RNA–Protein interactions for RNA: ENST00000383820.9

RPUSD3-201, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD3, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-201ENST00000383820 CDH4P55283 916 aa18.37■□□□□ 0.53
RPUSD3-201ENST00000383820 CENPCQ03188 943 aa18.37■□□□□ 0.53
RPUSD3-201ENST00000383820 CCDC15Q0P6D6 951 aa18.37■□□□□ 0.53
RPUSD3-201ENST00000383820 CNTN1Q12860 1018 aa18.37■□□□□ 0.53
RPUSD3-201ENST00000383820 TARDBPQ13148 414 aaKnown RBP eCLIP18.37■□□□□ 0.53
RPUSD3-201ENST00000383820 BECN1Q14457 450 aa18.37■□□□□ 0.53
RPUSD3-201ENST00000383820 HES3Q5TGS1 186 aa18.37■□□□□ 0.53
RPUSD3-201ENST00000383820 NEK5Q6P3R8 708 aa18.37■□□□□ 0.53
RPUSD3-201ENST00000383820 C11orf57Q6ZUT1 292 aaPredicted RBP18.37■□□□□ 0.53
RPUSD3-201ENST00000383820 SH2D3CQ8N5H7 860 aa18.37■□□□□ 0.53
RPUSD3-201ENST00000383820 OR52K2Q8NGK3 314 aa18.37■□□□□ 0.53
RPUSD3-201ENST00000383820 RFFLQ8WZ73 363 aa18.37■□□□□ 0.53
RPUSD3-201ENST00000383820 RRN3Q9NYV6 651 aa18.37■□□□□ 0.53
RPUSD3-201ENST00000383820 COX16Q9P0S2 106 aa18.37■□□□□ 0.53
RPUSD3-201ENST00000383820 VPS28Q9UK41 221 aa18.37■□□□□ 0.53
RPUSD3-201ENST00000383820 VANGL2Q9ULK5 521 aa18.37■□□□□ 0.53
RPUSD3-201ENST00000383820 HS3ST2Q9Y278 367 aa18.37■□□□□ 0.53
RPUSD3-201ENST00000383820 FARP1Q9Y4F1 1045 aaPredicted RBP18.37■□□□□ 0.53
RPUSD3-201ENST00000383820 HS3ST4Q9Y661 456 aa18.37■□□□□ 0.53
RPUSD3-201ENST00000383820 GTPBP10A4D1E9 387 aaKnown RBP18.36■□□□□ 0.53
RPUSD3-201ENST00000383820 DAB1O75553 588 aa18.36■□□□□ 0.53
RPUSD3-201ENST00000383820 MAT2AP31153 395 aaKnown RBP18.36■□□□□ 0.53
RPUSD3-201ENST00000383820 NOS2P35228 1153 aa18.36■□□□□ 0.53
RPUSD3-201ENST00000383820 USP8P40818 1118 aa18.36■□□□□ 0.53
RPUSD3-201ENST00000383820 NUMBP49757 651 aa18.36■□□□□ 0.53
RPUSD3-201ENST00000383820 ARHGAP44Q17R89 818 aa18.36■□□□□ 0.53
RPUSD3-201ENST00000383820 GJB7Q6PEY0 223 aa18.36■□□□□ 0.53
RPUSD3-201ENST00000383820 OLFML1Q6UWY5 402 aa18.36■□□□□ 0.53
RPUSD3-201ENST00000383820 GBP6Q6ZN66 633 aa18.36■□□□□ 0.53
RPUSD3-201ENST00000383820 Q6ZVU0 165 aa18.36■□□□□ 0.53
RPUSD3-201ENST00000383820 SLC26A9Q7LBE3 791 aa18.36■□□□□ 0.53
RPUSD3-201ENST00000383820 ZNF397Q8NF99 534 aaPredicted RBP18.36■□□□□ 0.53
RPUSD3-201ENST00000383820 CCDC114Q96M63 670 aa18.36■□□□□ 0.53
RPUSD3-201ENST00000383820 DCBLD2Q96PD2 775 aa18.36■□□□□ 0.53
RPUSD3-201ENST00000383820 BBC3Q96PG8 261 aaPredicted RBP18.36■□□□□ 0.53
RPUSD3-201ENST00000383820 CRACR2AQ9BSW2 395 aa18.36■□□□□ 0.53
RPUSD3-201ENST00000383820 TMEM51Q9NW97 253 aa18.36■□□□□ 0.53
RPUSD3-201ENST00000383820 EIF4E1BA6NMX2 242 aaKnown RBP18.35■□□□□ 0.53
RPUSD3-201ENST00000383820 PAGE1O75459 146 aa18.35■□□□□ 0.53
RPUSD3-201ENST00000383820 GRAP2O75791 330 aa18.35■□□□□ 0.53
RPUSD3-201ENST00000383820 SLC9A1P19634 815 aa18.35■□□□□ 0.53
RPUSD3-201ENST00000383820 ACP1P24666 158 aa18.35■□□□□ 0.53
RPUSD3-201ENST00000383820 EIF2S3P41091 472 aaKnown RBP18.35■□□□□ 0.53
RPUSD3-201ENST00000383820 KRT83P78385 493 aa18.35■□□□□ 0.53
RPUSD3-201ENST00000383820 PTK2Q05397 1052 aa18.35■□□□□ 0.53
RPUSD3-201ENST00000383820 NME3Q13232 169 aa18.35■□□□□ 0.53
RPUSD3-201ENST00000383820 PROX2Q3B8N5 592 aa18.35■□□□□ 0.53
RPUSD3-201ENST00000383820 OR6B2Q6IFH4 312 aa18.35■□□□□ 0.53
RPUSD3-201ENST00000383820 FAM183BPQ6ZVS7 135 aa18.35■□□□□ 0.53
RPUSD3-201ENST00000383820 ZDHHC17Q8IUH5 632 aa18.35■□□□□ 0.53
RPUSD3-201ENST00000383820 TMEM145Q8NBT3 493 aa18.35■□□□□ 0.53
RPUSD3-201ENST00000383820 KLHDC7BQ96G42 594 aa18.35■□□□□ 0.53
RPUSD3-201ENST00000383820 C2orf49Q9BVC5 232 aaPredicted RBP18.35■□□□□ 0.53
RPUSD3-201ENST00000383820 RWDD2AQ9UIY3 292 aa18.35■□□□□ 0.53
RPUSD3-201ENST00000383820 AK5Q9Y6K8 562 aa18.35■□□□□ 0.53
RPUSD3-201ENST00000383820 ARID1BQ8NFD5 2236 aaPredicted RBP18.35■□□□□ 0.53
RPUSD3-201ENST00000383820 MYLKQ15746 1914 aa18.34■□□□□ 0.53
RPUSD3-201ENST00000383820 M0QYT0 321 aa18.34■□□□□ 0.53
RPUSD3-201ENST00000383820 SRCP12931 536 aa18.34■□□□□ 0.53
RPUSD3-201ENST00000383820 IRAK1P51617 712 aa18.34■□□□□ 0.53
RPUSD3-201ENST00000383820 CLDN6P56747 220 aa18.34■□□□□ 0.53
RPUSD3-201ENST00000383820 TAS2R38P59533 333 aa18.34■□□□□ 0.53
RPUSD3-201ENST00000383820 E2F1Q01094 437 aa18.34■□□□□ 0.53
RPUSD3-201ENST00000383820 SLC6A3Q01959 620 aa18.34■□□□□ 0.53
RPUSD3-201ENST00000383820 ZNF211Q13398 564 aaPredicted RBP18.34■□□□□ 0.53
RPUSD3-201ENST00000383820 EXOC3L4Q17RC7 722 aa18.34■□□□□ 0.53
RPUSD3-201ENST00000383820 BRMS1LQ5PSV4 323 aa18.34■□□□□ 0.53
RPUSD3-201ENST00000383820 ACBD5Q5T8D3 534 aaPredicted RBP18.34■□□□□ 0.53
RPUSD3-201ENST00000383820 LRRC69Q6ZNQ3 347 aa18.34■□□□□ 0.53
RPUSD3-201ENST00000383820 PASD1Q8IV76 773 aa18.34■□□□□ 0.53
RPUSD3-201ENST00000383820 C1orf131Q8NDD1 294 aaKnown RBP18.34■□□□□ 0.53
RPUSD3-201ENST00000383820 TMIEQ8NEW7 156 aa18.34■□□□□ 0.53
RPUSD3-201ENST00000383820 SNIP1Q8TAD8 396 aaKnown RBP18.34■□□□□ 0.53
RPUSD3-201ENST00000383820 UBL7Q96S82 380 aaPredicted RBP18.34■□□□□ 0.53
RPUSD3-201ENST00000383820 MUC3BQ9H195 1237 aa18.34■□□□□ 0.53
RPUSD3-201ENST00000383820 RRP8O43159 456 aaKnown RBP18.33■□□□□ 0.52
RPUSD3-201ENST00000383820 TLX3O43711 291 aaPredicted RBP18.33■□□□□ 0.52
RPUSD3-201ENST00000383820 ERBB2P04626 1255 aa18.33■□□□□ 0.52
RPUSD3-201ENST00000383820 KRT9P35527 623 aa18.33■□□□□ 0.52
RPUSD3-201ENST00000383820 CLCN6P51797 869 aa18.33■□□□□ 0.52
RPUSD3-201ENST00000383820 SEMG2Q02383 582 aa18.33■□□□□ 0.52
RPUSD3-201ENST00000383820 POM121L1PQ3SYA9 428 aa18.33■□□□□ 0.52
RPUSD3-201ENST00000383820 PIP5KL1Q5T9C9 394 aa18.33■□□□□ 0.52
RPUSD3-201ENST00000383820 C14orf80Q86SX3 495 aa18.33■□□□□ 0.52
RPUSD3-201ENST00000383820 SETD3Q86TU7 594 aaPredicted RBP18.33■□□□□ 0.52
RPUSD3-201ENST00000383820 DCBLD1Q8N8Z6 715 aa18.33■□□□□ 0.52
RPUSD3-201ENST00000383820 OR2A12Q8NGT7 310 aa18.33■□□□□ 0.52
RPUSD3-201ENST00000383820 FAM174AQ8TBP5 190 aa18.33■□□□□ 0.52
RPUSD3-201ENST00000383820 BAP1Q92560 729 aa18.33■□□□□ 0.52
RPUSD3-201ENST00000383820 PGAP3Q96FM1 320 aaPredicted RBP18.33■□□□□ 0.52
RPUSD3-201ENST00000383820 CRELD1Q96HD1 420 aa18.33■□□□□ 0.52
RPUSD3-201ENST00000383820 NPY6RQ99463 290 aa18.33■□□□□ 0.52
RPUSD3-201ENST00000383820 SIK2Q9H0K1 926 aa18.33■□□□□ 0.52
RPUSD3-201ENST00000383820 WDCPQ9H6R7 721 aa18.33■□□□□ 0.52
RPUSD3-201ENST00000383820 KLHL11Q9NVR0 708 aa18.33■□□□□ 0.52
RPUSD3-201ENST00000383820 ARHGEF38Q9NXL2 777 aa18.33■□□□□ 0.52
RPUSD3-201ENST00000383820 CLCA2Q9UQC9 943 aa18.33■□□□□ 0.52
RPUSD3-201ENST00000383820 PAXBP1Q9Y5B6 917 aa18.33■□□□□ 0.52
RPUSD3-201ENST00000383820 DOCK9Q9BZ29 2069 aa18.33■□□□□ 0.52
RPUSD3-201ENST00000383820 CELSR3Q9NYQ7 3312 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms