RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 GSTA2P09210 222 aa13.18□□□□□ -0.3
USP11-204ENST00000377107 HNRNPLP14866 589 aaKnown RBP eCLIP13.18□□□□□ -0.3
USP11-204ENST00000377107 GRK2P25098 689 aa13.18□□□□□ -0.3
USP11-204ENST00000377107 MAVSQ7Z434 540 aa13.18□□□□□ -0.3
USP11-204ENST00000377107 OR6P1Q8NGX9 317 aa13.18□□□□□ -0.3
USP11-204ENST00000377107 PIP4K2CQ8TBX8 421 aa13.18□□□□□ -0.3
USP11-204ENST00000377107 BRI3BPQ8WY22 251 aa13.18□□□□□ -0.3
USP11-204ENST00000377107 ACE2Q9BYF1 805 aaPredicted RBP13.18□□□□□ -0.3
USP11-204ENST00000377107 ILKAPQ9H0C8 392 aaPredicted RBP13.18□□□□□ -0.3
USP11-204ENST00000377107 ZCWPW1Q9H0M4 648 aa13.18□□□□□ -0.3
USP11-204ENST00000377107 ZNF212Q9UDV6 495 aa13.18□□□□□ -0.3
USP11-204ENST00000377107 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.17□□□□□ -0.3
USP11-204ENST00000377107 DAB1O75553 588 aa13.17□□□□□ -0.3
USP11-204ENST00000377107 ETS2P15036 469 aa13.17□□□□□ -0.3
USP11-204ENST00000377107 PEX2P28328 305 aa13.17□□□□□ -0.3
USP11-204ENST00000377107 CHRNA4P43681 627 aa13.17□□□□□ -0.3
USP11-204ENST00000377107 GRIA4P48058 902 aa13.17□□□□□ -0.3
USP11-204ENST00000377107 PSEN2P49810 448 aa13.17□□□□□ -0.3
USP11-204ENST00000377107 GRTP1Q5TC63 336 aa13.17□□□□□ -0.3
USP11-204ENST00000377107 KIAA0319Q5VV43 1072 aa13.17□□□□□ -0.3
USP11-204ENST00000377107 OLFML2BQ68BL8 750 aa13.17□□□□□ -0.3
USP11-204ENST00000377107 NET1Q7Z628 596 aaPredicted RBP13.17□□□□□ -0.3
USP11-204ENST00000377107 FAM35AQ86V20 835 aa13.17□□□□□ -0.3
USP11-204ENST00000377107 LINC01465Q8N7H1 131 aa13.17□□□□□ -0.3
USP11-204ENST00000377107 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.17□□□□□ -0.3
USP11-204ENST00000377107 PABPC5Q96DU9 382 aaKnown RBP13.17□□□□□ -0.3
USP11-204ENST00000377107 PHF21BQ96EK2 531 aa13.17□□□□□ -0.3
USP11-204ENST00000377107 CDRT15Q96T59 188 aa13.17□□□□□ -0.3
USP11-204ENST00000377107 COLEC11Q9BWP8 271 aa13.17□□□□□ -0.3
USP11-204ENST00000377107 EBF3Q9H4W6 596 aa13.17□□□□□ -0.3
USP11-204ENST00000377107 SPATS2LQ9NUQ6 558 aaKnown RBP13.17□□□□□ -0.3
USP11-204ENST00000377107 CDY2AQ9Y6F7 541 aa13.17□□□□□ -0.3
USP11-204ENST00000377107 CDY1Q9Y6F8 540 aa13.17□□□□□ -0.3
USP11-204ENST00000377107 STX16-NPEPL1H3BU86 382 aa13.17□□□□□ -0.3
USP11-204ENST00000377107 COX4I1P13073 169 aa13.17□□□□□ -0.3
USP11-204ENST00000377107 NME5P56597 212 aa13.17□□□□□ -0.3
USP11-204ENST00000377107 ACTR3P61158 418 aa13.17□□□□□ -0.3
USP11-204ENST00000377107 MAXP61244 160 aa13.17□□□□□ -0.3
USP11-204ENST00000377107 MRPS22P82650 360 aaKnown RBP13.17□□□□□ -0.3
USP11-204ENST00000377107 CNGA3Q16281 694 aa13.17□□□□□ -0.3
USP11-204ENST00000377107 MMEL1Q495T6 779 aa13.17□□□□□ -0.3
USP11-204ENST00000377107 FSCBQ5H9T9 825 aa13.17□□□□□ -0.3
USP11-204ENST00000377107 GNASQ5JWF2 1037 aa13.17□□□□□ -0.3
USP11-204ENST00000377107 LDB1Q86U70 411 aaPredicted RBP13.17□□□□□ -0.3
USP11-204ENST00000377107 ATPAF2Q8N5M1 289 aa13.17□□□□□ -0.3
USP11-204ENST00000377107 ZSCAN18Q8TBC5 510 aaPredicted RBP13.17□□□□□ -0.3
USP11-204ENST00000377107 GDPD5Q8WTR4 605 aa13.17□□□□□ -0.3
USP11-204ENST00000377107 CENPIQ92674 756 aaPredicted RBP13.17□□□□□ -0.3
USP11-204ENST00000377107 NPY6RQ99463 290 aa13.17□□□□□ -0.3
USP11-204ENST00000377107 RBBP8Q99708 897 aa13.17□□□□□ -0.3
USP11-204ENST00000377107 SMOQ99835 787 aa13.17□□□□□ -0.3
USP11-204ENST00000377107 NAT9Q9BTE0 207 aa13.17□□□□□ -0.3
USP11-204ENST00000377107 TMEM30AQ9NV96 361 aa13.17□□□□□ -0.3
USP11-204ENST00000377107 ARHGAP26Q9UNA1 814 aa13.17□□□□□ -0.3
USP11-204ENST00000377107 A0A088AWK7 358 aa13.17□□□□□ -0.3
USP11-204ENST00000377107 ZBTB14O43829 449 aa13.17□□□□□ -0.3
USP11-204ENST00000377107 MAGEC1O60732 1142 aa13.17□□□□□ -0.3
USP11-204ENST00000377107 THP07101 528 aa13.17□□□□□ -0.3
USP11-204ENST00000377107 OR4Q2P0C623 313 aa13.17□□□□□ -0.3
USP11-204ENST00000377107 ETFBP38117 255 aa13.17□□□□□ -0.3
USP11-204ENST00000377107 MAGEA3P43357 314 aa13.17□□□□□ -0.3
USP11-204ENST00000377107 CXCR3P49682 368 aa13.17□□□□□ -0.3
USP11-204ENST00000377107 NIPAL4Q0D2K0 466 aa13.17□□□□□ -0.3
USP11-204ENST00000377107 CSHL1Q14406 222 aa13.17□□□□□ -0.3
USP11-204ENST00000377107 ZBTB6Q15916 424 aa13.17□□□□□ -0.3
USP11-204ENST00000377107 SPANXN3Q5MJ09 141 aa13.17□□□□□ -0.3
USP11-204ENST00000377107 CXCL17Q6UXB2 119 aa13.17□□□□□ -0.3
USP11-204ENST00000377107 SPATA24Q86W54 205 aa13.17□□□□□ -0.3
USP11-204ENST00000377107 IFNLR1Q8IU57 520 aaPredicted RBP13.17□□□□□ -0.3
USP11-204ENST00000377107 OLFM3Q96PB7 478 aa13.17□□□□□ -0.3
USP11-204ENST00000377107 HNRNPABQ99729 332 aaKnown RBP13.17□□□□□ -0.3
USP11-204ENST00000377107 I6L893 689 aaPredicted RBP13.16□□□□□ -0.3
USP11-204ENST00000377107 STRNO43815 780 aa13.16□□□□□ -0.3
USP11-204ENST00000377107 ARL13AQ5H913 290 aaPredicted RBP13.16□□□□□ -0.3
USP11-204ENST00000377107 ITPRIPL1Q6GPH6 555 aa13.16□□□□□ -0.3
USP11-204ENST00000377107 IRGCQ6NXR0 463 aa13.16□□□□□ -0.3
USP11-204ENST00000377107 PAQR9Q6ZVX9 377 aa13.16□□□□□ -0.3
USP11-204ENST00000377107 GPR152Q8TDT2 470 aa13.16□□□□□ -0.3
USP11-204ENST00000377107 SORT1Q99523 831 aa13.16□□□□□ -0.3
USP11-204ENST00000377107 ECSITQ9BQ95 431 aa13.16□□□□□ -0.3
USP11-204ENST00000377107 SLC2A6Q9UGQ3 507 aa13.16□□□□□ -0.3
USP11-204ENST00000377107 CDH22Q9UJ99 828 aa13.16□□□□□ -0.3
USP11-204ENST00000377107 C17orf102A2RUQ5 167 aa13.16□□□□□ -0.3
USP11-204ENST00000377107 MGAMO43451 1857 aa13.16□□□□□ -0.3
USP11-204ENST00000377107 AP2A1O95782 977 aa13.16□□□□□ -0.3
USP11-204ENST00000377107 ARSAP15289 507 aa13.16□□□□□ -0.3
USP11-204ENST00000377107 GRIK1P39086 918 aa13.16□□□□□ -0.3
USP11-204ENST00000377107 KLF10Q13118 480 aa13.16□□□□□ -0.3
USP11-204ENST00000377107 ZNF470Q6ECI4 717 aa13.16□□□□□ -0.3
USP11-204ENST00000377107 ESRP1Q6NXG1 681 aaKnown RBP13.16□□□□□ -0.3
USP11-204ENST00000377107 TMC7Q7Z402 723 aa13.16□□□□□ -0.3
USP11-204ENST00000377107 MMADHCQ9H3L0 296 aaPredicted RBP13.16□□□□□ -0.3
USP11-204ENST00000377107 ARL1P40616 181 aaPredicted RBP13.16□□□□□ -0.3
USP11-204ENST00000377107 DAOAP59103 153 aa13.16□□□□□ -0.3
USP11-204ENST00000377107 CDC16Q13042 620 aa13.16□□□□□ -0.3
USP11-204ENST00000377107 SEL1L3Q68CR1 1132 aa13.16□□□□□ -0.3
USP11-204ENST00000377107 IQSEC1Q6DN90 963 aa13.16□□□□□ -0.3
USP11-204ENST00000377107 TUBGCP5Q96RT8 1024 aa13.16□□□□□ -0.3
USP11-204ENST00000377107 MLPHQ9BV36 600 aaPredicted RBP13.16□□□□□ -0.3
USP11-204ENST00000377107 RBM22Q9NW64 420 aaKnown RBP eCLIP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms