHTF1-205ENST00000393357 RYBPQ8N488 228 aaPredicted RBP16.66■□□□□ 0.26
PHTF1-205ENST00000393357 EMID1Q96A84 441 aaPredicted RBP16.66■□□□□ 0.26
PHTF1-205ENST00000393357 CERS2Q96G23 380 aa16.66■□□□□ 0.26
PHTF1-205ENST00000393357 CNDP1Q96KN2 507 aa16.66■□□□□ 0.26
PHTF1-205ENST00000393357 MPHOSPH6Q99547 160 aaKnown RBP16.66■□□□□ 0.26
PHTF1-205ENST00000393357 ACE2Q9BYF1 805 aaPredicted RBP16.66■□□□□ 0.26
PHTF1-205ENST00000393357 FBRSL1Q9HCM7 1045 aaKnown RBP16.66■□□□□ 0.26
PHTF1-205ENST00000393357 CHST12Q9NRB3 414 aa16.66■□□□□ 0.26
PHTF1-205ENST00000393357 TBC1D23Q9NUY8 699 aa16.66■□□□□ 0.26
PHTF1-205ENST00000393357 GGA3Q9NZ52 723 aa16.66■□□□□ 0.26
PHTF1-205ENST00000393357 SORCS3Q9UPU3 1222 aa16.66■□□□□ 0.26
PHTF1-205ENST00000393357 COPG1Q9Y678 874 aaKnown RBP16.66■□□□□ 0.26
PHTF1-205ENST00000393357 CITO14578 2027 aa16.66■□□□□ 0.26
PHTF1-205ENST00000393357 C2CD4BA6NLJ0 364 aa16.65■□□□□ 0.26
PHTF1-205ENST00000393357 STBD1O95210 358 aa16.65■□□□□ 0.26
PHTF1-205ENST00000393357 GARSP41250 739 aaKnown RBP16.65■□□□□ 0.26
PHTF1-205ENST00000393357 GPD2P43304 727 aa16.65■□□□□ 0.26
PHTF1-205ENST00000393357 HMGCS2P54868 508 aa16.65■□□□□ 0.26
PHTF1-205ENST00000393357 CAPRIN1Q14444 709 aaKnown RBP16.65■□□□□ 0.26
PHTF1-205ENST00000393357 FUT11Q495W5 492 aa16.65■□□□□ 0.26
PHTF1-205ENST00000393357 CYP4V2Q6ZWL3 525 aaPredicted RBP16.65■□□□□ 0.26
PHTF1-205ENST00000393357 WDR49Q8IV35 697 aa16.65■□□□□ 0.26
PHTF1-205ENST00000393357 C1orf127Q8N9H9 656 aa16.65■□□□□ 0.26
PHTF1-205ENST00000393357 ISOC1Q96CN7 298 aa16.65■□□□□ 0.26
PHTF1-205ENST00000393357 XYLT2Q9H1B5 865 aa16.65■□□□□ 0.26
PHTF1-205ENST00000393357 MRPL46Q9H2W6 279 aaKnown RBP16.65■□□□□ 0.26
PHTF1-205ENST00000393357 COQ6Q9Y2Z9 468 aa16.65■□□□□ 0.26
PHTF1-205ENST00000393357 ASNSP08243 561 aa16.65■□□□□ 0.26
PHTF1-205ENST00000393357 MAPK11Q15759 364 aa16.65■□□□□ 0.26
PHTF1-205ENST00000393357 CYP2A13Q16696 494 aa16.65■□□□□ 0.26
PHTF1-205ENST00000393357 TREML2Q5T2D2 321 aa16.65■□□□□ 0.26
PHTF1-205ENST00000393357 PPP1R26Q5T8A7 1209 aaPredicted RBP16.65■□□□□ 0.26
PHTF1-205ENST00000393357 JADE1Q6IE81 842 aa16.65■□□□□ 0.26
PHTF1-205ENST00000393357 NT5DC4Q86YG4 428 aa16.65■□□□□ 0.26
PHTF1-205ENST00000393357 BPIFB6Q8NFQ5 453 aa16.65■□□□□ 0.26
PHTF1-205ENST00000393357 URGCPQ8TCY9 931 aa16.65■□□□□ 0.26
PHTF1-205ENST00000393357 MRPL4Q9BYD3 311 aaKnown RBP16.65■□□□□ 0.26
PHTF1-205ENST00000393357 OSBPL6Q9BZF3 934 aa16.65■□□□□ 0.26
PHTF1-205ENST00000393357 ZNF518BQ9C0D4 1074 aa16.65■□□□□ 0.26
PHTF1-205ENST00000393357 RPF1Q9H9Y2 349 aaKnown RBP16.65■□□□□ 0.26
PHTF1-205ENST00000393357 DTLQ9NZJ0 730 aa16.65■□□□□ 0.26
PHTF1-205ENST00000393357 WARS2Q9UGM6 360 aaKnown RBP16.65■□□□□ 0.26
PHTF1-205ENST00000393357 PCDHB12Q9Y5F1 795 aa16.65■□□□□ 0.26
PHTF1-205ENST00000393357 POLBP06746 335 aa16.64■□□□□ 0.26
PHTF1-205ENST00000393357 PTPN7P35236 360 aa16.64■□□□□ 0.26
PHTF1-205ENST00000393357 RPL14P50914 215 aaKnown RBP16.64■□□□□ 0.26
PHTF1-205ENST00000393357 XIAPP98170 497 aa16.64■□□□□ 0.26
PHTF1-205ENST00000393357 CTU1Q7Z7A3 348 aaKnown RBP16.64■□□□□ 0.26
PHTF1-205ENST00000393357 SLC41A1Q8IVJ1 513 aa16.64■□□□□ 0.26
PHTF1-205ENST00000393357 CDKL3Q8IVW4 592 aaPredicted RBP16.64■□□□□ 0.26
PHTF1-205ENST00000393357 ZNF280CQ8ND82 737 aa16.64■□□□□ 0.26
PHTF1-205ENST00000393357 ADCY4Q8NFM4 1077 aa16.64■□□□□ 0.26
PHTF1-205ENST00000393357 SREK1Q8WXA9 508 aaKnown RBP16.64■□□□□ 0.26
PHTF1-205ENST00000393357 LRCH3Q96II8 777 aa16.64■□□□□ 0.26
PHTF1-205ENST00000393357 TRIM17Q9Y577 477 aa16.64■□□□□ 0.26
PHTF1-205ENST00000393357 HDAC3O15379 428 aa16.64■□□□□ 0.25
PHTF1-205ENST00000393357 MFSD11O43934 449 aa16.64■□□□□ 0.25
PHTF1-205ENST00000393357 ALOX15P16050 662 aaPredicted RBP16.64■□□□□ 0.25
PHTF1-205ENST00000393357 CHRM3P20309 590 aa16.64■□□□□ 0.25
PHTF1-205ENST00000393357 MAP4P27816 1152 aaKnown RBP16.64■□□□□ 0.25
PHTF1-205ENST00000393357 GP5P40197 560 aa16.64■□□□□ 0.25
PHTF1-205ENST00000393357 NAMPTP43490 491 aa16.64■□□□□ 0.25
PHTF1-205ENST00000393357 LSM3P62310 102 aaKnown RBP16.64■□□□□ 0.25
PHTF1-205ENST00000393357 EGFLAMQ63HQ2 1017 aa16.64■□□□□ 0.25
PHTF1-205ENST00000393357 ELMSAN1Q6PJG2 1045 aa16.64■□□□□ 0.25
PHTF1-205ENST00000393357 FAM35AQ86V20 835 aa16.64■□□□□ 0.25
PHTF1-205ENST00000393357 SPPL2CQ8IUH8 684 aa16.64■□□□□ 0.25
PHTF1-205ENST00000393357 PDZD8Q8NEN9 1154 aa16.64■□□□□ 0.25
PHTF1-205ENST00000393357 OR6B3Q8NGW1 331 aa16.64■□□□□ 0.25
PHTF1-205ENST00000393357 CXorf21Q9HAI6 301 aa16.64■□□□□ 0.25
PHTF1-205ENST00000393357 SLC38A10Q9HBR0 1119 aa16.64■□□□□ 0.25
PHTF1-205ENST00000393357 SPON1Q9HCB6 807 aa16.64■□□□□ 0.25
PHTF1-205ENST00000393357 MOCS1Q9NZB8 636 aa16.64■□□□□ 0.25
PHTF1-205ENST00000393357 USP21Q9UK80 565 aa16.64■□□□□ 0.25
PHTF1-205ENST00000393357 TRPC5Q9UL62 973 aaPredicted RBP16.64■□□□□ 0.25
PHTF1-205ENST00000393357 LACTBL1A8MY62 500 aa16.64■□□□□ 0.25
PHTF1-205ENST00000393357 FBP2O00757 339 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms