RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 ZNF112Q9UJU3 913 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 HBS1LQ9Y450 684 aaKnown RBP7.28□□□□□ -1.24
CCDC171-201ENST00000380701 ADGRB2O60241 1585 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 CCDC85CA6NKD9 419 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 TEX28O15482 410 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 RPSAP08865 295 aaKnown RBP7.28□□□□□ -1.24
CCDC171-201ENST00000380701 WEE1P30291 646 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 MAGEA10P43363 369 aaPredicted RBP7.28□□□□□ -1.24
CCDC171-201ENST00000380701 BLKP51451 505 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 RPP38P78345 283 aaKnown RBP7.28□□□□□ -1.24
CCDC171-201ENST00000380701 SMAD3P84022 425 aaKnown RBP7.28□□□□□ -1.24
CCDC171-201ENST00000380701 BEX3Q00994 111 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 IRF8Q02556 426 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 SLC29A2Q14542 456 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 LSM12Q3MHD2 195 aaKnown RBP7.28□□□□□ -1.24
CCDC171-201ENST00000380701 PHF13Q86YI8 300 aaPredicted RBP7.28□□□□□ -1.24
CCDC171-201ENST00000380701 GPSM1Q86YR5 675 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 DSELQ8IZU8 1212 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 C12orf42Q96LP6 360 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 MMADHCQ9H3L0 296 aaPredicted RBP7.28□□□□□ -1.24
CCDC171-201ENST00000380701 ZDHHC6Q9H6R6 413 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 POLE3Q9NRF9 147 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 ROBO3Q96MS0 1386 aa7.28□□□□□ -1.24
CCDC171-201ENST00000380701 HIST1H2ABP04908 130 aa7.27□□□□□ -1.24
CCDC171-201ENST00000380701 HNRNPH1P31943 449 aaKnown RBP7.27□□□□□ -1.24
CCDC171-201ENST00000380701 RAP1GAPP47736 663 aa7.27□□□□□ -1.24
CCDC171-201ENST00000380701 USP4Q13107 963 aa7.27□□□□□ -1.24
CCDC171-201ENST00000380701 TRIP10Q15642 601 aa7.27□□□□□ -1.24
CCDC171-201ENST00000380701 SEZ6Q53EL9 994 aa7.27□□□□□ -1.24
CCDC171-201ENST00000380701 CERS6Q6ZMG9 384 aa7.27□□□□□ -1.24
CCDC171-201ENST00000380701 HIST3H2AQ7L7L0 130 aa7.27□□□□□ -1.24
CCDC171-201ENST00000380701 RD3Q7Z3Z2 195 aa7.27□□□□□ -1.24
CCDC171-201ENST00000380701 SAMD14Q8IZD0 417 aaPredicted RBP7.27□□□□□ -1.24
CCDC171-201ENST00000380701 C7orf57Q8NEG2 295 aa7.27□□□□□ -1.24
CCDC171-201ENST00000380701 METTL6Q8TCB7 284 aa7.27□□□□□ -1.24
CCDC171-201ENST00000380701 ZNF473Q8WTR7 871 aaKnown RBP7.27□□□□□ -1.24
CCDC171-201ENST00000380701 HIST1H2ACQ93077 130 aa7.27□□□□□ -1.24
CCDC171-201ENST00000380701 KAZALD1Q96I82 304 aa7.27□□□□□ -1.24
CCDC171-201ENST00000380701 BDH2Q9BUT1 245 aa7.27□□□□□ -1.24
CCDC171-201ENST00000380701 BBS2Q9BXC9 721 aa7.27□□□□□ -1.24
CCDC171-201ENST00000380701 ROGDIQ9GZN7 287 aa7.27□□□□□ -1.24
CCDC171-201ENST00000380701 TBC1D23Q9NUY8 699 aa7.27□□□□□ -1.24
CCDC171-201ENST00000380701 ARL15Q9NXU5 204 aa7.27□□□□□ -1.24
CCDC171-201ENST00000380701 TAGLN3Q9UI15 199 aa7.27□□□□□ -1.24
CCDC171-201ENST00000380701 E9PBE3 544 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 ATG13O75143 517 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 ITGA2P17301 1181 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 ATP4AP20648 1035 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 PAICSP22234 425 aaKnown RBP7.27□□□□□ -1.25
CCDC171-201ENST00000380701 S100A3P33764 101 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 CDH8P55286 799 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 ACTN3Q08043 901 aaPredicted RBP7.27□□□□□ -1.25
CCDC171-201ENST00000380701 TPGS2Q68CL5 300 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 LONP2Q86WA8 852 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 RBFAQ8N0V3 343 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 BTN2A3PQ96KV6 586 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 PNMA5Q96PV4 448 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 FAM111AQ96PZ2 611 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 ABCG4Q9H172 646 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 PCDHB1Q9Y5F3 818 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 KCNE2Q9Y6J6 123 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 CCT8L1PA6NM43 557 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 SLC28A1O00337 649 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 TSPAN3O60637 253 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 LGR5O75473 907 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 ADRA1DP25100 572 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 PMS1P54277 932 aaKnown RBP7.27□□□□□ -1.25
CCDC171-201ENST00000380701 BTKQ06187 659 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 BIKQ13323 160 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 PGS1Q32NB8 556 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 WSCD1Q658N2 575 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 ZNF470Q6ECI4 717 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 ZFP1Q6P2D0 407 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 CASP12Q6UXS9 341 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 TSHZ1Q6ZSZ6 1077 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 PTAR1Q7Z6K3 402 aaPredicted RBP7.27□□□□□ -1.25
CCDC171-201ENST00000380701 TDRD5Q8NAT2 981 aaKnown RBP7.27□□□□□ -1.25
CCDC171-201ENST00000380701 CYGBQ8WWM9 190 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 FEM1CQ96JP0 617 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 ACOX2Q99424 681 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 APOL4Q9BPW4 351 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 CNPPD1Q9BV87 410 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 MRPS26Q9BYN8 205 aaKnown RBP7.27□□□□□ -1.25
CCDC171-201ENST00000380701 EPB41L4BQ9H329 900 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 RIBC2Q9H4K1 309 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 SMURF2Q9HAU4 748 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 THAP1Q9NVV9 213 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 GPATCH2LQ9NWQ4 482 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 EFR3BQ9Y2G0 817 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 BTNL10A8MVZ5 291 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 ECDO95905 644 aaPredicted RBP7.27□□□□□ -1.25
CCDC171-201ENST00000380701 PTPN2P17706 415 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 LPOP22079 712 aaPredicted RBP7.27□□□□□ -1.25
CCDC171-201ENST00000380701 ACAT1P24752 427 aaKnown RBP7.27□□□□□ -1.25
CCDC171-201ENST00000380701 NUDT2P50583 147 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 SLC16A1P53985 500 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 DGKZQ13574 1117 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 ATP13A5Q4VNC0 1218 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 SGF29Q96ES7 293 aa7.27□□□□□ -1.25
CCDC171-201ENST00000380701 NSMCE2Q96MF7 247 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms