RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 GABRG3Q99928 467 aa9.5□□□□□ -0.89
HMGN1-202ENST00000380747 THAP2Q9H0W7 228 aa9.5□□□□□ -0.89
HMGN1-202ENST00000380747 MRPL47Q9HD33 250 aaKnown RBP9.5□□□□□ -0.89
HMGN1-202ENST00000380747 MPP6Q9NZW5 540 aa9.5□□□□□ -0.89
HMGN1-202ENST00000380747 INTS6Q9UL03 887 aaKnown RBP9.5□□□□□ -0.89
HMGN1-202ENST00000380747 INVSQ9Y283 1065 aa9.5□□□□□ -0.89
HMGN1-202ENST00000380747 FREM2Q5SZK8 3169 aa9.49□□□□□ -0.89
HMGN1-202ENST00000380747 ITPR1Q14643 2758 aa9.49□□□□□ -0.89
HMGN1-202ENST00000380747 CCDC163A0A0D9SF12 145 aa9.49□□□□□ -0.89
HMGN1-202ENST00000380747 DRGXA6NNA5 263 aa9.49□□□□□ -0.89
HMGN1-202ENST00000380747 DCLK1O15075 740 aa9.49□□□□□ -0.89
HMGN1-202ENST00000380747 AKR1B10O60218 316 aa9.49□□□□□ -0.89
HMGN1-202ENST00000380747 GDF9O60383 454 aa9.49□□□□□ -0.89
HMGN1-202ENST00000380747 RNF8O76064 485 aa9.49□□□□□ -0.89
HMGN1-202ENST00000380747 ASLP04424 464 aa9.49□□□□□ -0.89
HMGN1-202ENST00000380747 EPHX1P07099 455 aa9.49□□□□□ -0.89
HMGN1-202ENST00000380747 DLDP09622 509 aaKnown RBP9.49□□□□□ -0.89
HMGN1-202ENST00000380747 HLA-EP13747 358 aa9.49□□□□□ -0.89
HMGN1-202ENST00000380747 GABRG2P18507 467 aa9.49□□□□□ -0.89
HMGN1-202ENST00000380747 MZF1P28698 734 aaPredicted RBP9.49□□□□□ -0.89
HMGN1-202ENST00000380747 CTSOP43234 321 aaPredicted RBP9.49□□□□□ -0.89
HMGN1-202ENST00000380747 GALCP54803 685 aa9.49□□□□□ -0.89
HMGN1-202ENST00000380747 TBX2Q13207 712 aaPredicted RBP9.49□□□□□ -0.89
HMGN1-202ENST00000380747 SLC12A1Q13621 1099 aa9.49□□□□□ -0.89
HMGN1-202ENST00000380747 ARID5BQ14865 1188 aa9.49□□□□□ -0.89
HMGN1-202ENST00000380747 PLEKHG6Q3KR16 790 aa9.49□□□□□ -0.89
HMGN1-202ENST00000380747 C5orf22Q49AR2 442 aa9.49□□□□□ -0.89
HMGN1-202ENST00000380747 RNF219Q5W0B1 726 aaPredicted RBP9.49□□□□□ -0.89
HMGN1-202ENST00000380747 IL31Q6EBC2 164 aa9.49□□□□□ -0.89
HMGN1-202ENST00000380747 CXorf57Q6NSI4 855 aaKnown RBP9.49□□□□□ -0.89
HMGN1-202ENST00000380747 RWDD4Q6NW29 188 aaKnown RBP9.49□□□□□ -0.89
HMGN1-202ENST00000380747 KIAA1324Q6UXG2 1013 aaKnown RBP9.49□□□□□ -0.89
HMGN1-202ENST00000380747 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.49□□□□□ -0.89
HMGN1-202ENST00000380747 RASSF3Q86WH2 238 aa9.49□□□□□ -0.89
HMGN1-202ENST00000380747 CNGA4Q8IV77 575 aa9.49□□□□□ -0.89
HMGN1-202ENST00000380747 ZNF683Q8IZ20 524 aa9.49□□□□□ -0.89
HMGN1-202ENST00000380747 ZNF366Q8N895 744 aa9.49□□□□□ -0.89
HMGN1-202ENST00000380747 GAB3Q8WWW8 586 aa9.49□□□□□ -0.89
HMGN1-202ENST00000380747 NTAN1Q96AB6 310 aa9.49□□□□□ -0.89
HMGN1-202ENST00000380747 LOXL4Q96JB6 756 aa9.49□□□□□ -0.89
HMGN1-202ENST00000380747 CCDC42Q96M95 316 aa9.49□□□□□ -0.89
HMGN1-202ENST00000380747 PPP1R9BQ96SB3 815 aa9.49□□□□□ -0.89
HMGN1-202ENST00000380747 CHP1Q99653 195 aa9.49□□□□□ -0.89
HMGN1-202ENST00000380747 OCSTAMPQ9BR26 566 aa9.49□□□□□ -0.89
HMGN1-202ENST00000380747 ANP32EQ9BTT0 268 aa9.49□□□□□ -0.89
HMGN1-202ENST00000380747 MAGEB5Q9BZ81 275 aa9.49□□□□□ -0.89
HMGN1-202ENST00000380747 TRIM7Q9C029 511 aa9.49□□□□□ -0.89
HMGN1-202ENST00000380747 ZYG11BQ9C0D3 744 aa9.49□□□□□ -0.89
HMGN1-202ENST00000380747 MUC3BQ9H195 1237 aa9.49□□□□□ -0.89
HMGN1-202ENST00000380747 OSBPL2Q9H1P3 480 aa9.49□□□□□ -0.89
HMGN1-202ENST00000380747 SLC6A17Q9H1V8 727 aa9.49□□□□□ -0.89
HMGN1-202ENST00000380747 SPTLC3Q9NUV7 552 aa9.49□□□□□ -0.89
HMGN1-202ENST00000380747 OR12D3Q9UGF7 316 aa9.49□□□□□ -0.89
HMGN1-202ENST00000380747 EBF1Q9UH73 591 aa9.49□□□□□ -0.89
HMGN1-202ENST00000380747 ERVW-1Q9UQF0 538 aa9.49□□□□□ -0.89
HMGN1-202ENST00000380747 SSU72P8A0A1W2PR75 194 aa9.48□□□□□ -0.89
HMGN1-202ENST00000380747 FAM72CH0Y354 149 aa9.48□□□□□ -0.89
HMGN1-202ENST00000380747 PROS1P07225 676 aa9.48□□□□□ -0.89
HMGN1-202ENST00000380747 ZNF806P0C7X5 589 aa9.48□□□□□ -0.89
HMGN1-202ENST00000380747 OR1E1P30953 314 aa9.48□□□□□ -0.89
HMGN1-202ENST00000380747 ECT2LQ008S8 904 aa9.48□□□□□ -0.89
HMGN1-202ENST00000380747 ZNF252P-AS1Q0IIN9 211 aa9.48□□□□□ -0.89
HMGN1-202ENST00000380747 ENPP2Q13822 863 aa9.48□□□□□ -0.89
HMGN1-202ENST00000380747 SLC18A3Q16572 532 aa9.48□□□□□ -0.89
HMGN1-202ENST00000380747 USP39Q53GS9 565 aaKnown RBP9.48□□□□□ -0.89
HMGN1-202ENST00000380747 C6orf118Q5T5N4 469 aa9.48□□□□□ -0.89
HMGN1-202ENST00000380747 N4BP2L1Q5TBK1 243 aaPredicted RBP9.48□□□□□ -0.89
HMGN1-202ENST00000380747 FAM72AQ5TYM5 149 aa9.48□□□□□ -0.89
HMGN1-202ENST00000380747 FAM72DQ6L9T8 149 aa9.48□□□□□ -0.89
HMGN1-202ENST00000380747 FAM72BQ86X60 149 aa9.48□□□□□ -0.89
HMGN1-202ENST00000380747 CACUL1Q86Y37 369 aa9.48□□□□□ -0.89
HMGN1-202ENST00000380747 PYROXD2Q8N2H3 581 aa9.48□□□□□ -0.89
HMGN1-202ENST00000380747 OR52K2Q8NGK3 314 aa9.48□□□□□ -0.89
HMGN1-202ENST00000380747 RLN3Q8WXF3 142 aa9.48□□□□□ -0.89
HMGN1-202ENST00000380747 CTNNBL1Q8WYA6 563 aaPredicted RBP9.48□□□□□ -0.89
HMGN1-202ENST00000380747 TBC1D31Q96DN5 1066 aa9.48□□□□□ -0.89
HMGN1-202ENST00000380747 ARHGEF26Q96DR7 871 aa9.48□□□□□ -0.89
HMGN1-202ENST00000380747 MRFAP1L1Q96HT8 127 aa9.48□□□□□ -0.89
HMGN1-202ENST00000380747 MRGPRX3Q96LB0 322 aa9.48□□□□□ -0.89
HMGN1-202ENST00000380747 FEM1AQ9BSK4 669 aa9.48□□□□□ -0.89
HMGN1-202ENST00000380747 NUP85Q9BW27 656 aa9.48□□□□□ -0.89
HMGN1-202ENST00000380747 MTG2Q9H4K7 406 aa9.48□□□□□ -0.89
HMGN1-202ENST00000380747 NHEJ1Q9H9Q4 299 aaPredicted RBP9.48□□□□□ -0.89
HMGN1-202ENST00000380747 GPATCH2LQ9NWQ4 482 aa9.48□□□□□ -0.89
HMGN1-202ENST00000380747 PPARGC1AQ9UBK2 798 aaKnown RBP9.48□□□□□ -0.89
HMGN1-202ENST00000380747 SUN2Q9UH99 717 aa9.48□□□□□ -0.89
HMGN1-202ENST00000380747 PCSK1NQ9UHG2 260 aa9.48□□□□□ -0.89
HMGN1-202ENST00000380747 VPS28Q9UK41 221 aa9.48□□□□□ -0.89
HMGN1-202ENST00000380747 FZD10Q9ULW2 581 aa9.48□□□□□ -0.89
HMGN1-202ENST00000380747 TBC1D30Q9Y2I9 924 aa9.48□□□□□ -0.89
HMGN1-202ENST00000380747 GPSM3Q9Y4H4 160 aa9.48□□□□□ -0.89
HMGN1-202ENST00000380747 IGLV3-10A0A075B6K4 115 aa9.47□□□□□ -0.89
HMGN1-202ENST00000380747 TTC34A8MYJ7 566 aa9.47□□□□□ -0.89
HMGN1-202ENST00000380747 RNF223E7ERA6 249 aa9.47□□□□□ -0.89
HMGN1-202ENST00000380747 CREB3O43889 395 aa9.47□□□□□ -0.89
HMGN1-202ENST00000380747 PRPSAP2O60256 369 aa9.47□□□□□ -0.89
HMGN1-202ENST00000380747 LRIG2O94898 1065 aa9.47□□□□□ -0.89
HMGN1-202ENST00000380747 CYP1A2P05177 515 aa9.47□□□□□ -0.89
HMGN1-202ENST00000380747 SRPRAP08240 638 aaKnown RBP9.47□□□□□ -0.89
HMGN1-202ENST00000380747 H2AFZP0C0S5 128 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms