RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 ZNF284Q2VY69 593 aa3.65□□□□□ -1.83
TRAV40-201ENST00000390467 PLK5Q496M5 336 aa3.65□□□□□ -1.83
TRAV40-201ENST00000390467 GALNTL6Q49A17 601 aa3.65□□□□□ -1.83
TRAV40-201ENST00000390467 DNTTIP2Q5QJE6 756 aaKnown RBP3.65□□□□□ -1.83
TRAV40-201ENST00000390467 TTC22Q5TAA0 569 aa3.65□□□□□ -1.83
TRAV40-201ENST00000390467 FAM171A1Q5VUB5 890 aa3.65□□□□□ -1.83
TRAV40-201ENST00000390467 MTFR2Q6P444 385 aa3.65□□□□□ -1.83
TRAV40-201ENST00000390467 IGFN1Q86VF2 1251 aa3.65□□□□□ -1.83
TRAV40-201ENST00000390467 FAM186BQ8IYM0 893 aa3.65□□□□□ -1.83
TRAV40-201ENST00000390467 VPS52Q8N1B4 723 aa3.65□□□□□ -1.83
TRAV40-201ENST00000390467 DPP10Q8N608 796 aa3.65□□□□□ -1.83
TRAV40-201ENST00000390467 HORMAD2Q8N7B1 307 aa3.65□□□□□ -1.83
TRAV40-201ENST00000390467 NEXN-AS1Q8NBZ9 246 aa3.65□□□□□ -1.83
TRAV40-201ENST00000390467 SCAMP5Q8TAC9 235 aa3.65□□□□□ -1.83
TRAV40-201ENST00000390467 SLC2A12Q8TD20 617 aa3.65□□□□□ -1.83
TRAV40-201ENST00000390467 C2CD4CQ8TF44 421 aa3.65□□□□□ -1.83
TRAV40-201ENST00000390467 RSC1A1Q92681 617 aa3.65□□□□□ -1.83
TRAV40-201ENST00000390467 SEZ6LQ9BYH1 1024 aa3.65□□□□□ -1.83
TRAV40-201ENST00000390467 ABHD16BQ9H3Z7 469 aa3.65□□□□□ -1.83
TRAV40-201ENST00000390467 CATSPERBQ9H7T0 1116 aa3.65□□□□□ -1.83
TRAV40-201ENST00000390467 PDE11AQ9HCR9 933 aa3.65□□□□□ -1.83
TRAV40-201ENST00000390467 GEMIN8Q9NWZ8 242 aaKnown RBP3.65□□□□□ -1.83
TRAV40-201ENST00000390467 ZDHHC7Q9NXF8 308 aa3.65□□□□□ -1.83
TRAV40-201ENST00000390467 ZNF112Q9UJU3 913 aa3.65□□□□□ -1.83
TRAV40-201ENST00000390467 RAI2Q9Y5P3 530 aa3.65□□□□□ -1.83
TRAV40-201ENST00000390467 STMND1H3BQB6 276 aa3.64□□□□□ -1.83
TRAV40-201ENST00000390467 FFAR2O15552 330 aa3.64□□□□□ -1.83
TRAV40-201ENST00000390467 PRC1O43663 620 aa3.64□□□□□ -1.83
TRAV40-201ENST00000390467 LDB2O43679 373 aa3.64□□□□□ -1.83
TRAV40-201ENST00000390467 LIASO43766 372 aa3.64□□□□□ -1.83
TRAV40-201ENST00000390467 ACTL6BO94805 426 aa3.64□□□□□ -1.83
TRAV40-201ENST00000390467 PKMP14618 531 aaKnown RBP3.64□□□□□ -1.83
TRAV40-201ENST00000390467 HOXB9P17482 250 aaPredicted RBP3.64□□□□□ -1.83
TRAV40-201ENST00000390467 ITGB8P26012 769 aa3.64□□□□□ -1.83
TRAV40-201ENST00000390467 SERPINB3P29508 390 aa3.64□□□□□ -1.83
TRAV40-201ENST00000390467 HOXD3P31249 432 aaPredicted RBP3.64□□□□□ -1.83
TRAV40-201ENST00000390467 THPOP40225 353 aa3.64□□□□□ -1.83
TRAV40-201ENST00000390467 RRP1P56182 461 aaKnown RBP3.64□□□□□ -1.83
TRAV40-201ENST00000390467 PFKFB4Q16877 469 aa3.64□□□□□ -1.83
TRAV40-201ENST00000390467 HSP90AB2PQ58FF8 381 aa3.64□□□□□ -1.83
TRAV40-201ENST00000390467 VWA5B1Q5TIE3 1220 aa3.64□□□□□ -1.83
TRAV40-201ENST00000390467 OTUD1Q5VV17 481 aaPredicted RBP3.64□□□□□ -1.83
TRAV40-201ENST00000390467 NFRKBQ6P4R8 1299 aa3.64□□□□□ -1.83
TRAV40-201ENST00000390467 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.64□□□□□ -1.83
TRAV40-201ENST00000390467 ZNF367Q7RTV3 350 aa3.64□□□□□ -1.83
TRAV40-201ENST00000390467 NR2C2APQ86WQ0 139 aa3.64□□□□□ -1.83
TRAV40-201ENST00000390467 CAMK1DQ8IU85 385 aa3.64□□□□□ -1.83
TRAV40-201ENST00000390467 FAM185AQ8N0U4 392 aa3.64□□□□□ -1.83
TRAV40-201ENST00000390467 EID2BQ96D98 161 aa3.64□□□□□ -1.83
TRAV40-201ENST00000390467 SLITRK1Q96PX8 696 aa3.64□□□□□ -1.83
TRAV40-201ENST00000390467 PPP1R10Q96QC0 940 aaKnown RBP3.64□□□□□ -1.83
TRAV40-201ENST00000390467 RMI1Q9H9A7 625 aa3.64□□□□□ -1.83
TRAV40-201ENST00000390467 NLRC4Q9NPP4 1024 aa3.64□□□□□ -1.83
TRAV40-201ENST00000390467 PRDM8Q9NQV8 689 aa3.64□□□□□ -1.83
TRAV40-201ENST00000390467 RAP2CQ9Y3L5 183 aa3.64□□□□□ -1.83
TRAV40-201ENST00000390467 SLC4A4Q9Y6R1 1079 aa3.64□□□□□ -1.83
TRAV40-201ENST00000390467 A0A087WYN8 130 aa3.63□□□□□ -1.83
TRAV40-201ENST00000390467 MS4A18H0YCH9 400 aa3.63□□□□□ -1.83
TRAV40-201ENST00000390467 SYT5O00445 386 aa3.63□□□□□ -1.83
TRAV40-201ENST00000390467 GNLYP22749 145 aa3.63□□□□□ -1.83
TRAV40-201ENST00000390467 AVPR1AP37288 418 aa3.63□□□□□ -1.83
TRAV40-201ENST00000390467 CDK7P50613 346 aa3.63□□□□□ -1.83
TRAV40-201ENST00000390467 CLCN5P51795 746 aa3.63□□□□□ -1.83
TRAV40-201ENST00000390467 BTKQ06187 659 aa3.63□□□□□ -1.83
TRAV40-201ENST00000390467 HYAL1Q12794 435 aa3.63□□□□□ -1.83
TRAV40-201ENST00000390467 C5orf22Q49AR2 442 aa3.63□□□□□ -1.83
TRAV40-201ENST00000390467 GXYLT1Q4G148 440 aa3.63□□□□□ -1.83
TRAV40-201ENST00000390467 LRRC24Q50LG9 513 aa3.63□□□□□ -1.83
TRAV40-201ENST00000390467 PRSS57Q6UWY2 283 aa3.63□□□□□ -1.83
TRAV40-201ENST00000390467 RAB11FIP2Q7L804 512 aa3.63□□□□□ -1.83
TRAV40-201ENST00000390467 TRIM74Q86UV6 250 aa3.63□□□□□ -1.83
TRAV40-201ENST00000390467 TRIM73Q86UV7 250 aa3.63□□□□□ -1.83
TRAV40-201ENST00000390467 SLC44A2Q8IWA5 706 aaPredicted RBP3.63□□□□□ -1.83
TRAV40-201ENST00000390467 SCN4BQ8IWT1 228 aa3.63□□□□□ -1.83
TRAV40-201ENST00000390467 ZNF527Q8NB42 609 aa3.63□□□□□ -1.83
TRAV40-201ENST00000390467 BICD2Q8TD16 824 aa3.63□□□□□ -1.83
TRAV40-201ENST00000390467 KCNJ9Q92806 393 aa3.63□□□□□ -1.83
TRAV40-201ENST00000390467 ELAC2Q9BQ52 826 aaKnown RBP3.63□□□□□ -1.83
TRAV40-201ENST00000390467 ELAC1Q9H777 363 aaKnown RBP3.63□□□□□ -1.83
TRAV40-201ENST00000390467 ARFGAP3Q9NP61 516 aa3.63□□□□□ -1.83
TRAV40-201ENST00000390467 SLC25A13Q9UJS0 675 aa3.63□□□□□ -1.83
TRAV40-201ENST00000390467 DOCK7Q96N67 2140 aa3.62□□□□□ -1.83
TRAV40-201ENST00000390467 SCN5AQ14524 2016 aa3.62□□□□□ -1.83
TRAV40-201ENST00000390467 C17orf100A8MU93 164 aa3.62□□□□□ -1.83
TRAV40-201ENST00000390467 ACKR2O00590 384 aa3.62□□□□□ -1.83
TRAV40-201ENST00000390467 TMCC1O94876 653 aa3.62□□□□□ -1.83
TRAV40-201ENST00000390467 CLDN7O95471 211 aa3.62□□□□□ -1.83
TRAV40-201ENST00000390467 ITGA2BP08514 1039 aa3.62□□□□□ -1.83
TRAV40-201ENST00000390467 ZNF12P17014 697 aa3.62□□□□□ -1.83
TRAV40-201ENST00000390467 AVPR2P30518 371 aa3.62□□□□□ -1.83
TRAV40-201ENST00000390467 ART1P52961 327 aa3.62□□□□□ -1.83
TRAV40-201ENST00000390467 GAS1P54826 345 aa3.62□□□□□ -1.83
TRAV40-201ENST00000390467 KIF5AQ12840 1032 aa3.62□□□□□ -1.83
TRAV40-201ENST00000390467 TRAF3Q13114 568 aa3.62□□□□□ -1.83
TRAV40-201ENST00000390467 IZUMO4Q1ZYL8 232 aa3.62□□□□□ -1.83
TRAV40-201ENST00000390467 TBRG1Q3YBR2 411 aa3.62□□□□□ -1.83
TRAV40-201ENST00000390467 MAP9Q49MG5 647 aa3.62□□□□□ -1.83
TRAV40-201ENST00000390467 SYTL3Q4VX76 610 aa3.62□□□□□ -1.83
TRAV40-201ENST00000390467 ZNF628Q5EBL2 1059 aa3.62□□□□□ -1.83
TRAV40-201ENST00000390467 FSCBQ5H9T9 825 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms