RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 ANAPC5Q9UJX4 755 aa13.91□□□□□ -0.18
PTN-202ENST00000393083 HPCAL4Q9UM19 191 aa13.91□□□□□ -0.18
PTN-202ENST00000393083 TICRRQ7Z2Z1 1910 aa13.9□□□□□ -0.18
PTN-202ENST00000393083 FAM86C2PA6NEL3 165 aa13.9□□□□□ -0.18
PTN-202ENST00000393083 E9PAM4 449 aa13.9□□□□□ -0.18
PTN-202ENST00000393083 NDC80O14777 642 aa13.9□□□□□ -0.18
PTN-202ENST00000393083 PPP1R12AO14974 1030 aaPredicted RBP13.9□□□□□ -0.18
PTN-202ENST00000393083 FGF10O15520 208 aaPredicted RBP13.9□□□□□ -0.18
PTN-202ENST00000393083 GPR37L1O60883 481 aa13.9□□□□□ -0.18
PTN-202ENST00000393083 GLULP15104 373 aa13.9□□□□□ -0.18
PTN-202ENST00000393083 HOXC13P31276 330 aa13.9□□□□□ -0.18
PTN-202ENST00000393083 SERPINB6P35237 376 aa13.9□□□□□ -0.18
PTN-202ENST00000393083 RPL22P35268 128 aaKnown RBP13.9□□□□□ -0.18
PTN-202ENST00000393083 SOX9P48436 509 aa13.9□□□□□ -0.18
PTN-202ENST00000393083 NRG1Q02297 640 aaPredicted RBP13.9□□□□□ -0.18
PTN-202ENST00000393083 RING1Q06587 406 aa13.9□□□□□ -0.18
PTN-202ENST00000393083 PDK1Q15118 436 aa13.9□□□□□ -0.18
PTN-202ENST00000393083 RHBDF2Q6PJF5 856 aa13.9□□□□□ -0.18
PTN-202ENST00000393083 NPWQ8N729 165 aa13.9□□□□□ -0.18
PTN-202ENST00000393083 TFB1MQ8WVM0 346 aaKnown RBP13.9□□□□□ -0.18
PTN-202ENST00000393083 RTP4Q96DX8 246 aa13.9□□□□□ -0.18
PTN-202ENST00000393083 BTN2A3PQ96KV6 586 aa13.9□□□□□ -0.18
PTN-202ENST00000393083 ACBD3Q9H3P7 528 aa13.9□□□□□ -0.18
PTN-202ENST00000393083 C8orf33Q9H7E9 229 aaPredicted RBP13.9□□□□□ -0.18
PTN-202ENST00000393083 CATSPERBQ9H7T0 1116 aa13.9□□□□□ -0.18
PTN-202ENST00000393083 VIPAS39Q9H9C1 493 aa13.9□□□□□ -0.18
PTN-202ENST00000393083 USP29Q9HBJ7 922 aa13.9□□□□□ -0.18
PTN-202ENST00000393083 LSM7Q9UK45 103 aaKnown RBP13.9□□□□□ -0.18
PTN-202ENST00000393083 RAD54BQ9Y620 910 aa13.9□□□□□ -0.18
PTN-202ENST00000393083 PIAS3Q9Y6X2 628 aa13.9□□□□□ -0.18
PTN-202ENST00000393083 TP73O15350 636 aa13.89□□□□□ -0.19
PTN-202ENST00000393083 CYP17A1P05093 508 aa13.89□□□□□ -0.19
PTN-202ENST00000393083 VAV1P15498 845 aa13.89□□□□□ -0.19
PTN-202ENST00000393083 CORO1AP31146 461 aaKnown RBP13.89□□□□□ -0.19
PTN-202ENST00000393083 CTHP32929 405 aa13.89□□□□□ -0.19
PTN-202ENST00000393083 ACTN2P35609 894 aa13.89□□□□□ -0.19
PTN-202ENST00000393083 NRLP54845 237 aa13.89□□□□□ -0.19
PTN-202ENST00000393083 DHX9Q08211 1270 aaKnown RBP13.89□□□□□ -0.19
PTN-202ENST00000393083 PRKD1Q15139 912 aaPredicted RBP13.89□□□□□ -0.19
PTN-202ENST00000393083 DHCR24Q15392 516 aa13.89□□□□□ -0.19
PTN-202ENST00000393083 GAB4Q2WGN9 574 aa13.89□□□□□ -0.19
PTN-202ENST00000393083 MS4A13Q5J8X5 152 aa13.89□□□□□ -0.19
PTN-202ENST00000393083 NUGGCQ68CJ6 796 aa13.89□□□□□ -0.19
PTN-202ENST00000393083 HEATR6Q6AI08 1181 aaKnown RBP13.89□□□□□ -0.19
PTN-202ENST00000393083 HIBCHQ6NVY1 386 aaPredicted RBP13.89□□□□□ -0.19
PTN-202ENST00000393083 TPRG1Q6ZUI0 275 aa13.89□□□□□ -0.19
PTN-202ENST00000393083 C14orf80Q86SX3 495 aa13.89□□□□□ -0.19
PTN-202ENST00000393083 ZNF687Q8N1G0 1237 aa13.89□□□□□ -0.19
PTN-202ENST00000393083 CPA6Q8N4T0 437 aa13.89□□□□□ -0.19
PTN-202ENST00000393083 SHDQ96IW2 340 aa13.89□□□□□ -0.19
PTN-202ENST00000393083 C1orf74Q96LT6 269 aa13.89□□□□□ -0.19
PTN-202ENST00000393083 C1QTNF1Q9BXJ1 281 aa13.89□□□□□ -0.19
PTN-202ENST00000393083 PAK5Q9P286 719 aa13.89□□□□□ -0.19
PTN-202ENST00000393083 AGO1Q9UL18 857 aaKnown RBP13.89□□□□□ -0.19
PTN-202ENST00000393083 TPX2Q9ULW0 747 aaKnown RBP13.89□□□□□ -0.19
PTN-202ENST00000393083 SPECC1L-ADORA2AF8WAN1 911 aa13.88□□□□□ -0.19
PTN-202ENST00000393083 PPFIA2O75334 1257 aa13.88□□□□□ -0.19
PTN-202ENST00000393083 NFATC1O95644 943 aa13.88□□□□□ -0.19
PTN-202ENST00000393083 CD72P21854 359 aa13.88□□□□□ -0.19
PTN-202ENST00000393083 GJA4P35212 333 aa13.88□□□□□ -0.19
PTN-202ENST00000393083 AP1B1Q10567 949 aa13.88□□□□□ -0.19
PTN-202ENST00000393083 MTA1Q13330 715 aa13.88□□□□□ -0.19
PTN-202ENST00000393083 RNASEH2BQ5TBB1 312 aaKnown RBP13.88□□□□□ -0.19
PTN-202ENST00000393083 RAP1GAP2Q684P5 730 aa13.88□□□□□ -0.19
PTN-202ENST00000393083 CWF19L1Q69YN2 538 aaKnown RBP13.88□□□□□ -0.19
PTN-202ENST00000393083 TXNDC11Q6PKC3 985 aa13.88□□□□□ -0.19
PTN-202ENST00000393083 PCGF5Q86SE9 256 aa13.88□□□□□ -0.19
PTN-202ENST00000393083 CCDC25Q86WR0 208 aa13.88□□□□□ -0.19
PTN-202ENST00000393083 RALGPS2Q86X27 583 aaPredicted RBP13.88□□□□□ -0.19
PTN-202ENST00000393083 DENND1CQ8IV53 801 aa13.88□□□□□ -0.19
PTN-202ENST00000393083 TP53INP2Q8IXH6 220 aa13.88□□□□□ -0.19
PTN-202ENST00000393083 FAM217AQ8IXS0 508 aa13.88□□□□□ -0.19
PTN-202ENST00000393083 TAB3Q8N5C8 712 aaPredicted RBP13.88□□□□□ -0.19
PTN-202ENST00000393083 PBXIP1Q96AQ6 731 aa13.88□□□□□ -0.19
PTN-202ENST00000393083 MSANTD3Q96H12 275 aa13.88□□□□□ -0.19
PTN-202ENST00000393083 TBC1D17Q9HA65 648 aa13.88□□□□□ -0.19
PTN-202ENST00000393083 STOML2Q9UJZ1 356 aa13.88□□□□□ -0.19
PTN-202ENST00000393083 VANGL2Q9ULK5 521 aa13.88□□□□□ -0.19
PTN-202ENST00000393083 SHOC2Q9UQ13 582 aa13.88□□□□□ -0.19
PTN-202ENST00000393083 ZNF510Q9Y2H8 683 aa13.88□□□□□ -0.19
PTN-202ENST00000393083 ATP8A1Q9Y2Q0 1164 aa13.88□□□□□ -0.19
PTN-202ENST00000393083 F5P12259 2224 aa13.88□□□□□ -0.19
PTN-202ENST00000393083 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.88□□□□□ -0.19
PTN-202ENST00000393083 KANSL1LA0AUZ9 987 aa13.88□□□□□ -0.19
PTN-202ENST00000393083 CHKAP35790 457 aa13.88□□□□□ -0.19
PTN-202ENST00000393083 HARS2P49590 506 aaKnown RBP13.88□□□□□ -0.19
PTN-202ENST00000393083 BASP1P80723 227 aaKnown RBP13.88□□□□□ -0.19
PTN-202ENST00000393083 AUHQ13825 339 aaKnown RBP13.88□□□□□ -0.19
PTN-202ENST00000393083 MORF4L2Q15014 288 aa13.88□□□□□ -0.19
PTN-202ENST00000393083 LY6G5CQ5SRR4 150 aa13.88□□□□□ -0.19
PTN-202ENST00000393083 ARTNQ5T4W7 220 aa13.88□□□□□ -0.19
PTN-202ENST00000393083 LRRC31Q6UY01 552 aa13.88□□□□□ -0.19
PTN-202ENST00000393083 CHSY1Q86X52 802 aa13.88□□□□□ -0.19
PTN-202ENST00000393083 TMEM25Q86YD3 366 aa13.88□□□□□ -0.19
PTN-202ENST00000393083 PPIL6Q8IXY8 311 aa13.88□□□□□ -0.19
PTN-202ENST00000393083 ZNF683Q8IZ20 524 aa13.88□□□□□ -0.19
PTN-202ENST00000393083 CCNYQ8ND76 341 aa13.88□□□□□ -0.19
PTN-202ENST00000393083 UBLCP1Q8WVY7 318 aaPredicted RBP13.88□□□□□ -0.19
PTN-202ENST00000393083 HTR3CQ8WXA8 447 aa13.88□□□□□ -0.19
PTN-202ENST00000393083 AZIN2Q96A70 460 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms