RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 PPM1NQ8N819 430 aa11.97□□□□□ -0.49
NPHP4-202ENST00000378161 CATSPERZQ9NTU4 200 aa11.97□□□□□ -0.49
NPHP4-202ENST00000378161 ZDHHC18Q9NUE0 388 aa11.97□□□□□ -0.49
NPHP4-202ENST00000378161 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.97□□□□□ -0.49
NPHP4-202ENST00000378161 A0A0B4J203 849 aa11.97□□□□□ -0.49
NPHP4-202ENST00000378161 KCNH1O95259 989 aa11.97□□□□□ -0.49
NPHP4-202ENST00000378161 SMIM18P0DKX4 95 aa11.97□□□□□ -0.49
NPHP4-202ENST00000378161 GLULP15104 373 aa11.97□□□□□ -0.49
NPHP4-202ENST00000378161 PYHIN1Q6K0P9 492 aa11.97□□□□□ -0.49
NPHP4-202ENST00000378161 FIP1L1Q6UN15 594 aaKnown RBP11.97□□□□□ -0.49
NPHP4-202ENST00000378161 CARNMT1Q8N4J0 409 aa11.97□□□□□ -0.49
NPHP4-202ENST00000378161 ZNF555Q8NEP9 628 aa11.97□□□□□ -0.49
NPHP4-202ENST00000378161 MCFD2Q8NI22 146 aa11.97□□□□□ -0.49
NPHP4-202ENST00000378161 NCLNQ969V3 563 aa11.97□□□□□ -0.49
NPHP4-202ENST00000378161 PTCD3Q96EY7 689 aaKnown RBP11.97□□□□□ -0.49
NPHP4-202ENST00000378161 C17orf62Q9BQA9 187 aa11.97□□□□□ -0.49
NPHP4-202ENST00000378161 MTRRQ9UBK8 725 aa11.97□□□□□ -0.49
NPHP4-202ENST00000378161 PCYOX1Q9UHG3 505 aa11.97□□□□□ -0.49
NPHP4-202ENST00000378161 PACSIN3Q9UKS6 424 aa11.97□□□□□ -0.49
NPHP4-202ENST00000378161 RICTORQ6R327 1708 aa11.96□□□□□ -0.49
NPHP4-202ENST00000378161 APOL3O95236 402 aa11.96□□□□□ -0.49
NPHP4-202ENST00000378161 MUTP22033 750 aa11.96□□□□□ -0.49
NPHP4-202ENST00000378161 MCCD1P59942 119 aaPredicted RBP11.96□□□□□ -0.49
NPHP4-202ENST00000378161 SNAP25P60880 206 aa11.96□□□□□ -0.49
NPHP4-202ENST00000378161 UBAP2LQ14157 1087 aaKnown RBP11.96□□□□□ -0.49
NPHP4-202ENST00000378161 FGD3Q5JSP0 725 aa11.96□□□□□ -0.49
NPHP4-202ENST00000378161 KRT74Q7RTS7 529 aa11.96□□□□□ -0.49
NPHP4-202ENST00000378161 OR8H3Q8N146 312 aa11.96□□□□□ -0.49
NPHP4-202ENST00000378161 NLGN1Q8N2Q7 840 aa11.96□□□□□ -0.49
NPHP4-202ENST00000378161 RORBQ92753 470 aa11.96□□□□□ -0.49
NPHP4-202ENST00000378161 USP13Q92995 863 aaPredicted RBP11.96□□□□□ -0.49
NPHP4-202ENST00000378161 FAM213AQ9BRX8 229 aa11.96□□□□□ -0.49
NPHP4-202ENST00000378161 POLE4Q9NR33 117 aa11.96□□□□□ -0.49
NPHP4-202ENST00000378161 SLC39A1Q9NY26 324 aa11.96□□□□□ -0.49
NPHP4-202ENST00000378161 C4BPBP20851 252 aa11.96□□□□□ -0.49
NPHP4-202ENST00000378161 GSTM2P28161 218 aa11.96□□□□□ -0.49
NPHP4-202ENST00000378161 ADSSP30520 456 aa11.96□□□□□ -0.49
NPHP4-202ENST00000378161 TRAP1Q12931 704 aaKnown RBP11.96□□□□□ -0.49
NPHP4-202ENST00000378161 GRIK5Q16478 980 aa11.96□□□□□ -0.49
NPHP4-202ENST00000378161 KCNT1Q5JUK3 1230 aa11.96□□□□□ -0.49
NPHP4-202ENST00000378161 JADE1Q6IE81 842 aa11.96□□□□□ -0.49
NPHP4-202ENST00000378161 ERICH5Q6P6B1 374 aa11.96□□□□□ -0.49
NPHP4-202ENST00000378161 LAYNQ6UX15 382 aa11.96□□□□□ -0.49
NPHP4-202ENST00000378161 KCTD20Q7Z5Y7 419 aa11.96□□□□□ -0.49
NPHP4-202ENST00000378161 HERC6Q8IVU3 1022 aa11.96□□□□□ -0.49
NPHP4-202ENST00000378161 ZBTB8OSQ8IWT0 167 aa11.96□□□□□ -0.49
NPHP4-202ENST00000378161 KIAA0895Q8NCT3 520 aa11.96□□□□□ -0.49
NPHP4-202ENST00000378161 ZSCAN18Q8TBC5 510 aaPredicted RBP11.96□□□□□ -0.49
NPHP4-202ENST00000378161 PMM1Q92871 262 aa11.96□□□□□ -0.49
NPHP4-202ENST00000378161 NXNL1Q96CM4 212 aa11.96□□□□□ -0.49
NPHP4-202ENST00000378161 KCTD14Q9BQ13 255 aaPredicted RBP11.96□□□□□ -0.49
NPHP4-202ENST00000378161 UGT2A1Q9Y4X1 527 aa11.96□□□□□ -0.49
NPHP4-202ENST00000378161 FRMPD4Q14CM0 1322 aa11.96□□□□□ -0.5
NPHP4-202ENST00000378161 HMGN1P05114 100 aa11.96□□□□□ -0.5
NPHP4-202ENST00000378161 LSM3P62310 102 aaKnown RBP11.96□□□□□ -0.5
NPHP4-202ENST00000378161 IL1RL1Q01638 556 aa11.96□□□□□ -0.5
NPHP4-202ENST00000378161 MORF4L2Q15014 288 aa11.96□□□□□ -0.5
NPHP4-202ENST00000378161 CACHD1Q5VU97 1274 aa11.96□□□□□ -0.5
NPHP4-202ENST00000378161 FAM91A1Q658Y4 838 aa11.96□□□□□ -0.5
NPHP4-202ENST00000378161 TBC1D15Q8TC07 691 aa11.96□□□□□ -0.5
NPHP4-202ENST00000378161 HES6Q96HZ4 224 aa11.96□□□□□ -0.5
NPHP4-202ENST00000378161 CD274Q9NZQ7 290 aa11.96□□□□□ -0.5
NPHP4-202ENST00000378161 CYTH4Q9UIA0 394 aa11.96□□□□□ -0.5
NPHP4-202ENST00000378161 C2orf71A6NGG8 1288 aa11.95□□□□□ -0.5
NPHP4-202ENST00000378161 TFECO14948 347 aaPredicted RBP11.95□□□□□ -0.5
NPHP4-202ENST00000378161 GH2P01242 217 aa11.95□□□□□ -0.5
NPHP4-202ENST00000378161 CD9P21926 228 aa11.95□□□□□ -0.5
NPHP4-202ENST00000378161 HSPA14Q0VDF9 509 aa11.95□□□□□ -0.5
NPHP4-202ENST00000378161 PLD1Q13393 1074 aa11.95□□□□□ -0.5
NPHP4-202ENST00000378161 BTBD8Q5XKL5 378 aa11.95□□□□□ -0.5
NPHP4-202ENST00000378161 KRT39Q6A163 491 aa11.95□□□□□ -0.5
NPHP4-202ENST00000378161 CLEC4FQ8N1N0 589 aa11.95□□□□□ -0.5
NPHP4-202ENST00000378161 RNASE11Q8TAA1 199 aaKnown RBP11.95□□□□□ -0.5
NPHP4-202ENST00000378161 TMEM121Q9BTD3 319 aa11.95□□□□□ -0.5
NPHP4-202ENST00000378161 PDCD10Q9BUL8 212 aa11.95□□□□□ -0.5
NPHP4-202ENST00000378161 CYP4F12Q9HCS2 524 aa11.95□□□□□ -0.5
NPHP4-202ENST00000378161 ATP13A2Q9NQ11 1180 aa11.95□□□□□ -0.5
NPHP4-202ENST00000378161 PCDHB16Q9NRJ7 776 aa11.95□□□□□ -0.5
NPHP4-202ENST00000378161 E7ENX8 843 aa11.95□□□□□ -0.5
NPHP4-202ENST00000378161 MSI1O43347 362 aaKnown RBP11.95□□□□□ -0.5
NPHP4-202ENST00000378161 SLC37A4O43826 429 aa11.95□□□□□ -0.5
NPHP4-202ENST00000378161 ATP5OP48047 213 aa11.95□□□□□ -0.5
NPHP4-202ENST00000378161 POLD2P49005 469 aa11.95□□□□□ -0.5
NPHP4-202ENST00000378161 NME5P56597 212 aa11.95□□□□□ -0.5
NPHP4-202ENST00000378161 PRKCEQ02156 737 aa11.95□□□□□ -0.5
NPHP4-202ENST00000378161 NPTX1Q15818 432 aa11.95□□□□□ -0.5
NPHP4-202ENST00000378161 SWI5Q1ZZU3 235 aa11.95□□□□□ -0.5
NPHP4-202ENST00000378161 PAOXQ6QHF9 649 aa11.95□□□□□ -0.5
NPHP4-202ENST00000378161 DPY19L3Q6ZPD9 716 aa11.95□□□□□ -0.5
NPHP4-202ENST00000378161 ZNF767PQ75MW2 155 aa11.95□□□□□ -0.5
NPHP4-202ENST00000378161 RELL1Q8IUW5 271 aa11.95□□□□□ -0.5
NPHP4-202ENST00000378161 RIN3Q8TB24 985 aa11.95□□□□□ -0.5
NPHP4-202ENST00000378161 TMEM168Q9H0V1 697 aa11.95□□□□□ -0.5
NPHP4-202ENST00000378161 DNAJC18Q9H819 358 aa11.95□□□□□ -0.5
NPHP4-202ENST00000378161 DBNDD1Q9H9R9 158 aa11.95□□□□□ -0.5
NPHP4-202ENST00000378161 POLE3Q9NRF9 147 aa11.95□□□□□ -0.5
NPHP4-202ENST00000378161 HAAOP46952 286 aa11.95□□□□□ -0.5
NPHP4-202ENST00000378161 NFATC3Q12968 1075 aa11.95□□□□□ -0.5
NPHP4-202ENST00000378161 PRPSAP1Q14558 356 aa11.95□□□□□ -0.5
NPHP4-202ENST00000378161 ANGPT1Q15389 498 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms