RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 HECTD3Q5T447 861 aa20.25■□□□□ 0.83
PDLIM5-205ENST00000380180 CES3Q6UWW8 571 aa20.25■□□□□ 0.83
PDLIM5-205ENST00000380180 KLHDC8BQ8IXV7 354 aa20.25■□□□□ 0.83
PDLIM5-205ENST00000380180 BANPQ8N9N5 519 aa20.25■□□□□ 0.83
PDLIM5-205ENST00000380180 ALKBH8Q96BT7 664 aaKnown RBP20.25■□□□□ 0.83
PDLIM5-205ENST00000380180 HMCESQ96FZ2 354 aa20.25■□□□□ 0.83
PDLIM5-205ENST00000380180 MAGEB18Q96M61 343 aa20.25■□□□□ 0.83
PDLIM5-205ENST00000380180 ZNF212Q9UDV6 495 aa20.25■□□□□ 0.83
PDLIM5-205ENST00000380180 AAR2Q9Y312 384 aaKnown RBP20.25■□□□□ 0.83
PDLIM5-205ENST00000380180 TRIM49D1C9J1S8 452 aa20.24■□□□□ 0.83
PDLIM5-205ENST00000380180 COCHO43405 550 aa20.24■□□□□ 0.83
PDLIM5-205ENST00000380180 KRT37O76014 449 aa20.24■□□□□ 0.83
PDLIM5-205ENST00000380180 MT-CYBP00156 380 aaPredicted RBP20.24■□□□□ 0.83
PDLIM5-205ENST00000380180 HLA-DQB2P05538 268 aa20.24■□□□□ 0.83
PDLIM5-205ENST00000380180 SNRPAP09012 282 aaKnown RBP20.24■□□□□ 0.83
PDLIM5-205ENST00000380180 HSPA8P11142 646 aaKnown RBP20.24■□□□□ 0.83
PDLIM5-205ENST00000380180 TACR2P21452 398 aa20.24■□□□□ 0.83
PDLIM5-205ENST00000380180 TAF12Q16514 161 aa20.24■□□□□ 0.83
PDLIM5-205ENST00000380180 CERCAMQ5T4B2 595 aa20.24■□□□□ 0.83
PDLIM5-205ENST00000380180 LGSNQ5TDP6 509 aa20.24■□□□□ 0.83
PDLIM5-205ENST00000380180 NAPEPLDQ6IQ20 393 aa20.24■□□□□ 0.83
PDLIM5-205ENST00000380180 SH2D5Q6ZV89 423 aa20.24■□□□□ 0.83
PDLIM5-205ENST00000380180 CIR1Q86X95 450 aaPredicted RBP20.24■□□□□ 0.83
PDLIM5-205ENST00000380180 SEC16BQ96JE7 1060 aa20.24■□□□□ 0.83
PDLIM5-205ENST00000380180 TRPM5Q9NZQ8 1165 aa20.24■□□□□ 0.83
PDLIM5-205ENST00000380180 RPS6KL1Q9Y6S9 549 aa20.24■□□□□ 0.83
PDLIM5-205ENST00000380180 MYLKQ15746 1914 aa20.24■□□□□ 0.83
PDLIM5-205ENST00000380180 OBSL1O75147 1896 aa20.24■□□□□ 0.83
PDLIM5-205ENST00000380180 BAIAP3O94812 1187 aa20.24■□□□□ 0.83
PDLIM5-205ENST00000380180 NPY2RP49146 381 aa20.24■□□□□ 0.83
PDLIM5-205ENST00000380180 MTA1Q13330 715 aa20.24■□□□□ 0.83
PDLIM5-205ENST00000380180 ANO4Q32M45 955 aa20.24■□□□□ 0.83
PDLIM5-205ENST00000380180 GKAP1Q5VSY0 366 aaPredicted RBP20.24■□□□□ 0.83
PDLIM5-205ENST00000380180 J3KR12 359 aa20.23■□□□□ 0.83
PDLIM5-205ENST00000380180 PRRG1O14668 218 aa20.23■□□□□ 0.83
PDLIM5-205ENST00000380180 ANXA9O76027 345 aa20.23■□□□□ 0.83
PDLIM5-205ENST00000380180 ZWINTO95229 277 aa20.23■□□□□ 0.83
PDLIM5-205ENST00000380180 PEX11BO96011 259 aa20.23■□□□□ 0.83
PDLIM5-205ENST00000380180 PYGBP11216 843 aa20.23■□□□□ 0.83
PDLIM5-205ENST00000380180 TPH1P17752 444 aa20.23■□□□□ 0.83
PDLIM5-205ENST00000380180 NIPAL4Q0D2K0 466 aa20.23■□□□□ 0.83
PDLIM5-205ENST00000380180 PLD1Q13393 1074 aa20.23■□□□□ 0.83
PDLIM5-205ENST00000380180 KLHDC10Q6PID8 442 aa20.23■□□□□ 0.83
PDLIM5-205ENST00000380180 LINC00523Q86TU6 105 aa20.23■□□□□ 0.83
PDLIM5-205ENST00000380180 TCP10LQ8TDR4 215 aa20.23■□□□□ 0.83
PDLIM5-205ENST00000380180 FCRL3Q96P31 734 aaPredicted RBP20.23■□□□□ 0.83
PDLIM5-205ENST00000380180 TGS1Q96RS0 853 aaKnown RBP20.23■□□□□ 0.83
PDLIM5-205ENST00000380180 MRPL17Q9NRX2 175 aaKnown RBP20.23■□□□□ 0.83
PDLIM5-205ENST00000380180 GRID1Q9ULK0 1009 aa20.23■□□□□ 0.83
PDLIM5-205ENST00000380180 DENND4CQ5VZ89 1909 aa20.23■□□□□ 0.83
PDLIM5-205ENST00000380180 PLXNA4Q9HCM2 1894 aa20.23■□□□□ 0.83
PDLIM5-205ENST00000380180 ATP9BO43861 1147 aa20.22■□□□□ 0.83
PDLIM5-205ENST00000380180 ACSL4O60488 711 aa20.22■□□□□ 0.83
PDLIM5-205ENST00000380180 NEBLO76041 1014 aa20.22■□□□□ 0.83
PDLIM5-205ENST00000380180 FOXN2P32314 431 aa20.22■□□□□ 0.83
PDLIM5-205ENST00000380180 SLC18A2Q05940 514 aa20.22■□□□□ 0.83
PDLIM5-205ENST00000380180 TWF1Q12792 350 aa20.22■□□□□ 0.83
PDLIM5-205ENST00000380180 CDH17Q12864 832 aa20.22■□□□□ 0.83
PDLIM5-205ENST00000380180 HNRNPDQ14103 355 aaKnown RBP20.22■□□□□ 0.83
PDLIM5-205ENST00000380180 SPANXN3Q5MJ09 141 aa20.22■□□□□ 0.83
PDLIM5-205ENST00000380180 C16orf59Q7L2K0 433 aa20.22■□□□□ 0.83
PDLIM5-205ENST00000380180 TMEM135Q86UB9 458 aa20.22■□□□□ 0.83
PDLIM5-205ENST00000380180 LGI2Q8N0V4 545 aa20.22■□□□□ 0.83
PDLIM5-205ENST00000380180 DNAJC5GQ8N7S2 189 aa20.22■□□□□ 0.83
PDLIM5-205ENST00000380180 TRMT2BQ96GJ1 504 aaKnown RBP20.22■□□□□ 0.83
PDLIM5-205ENST00000380180 IL23AQ9NPF7 189 aa20.22■□□□□ 0.83
PDLIM5-205ENST00000380180 IL1RAPL1Q9NZN1 696 aa20.22■□□□□ 0.83
PDLIM5-205ENST00000380180 HMX2A2RU54 273 aa20.22■□□□□ 0.83
PDLIM5-205ENST00000380180 CARNS1A5YM72 827 aa20.22■□□□□ 0.83
PDLIM5-205ENST00000380180 KRT38O76015 456 aa20.22■□□□□ 0.83
PDLIM5-205ENST00000380180 OR1E1P30953 314 aa20.22■□□□□ 0.83
PDLIM5-205ENST00000380180 SLC6A4P31645 630 aa20.22■□□□□ 0.83
PDLIM5-205ENST00000380180 ELF1P32519 619 aa20.22■□□□□ 0.83
PDLIM5-205ENST00000380180 HARS2P49590 506 aaKnown RBP20.22■□□□□ 0.83
PDLIM5-205ENST00000380180 LBX1P52954 281 aa20.22■□□□□ 0.83
PDLIM5-205ENST00000380180 BMPR2Q13873 1038 aa20.22■□□□□ 0.83
PDLIM5-205ENST00000380180 VEPH1Q14D04 833 aa20.22■□□□□ 0.83
PDLIM5-205ENST00000380180 POLD3Q15054 466 aaPredicted RBP20.22■□□□□ 0.83
PDLIM5-205ENST00000380180 RFWD3Q6PCD5 774 aa20.22■□□□□ 0.83
PDLIM5-205ENST00000380180 LVRNQ6Q4G3 990 aa20.22■□□□□ 0.83
PDLIM5-205ENST00000380180 MARK2Q7KZI7 788 aaKnown RBP20.22■□□□□ 0.83
PDLIM5-205ENST00000380180 PIGWQ7Z7B1 504 aa20.22■□□□□ 0.83
PDLIM5-205ENST00000380180 ZNF354CQ86Y25 554 aa20.22■□□□□ 0.83
PDLIM5-205ENST00000380180 CFAP52Q8N1V2 620 aa20.22■□□□□ 0.83
PDLIM5-205ENST00000380180 CDKL2Q92772 493 aa20.22■□□□□ 0.83
PDLIM5-205ENST00000380180 PSMG2Q969U7 264 aa20.22■□□□□ 0.83
PDLIM5-205ENST00000380180 RNF38Q9H0F5 515 aa20.22■□□□□ 0.83
PDLIM5-205ENST00000380180 SLC17A6Q9P2U8 582 aa20.22■□□□□ 0.83
PDLIM5-205ENST00000380180 F5H5T6 163 aa20.21■□□□□ 0.83
PDLIM5-205ENST00000380180 AP3B1O00203 1094 aa20.21■□□□□ 0.83
PDLIM5-205ENST00000380180 LPXNO60711 386 aa20.21■□□□□ 0.83
PDLIM5-205ENST00000380180 RENBPP51606 427 aa20.21■□□□□ 0.83
PDLIM5-205ENST00000380180 FAM133BQ5BKY9 247 aaKnown RBP20.21■□□□□ 0.83
PDLIM5-205ENST00000380180 HHATQ5VTY9 493 aa20.21■□□□□ 0.83
PDLIM5-205ENST00000380180 DNAJB7Q7Z6W7 309 aaPredicted RBP20.21■□□□□ 0.83
PDLIM5-205ENST00000380180 IPMKQ8NFU5 416 aa20.21■□□□□ 0.83
PDLIM5-205ENST00000380180 ZNF669Q96BR6 464 aaPredicted RBP20.21■□□□□ 0.83
PDLIM5-205ENST00000380180 CERS2Q96G23 380 aa20.21■□□□□ 0.83
PDLIM5-205ENST00000380180 TBL1YQ9BQ87 522 aa20.21■□□□□ 0.83
PDLIM5-205ENST00000380180 IL22Q9GZX6 179 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms