RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 NT5DC3Q86UY8 548 aa12.2□□□□□ -0.46
PCNA-201ENST00000379143 KATNAL2Q8IYT4 538 aa12.2□□□□□ -0.46
PCNA-201ENST00000379143 CCDC33Q8N5R6 958 aa12.2□□□□□ -0.46
PCNA-201ENST00000379143 CAMKK1Q8N5S9 505 aa12.2□□□□□ -0.46
PCNA-201ENST00000379143 UBL4BQ8N7F7 174 aa12.2□□□□□ -0.46
PCNA-201ENST00000379143 CYB5D2Q8WUJ1 264 aa12.2□□□□□ -0.46
PCNA-201ENST00000379143 ATRIPQ8WXE1 791 aa12.2□□□□□ -0.46
PCNA-201ENST00000379143 SORCS1Q8WY21 1168 aa12.2□□□□□ -0.46
PCNA-201ENST00000379143 FAF2Q96CS3 445 aa12.2□□□□□ -0.46
PCNA-201ENST00000379143 RBM41Q96IZ5 413 aaKnown RBP12.2□□□□□ -0.46
PCNA-201ENST00000379143 ZNF830Q96NB3 372 aaPredicted RBP12.2□□□□□ -0.46
PCNA-201ENST00000379143 GABRG3Q99928 467 aa12.2□□□□□ -0.46
PCNA-201ENST00000379143 SPON2Q9BUD6 331 aa12.2□□□□□ -0.46
PCNA-201ENST00000379143 MAK16Q9BXY0 300 aaKnown RBP12.2□□□□□ -0.46
PCNA-201ENST00000379143 ACE2Q9BYF1 805 aaPredicted RBP12.2□□□□□ -0.46
PCNA-201ENST00000379143 TMEM245Q9H330 911 aa12.2□□□□□ -0.46
PCNA-201ENST00000379143 GOLPH3Q9H4A6 298 aa12.2□□□□□ -0.46
PCNA-201ENST00000379143 POLMQ9NP87 494 aaPredicted RBP12.2□□□□□ -0.46
PCNA-201ENST00000379143 SUN2Q9UH99 717 aa12.2□□□□□ -0.46
PCNA-201ENST00000379143 FBXO4Q9UKT5 387 aa12.2□□□□□ -0.46
PCNA-201ENST00000379143 HCN2Q9UL51 889 aa12.2□□□□□ -0.46
PCNA-201ENST00000379143 ERVW-1Q9UQF0 538 aa12.2□□□□□ -0.46
PCNA-201ENST00000379143 PCDHA3Q9Y5H8 950 aa12.2□□□□□ -0.46
PCNA-201ENST00000379143 ARHGAP42A6NI28 874 aa12.19□□□□□ -0.46
PCNA-201ENST00000379143 SGK1O00141 431 aa12.19□□□□□ -0.46
PCNA-201ENST00000379143 CBX4O00257 560 aa12.19□□□□□ -0.46
PCNA-201ENST00000379143 ZBTB24O43167 697 aaPredicted RBP12.19□□□□□ -0.46
PCNA-201ENST00000379143 GALR2O43603 387 aaPredicted RBP12.19□□□□□ -0.46
PCNA-201ENST00000379143 SYNCRIPO60506 623 aaKnown RBP12.19□□□□□ -0.46
PCNA-201ENST00000379143 CD48P09326 243 aa12.19□□□□□ -0.46
PCNA-201ENST00000379143 ZFXP17010 805 aaPredicted RBP12.19□□□□□ -0.46
PCNA-201ENST00000379143 AMPD1P23109 780 aa12.19□□□□□ -0.46
PCNA-201ENST00000379143 CTNNA2P26232 953 aa12.19□□□□□ -0.46
PCNA-201ENST00000379143 CETN2P41208 172 aa12.19□□□□□ -0.46
PCNA-201ENST00000379143 IL12RB1P42701 662 aa12.19□□□□□ -0.46
PCNA-201ENST00000379143 CLCN6P51797 869 aa12.19□□□□□ -0.46
PCNA-201ENST00000379143 STARD3Q14849 445 aa12.19□□□□□ -0.46
PCNA-201ENST00000379143 PKN3Q6P5Z2 889 aa12.19□□□□□ -0.46
PCNA-201ENST00000379143 RCOR2Q8IZ40 523 aa12.19□□□□□ -0.46
PCNA-201ENST00000379143 TRIM58Q8NG06 486 aa12.19□□□□□ -0.46
PCNA-201ENST00000379143 OR7D4Q8NG98 312 aa12.19□□□□□ -0.46
PCNA-201ENST00000379143 EXD1Q8NHP7 514 aa12.19□□□□□ -0.46
PCNA-201ENST00000379143 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.19□□□□□ -0.46
PCNA-201ENST00000379143 RAPGEF5Q92565 580 aa12.19□□□□□ -0.46
PCNA-201ENST00000379143 MRGPRX3Q96LB0 322 aa12.19□□□□□ -0.46
PCNA-201ENST00000379143 RNF157Q96PX1 679 aa12.19□□□□□ -0.46
PCNA-201ENST00000379143 ACOX2Q99424 681 aa12.19□□□□□ -0.46
PCNA-201ENST00000379143 PSMB7Q99436 277 aa12.19□□□□□ -0.46
PCNA-201ENST00000379143 LRRC19Q9H756 370 aa12.19□□□□□ -0.46
PCNA-201ENST00000379143 FBRSQ9HAH7 460 aa12.19□□□□□ -0.46
PCNA-201ENST00000379143 PRMT8Q9NR22 394 aaPredicted RBP12.19□□□□□ -0.46
PCNA-201ENST00000379143 KLHL11Q9NVR0 708 aa12.19□□□□□ -0.46
PCNA-201ENST00000379143 CACNA2D2Q9NY47 1150 aa12.19□□□□□ -0.46
PCNA-201ENST00000379143 VPS51Q9UID3 782 aa12.19□□□□□ -0.46
PCNA-201ENST00000379143 HS3ST2Q9Y278 367 aa12.19□□□□□ -0.46
PCNA-201ENST00000379143 CAPN6Q9Y6Q1 641 aa12.19□□□□□ -0.46
PCNA-201ENST00000379143 MUC22E2RYF6 1773 aaPredicted RBP12.19□□□□□ -0.46
PCNA-201ENST00000379143 GOLGA6L9A6NEM1 432 aa12.18□□□□□ -0.46
PCNA-201ENST00000379143 C3orf70A6NLC5 250 aaPredicted RBP12.18□□□□□ -0.46
PCNA-201ENST00000379143 RASA4BC9J798 803 aa12.18□□□□□ -0.46
PCNA-201ENST00000379143 RASA4O43374 803 aa12.18□□□□□ -0.46
PCNA-201ENST00000379143 KDELR3O43731 214 aa12.18□□□□□ -0.46
PCNA-201ENST00000379143 ADAM23O75077 832 aa12.18□□□□□ -0.46
PCNA-201ENST00000379143 ALDH1A2O94788 518 aa12.18□□□□□ -0.46
PCNA-201ENST00000379143 EPHX1P07099 455 aa12.18□□□□□ -0.46
PCNA-201ENST00000379143 HOXA6P31267 233 aa12.18□□□□□ -0.46
PCNA-201ENST00000379143 ACVRL1P37023 503 aa12.18□□□□□ -0.46
PCNA-201ENST00000379143 CTSOP43234 321 aaPredicted RBP12.18□□□□□ -0.46
PCNA-201ENST00000379143 NRLP54845 237 aa12.18□□□□□ -0.46
PCNA-201ENST00000379143 RWDD2BP57060 319 aa12.18□□□□□ -0.46
PCNA-201ENST00000379143 COPS2P61201 443 aa12.18□□□□□ -0.46
PCNA-201ENST00000379143 MMRN1Q13201 1228 aa12.18□□□□□ -0.46
PCNA-201ENST00000379143 SERINC3Q13530 473 aa12.18□□□□□ -0.46
PCNA-201ENST00000379143 TFDP3Q5H9I0 405 aa12.18□□□□□ -0.46
PCNA-201ENST00000379143 AFMIDQ63HM1 303 aa12.18□□□□□ -0.46
PCNA-201ENST00000379143 ZNF354CQ86Y25 554 aa12.18□□□□□ -0.46
PCNA-201ENST00000379143 LRRC49Q8IUZ0 686 aa12.18□□□□□ -0.46
PCNA-201ENST00000379143 SH2D3CQ8N5H7 860 aa12.18□□□□□ -0.46
PCNA-201ENST00000379143 ATP11CQ8NB49 1132 aa12.18□□□□□ -0.46
PCNA-201ENST00000379143 PCDH19Q8TAB3 1148 aa12.18□□□□□ -0.46
PCNA-201ENST00000379143 CASKIN2Q8WXE0 1202 aa12.18□□□□□ -0.46
PCNA-201ENST00000379143 SPOCK2Q92563 424 aa12.18□□□□□ -0.46
PCNA-201ENST00000379143 RNF25Q96BH1 459 aaPredicted RBP12.18□□□□□ -0.46
PCNA-201ENST00000379143 MYO19Q96H55 970 aa12.18□□□□□ -0.46
PCNA-201ENST00000379143 RPL10LQ96L21 214 aaKnown RBP12.18□□□□□ -0.46
PCNA-201ENST00000379143 FAM126AQ9BYI3 521 aaPredicted RBP12.18□□□□□ -0.46
PCNA-201ENST00000379143 KLC2Q9H0B6 622 aa12.18□□□□□ -0.46
PCNA-201ENST00000379143 NOL6Q9H6R4 1146 aaKnown RBP12.18□□□□□ -0.46
PCNA-201ENST00000379143 ZDHHC4Q9NPG8 344 aa12.18□□□□□ -0.46
PCNA-201ENST00000379143 CHD5Q8TDI0 1954 aa12.18□□□□□ -0.46
PCNA-201ENST00000379143 CCDC163A0A0D9SF12 145 aa12.17□□□□□ -0.46
PCNA-201ENST00000379143 EDDM13A0A1B0GTR0 161 aa12.17□□□□□ -0.46
PCNA-201ENST00000379143 A0A1W2PQF6 199 aa12.17□□□□□ -0.46
PCNA-201ENST00000379143 TARSL2A2RTX5 802 aaKnown RBP12.17□□□□□ -0.46
PCNA-201ENST00000379143 ANTXRLA6NF34 631 aa12.17□□□□□ -0.46
PCNA-201ENST00000379143 WASH3PC4AMC7 463 aa12.17□□□□□ -0.46
PCNA-201ENST00000379143 ATP9BO43861 1147 aa12.17□□□□□ -0.46
PCNA-201ENST00000379143 SNAP91O60641 907 aa12.17□□□□□ -0.46
PCNA-201ENST00000379143 ZMPSTE24O75844 475 aa12.17□□□□□ -0.46
PCNA-201ENST00000379143 APBB3O95704 486 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms