RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 FSTL4Q6MZW2 842 aa16.59■□□□□ 0.25
NKX3-1-201ENST00000380871 STRA8Q7Z7C7 330 aa16.59■□□□□ 0.25
NKX3-1-201ENST00000380871 ADGRG6Q86SQ4 1221 aa16.59■□□□□ 0.25
NKX3-1-201ENST00000380871 MARK4Q96L34 752 aa16.59■□□□□ 0.25
NKX3-1-201ENST00000380871 SIKE1Q9BRV8 207 aa16.59■□□□□ 0.25
NKX3-1-201ENST00000380871 MYOCOSA0A1B0GUC4 107 aa16.59■□□□□ 0.25
NKX3-1-201ENST00000380871 SAT1P21673 171 aa16.59■□□□□ 0.25
NKX3-1-201ENST00000380871 GRK2P25098 689 aa16.59■□□□□ 0.25
NKX3-1-201ENST00000380871 MPSTP25325 297 aa16.59■□□□□ 0.25
NKX3-1-201ENST00000380871 TKTL1P51854 596 aa16.59■□□□□ 0.25
NKX3-1-201ENST00000380871 C4orf22Q6V702 233 aa16.59■□□□□ 0.25
NKX3-1-201ENST00000380871 SLC26A9Q7LBE3 791 aa16.59■□□□□ 0.25
NKX3-1-201ENST00000380871 UNC93AQ86WB7 457 aa16.59■□□□□ 0.25
NKX3-1-201ENST00000380871 ST13P4Q8IZP2 240 aaPredicted RBP16.59■□□□□ 0.25
NKX3-1-201ENST00000380871 MFSD3Q96ES6 412 aa16.59■□□□□ 0.25
NKX3-1-201ENST00000380871 ZDHHC7Q9NXF8 308 aa16.59■□□□□ 0.25
NKX3-1-201ENST00000380871 G3V2L1 256 aa16.58■□□□□ 0.25
NKX3-1-201ENST00000380871 POMCP01189 267 aa16.58■□□□□ 0.25
NKX3-1-201ENST00000380871 ALOX15P16050 662 aaPredicted RBP16.58■□□□□ 0.25
NKX3-1-201ENST00000380871 ZFXP17010 805 aaPredicted RBP16.58■□□□□ 0.25
NKX3-1-201ENST00000380871 PTPN1P18031 435 aaKnown RBP16.58■□□□□ 0.25
NKX3-1-201ENST00000380871 GP5P40197 560 aa16.58■□□□□ 0.25
NKX3-1-201ENST00000380871 NUDT2P50583 147 aa16.58■□□□□ 0.25
NKX3-1-201ENST00000380871 SNX16P57768 344 aa16.58■□□□□ 0.25
NKX3-1-201ENST00000380871 DEUP1Q05D60 604 aa16.58■□□□□ 0.25
NKX3-1-201ENST00000380871 GK3PQ14409 553 aa16.58■□□□□ 0.25
NKX3-1-201ENST00000380871 PDK3Q15120 406 aa16.58■□□□□ 0.25
NKX3-1-201ENST00000380871 EML3Q32P44 896 aa16.58■□□□□ 0.25
NKX3-1-201ENST00000380871 HSP90AA5PQ58FG0 334 aa16.58■□□□□ 0.25
NKX3-1-201ENST00000380871 GORASP1Q9BQQ3 440 aa16.58■□□□□ 0.25
NKX3-1-201ENST00000380871 STN1Q9H668 368 aaKnown RBP16.58■□□□□ 0.25
NKX3-1-201ENST00000380871 CDY2AQ9Y6F7 541 aa16.58■□□□□ 0.25
NKX3-1-201ENST00000380871 MYBPHLA2RUH7 354 aa16.58■□□□□ 0.24
NKX3-1-201ENST00000380871 PTGESO14684 152 aa16.58■□□□□ 0.24
NKX3-1-201ENST00000380871 NRP1O14786 923 aa16.58■□□□□ 0.24
NKX3-1-201ENST00000380871 EPHA3P29320 983 aa16.58■□□□□ 0.24
NKX3-1-201ENST00000380871 FDFT1P37268 417 aa16.58■□□□□ 0.24
NKX3-1-201ENST00000380871 SV2CQ496J9 727 aa16.58■□□□□ 0.24
NKX3-1-201ENST00000380871 CST9Q5W186 159 aa16.58■□□□□ 0.24
NKX3-1-201ENST00000380871 TMEM198Q66K66 360 aa16.58■□□□□ 0.24
NKX3-1-201ENST00000380871 CYS1Q717R9 158 aa16.58■□□□□ 0.24
NKX3-1-201ENST00000380871 TNIP3Q96KP6 325 aa16.58■□□□□ 0.24
NKX3-1-201ENST00000380871 ULBP1Q9BZM6 244 aa16.58■□□□□ 0.24
NKX3-1-201ENST00000380871 CDH19Q9H159 772 aa16.58■□□□□ 0.24
NKX3-1-201ENST00000380871 MIOSQ9NXC5 875 aa16.58■□□□□ 0.24
NKX3-1-201ENST00000380871 SSX2IPQ9Y2D8 614 aa16.58■□□□□ 0.24
NKX3-1-201ENST00000380871 PCDHB12Q9Y5F1 795 aa16.58■□□□□ 0.24
NKX3-1-201ENST00000380871 XPOTO43592 962 aaKnown RBP16.58■□□□□ 0.24
NKX3-1-201ENST00000380871 USP17L7P0C7H9 530 aa16.58■□□□□ 0.24
NKX3-1-201ENST00000380871 MLNP12872 115 aa16.58■□□□□ 0.24
NKX3-1-201ENST00000380871 SCNN1GP51170 649 aa16.58■□□□□ 0.24
NKX3-1-201ENST00000380871 MTTPP55157 894 aa16.58■□□□□ 0.24
NKX3-1-201ENST00000380871 TLR1Q15399 786 aa16.58■□□□□ 0.24
NKX3-1-201ENST00000380871 OTUD1Q5VV17 481 aaPredicted RBP16.58■□□□□ 0.24
NKX3-1-201ENST00000380871 EPGNQ6UW88 154 aa16.58■□□□□ 0.24
NKX3-1-201ENST00000380871 PID1Q7Z2X4 250 aa16.58■□□□□ 0.24
NKX3-1-201ENST00000380871 KBTBD6Q86V97 674 aa16.58■□□□□ 0.24
NKX3-1-201ENST00000380871 SENP8Q96LD8 212 aa16.58■□□□□ 0.24
NKX3-1-201ENST00000380871 UNKQ9C0B0 810 aaKnown RBP16.58■□□□□ 0.24
NKX3-1-201ENST00000380871 AK5Q9Y6K8 562 aa16.58■□□□□ 0.24
NKX3-1-201ENST00000380871 A0A096LPK6 155 aa16.57■□□□□ 0.24
NKX3-1-201ENST00000380871 TK2O00142 265 aa16.57■□□□□ 0.24
NKX3-1-201ENST00000380871 POLBP06746 335 aa16.57■□□□□ 0.24
NKX3-1-201ENST00000380871 SETSIPP0DME0 302 aa16.57■□□□□ 0.24
NKX3-1-201ENST00000380871 MX2P20592 715 aa16.57■□□□□ 0.24
NKX3-1-201ENST00000380871 CPT1AP50416 773 aa16.57■□□□□ 0.24
NKX3-1-201ENST00000380871 CLCNKBP51801 687 aa16.57■□□□□ 0.24
NKX3-1-201ENST00000380871 PKNOX1P55347 436 aa16.57■□□□□ 0.24
NKX3-1-201ENST00000380871 FOLH1Q04609 750 aa16.57■□□□□ 0.24
NKX3-1-201ENST00000380871 KIAA0319Q5VV43 1072 aa16.57■□□□□ 0.24
NKX3-1-201ENST00000380871 ALKAL1Q6UXT8 129 aa16.57■□□□□ 0.24
NKX3-1-201ENST00000380871 TDRD5Q8NAT2 981 aaKnown RBP16.57■□□□□ 0.24
NKX3-1-201ENST00000380871 RNF139Q8WU17 664 aa16.57■□□□□ 0.24
NKX3-1-201ENST00000380871 WNT8BQ93098 351 aa16.57■□□□□ 0.24
NKX3-1-201ENST00000380871 CENPKQ9BS16 269 aa16.57■□□□□ 0.24
NKX3-1-201ENST00000380871 CLIC5Q9NZA1 410 aa16.57■□□□□ 0.24
NKX3-1-201ENST00000380871 FZD10Q9ULW2 581 aa16.57■□□□□ 0.24
NKX3-1-201ENST00000380871 ST3GAL5Q9UNP4 418 aa16.57■□□□□ 0.24
NKX3-1-201ENST00000380871 TBC1D30Q9Y2I9 924 aa16.57■□□□□ 0.24
NKX3-1-201ENST00000380871 FAM72CH0Y354 149 aa16.57■□□□□ 0.24
NKX3-1-201ENST00000380871 M0QZ92 97 aa16.57■□□□□ 0.24
NKX3-1-201ENST00000380871 ATP9BO43861 1147 aa16.57■□□□□ 0.24
NKX3-1-201ENST00000380871 JUNP05412 331 aaKnown RBP16.57■□□□□ 0.24
NKX3-1-201ENST00000380871 TPH1P17752 444 aa16.57■□□□□ 0.24
NKX3-1-201ENST00000380871 CERCAMQ5T4B2 595 aa16.57■□□□□ 0.24
NKX3-1-201ENST00000380871 FAM72AQ5TYM5 149 aa16.57■□□□□ 0.24
NKX3-1-201ENST00000380871 FAM72DQ6L9T8 149 aa16.57■□□□□ 0.24
NKX3-1-201ENST00000380871 FAM72BQ86X60 149 aa16.57■□□□□ 0.24
NKX3-1-201ENST00000380871 SNX32Q86XE0 403 aa16.57■□□□□ 0.24
NKX3-1-201ENST00000380871 USP13Q92995 863 aaPredicted RBP16.57■□□□□ 0.24
NKX3-1-201ENST00000380871 TSPYL2Q9H2G4 693 aaPredicted RBP16.57■□□□□ 0.24
NKX3-1-201ENST00000380871 NMRK2Q9NPI5 230 aa16.57■□□□□ 0.24
NKX3-1-201ENST00000380871 ARHGAP26Q9UNA1 814 aa16.57■□□□□ 0.24
NKX3-1-201ENST00000380871 STX16-NPEPL1H3BU86 382 aa16.57■□□□□ 0.24
NKX3-1-201ENST00000380871 STAU1O95793 577 aaKnown RBP16.57■□□□□ 0.24
NKX3-1-201ENST00000380871 GLRBP48167 497 aa16.57■□□□□ 0.24
NKX3-1-201ENST00000380871 MRPS22P82650 360 aaKnown RBP16.57■□□□□ 0.24
NKX3-1-201ENST00000380871 ARHGAP17Q68EM7 881 aa16.57■□□□□ 0.24
NKX3-1-201ENST00000380871 CRYBG2Q8N1P7 616 aa16.57■□□□□ 0.24
NKX3-1-201ENST00000380871 RNF34Q969K3 372 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms