RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 MIS12Q9H081 205 aa12.73□□□□□ -0.37
VRK3-202ENST00000377011 ZDHHC4Q9NPG8 344 aa12.73□□□□□ -0.37
VRK3-202ENST00000377011 HAUS2Q9NVX0 235 aa12.73□□□□□ -0.37
VRK3-202ENST00000377011 DDX56Q9NY93 547 aaKnown RBP12.73□□□□□ -0.37
VRK3-202ENST00000377011 SENP1Q9P0U3 644 aa12.73□□□□□ -0.37
VRK3-202ENST00000377011 HESX1Q9UBX0 185 aa12.73□□□□□ -0.37
VRK3-202ENST00000377011 SFMBT1Q9UHJ3 866 aa12.73□□□□□ -0.37
VRK3-202ENST00000377011 ZNF292O60281 2723 aa12.73□□□□□ -0.37
VRK3-202ENST00000377011 RIF1Q5UIP0 2472 aaKnown RBP12.73□□□□□ -0.37
VRK3-202ENST00000377011 DMXL1Q9Y485 3027 aa12.72□□□□□ -0.37
VRK3-202ENST00000377011 MSI1O43347 362 aaKnown RBP12.72□□□□□ -0.37
VRK3-202ENST00000377011 GJB6O95452 261 aa12.72□□□□□ -0.37
VRK3-202ENST00000377011 EZRP15311 586 aaKnown RBP12.72□□□□□ -0.37
VRK3-202ENST00000377011 TAS2R40P59535 323 aa12.72□□□□□ -0.37
VRK3-202ENST00000377011 PITX1P78337 314 aaPredicted RBP12.72□□□□□ -0.37
VRK3-202ENST00000377011 DMWDQ09019 674 aa12.72□□□□□ -0.37
VRK3-202ENST00000377011 PDGFRLQ15198 375 aa12.72□□□□□ -0.37
VRK3-202ENST00000377011 SPRED3Q2MJR0 410 aa12.72□□□□□ -0.37
VRK3-202ENST00000377011 LY6G5CQ5SRR4 150 aa12.72□□□□□ -0.37
VRK3-202ENST00000377011 ANKS1BQ7Z6G8 1248 aa12.72□□□□□ -0.37
VRK3-202ENST00000377011 RALGPS2Q86X27 583 aaPredicted RBP12.72□□□□□ -0.37
VRK3-202ENST00000377011 NIPA2Q8N8Q9 360 aa12.72□□□□□ -0.37
VRK3-202ENST00000377011 UHMK1Q8TAS1 419 aaKnown RBP12.72□□□□□ -0.37
VRK3-202ENST00000377011 KCTD13Q8WZ19 329 aa12.72□□□□□ -0.37
VRK3-202ENST00000377011 C8orf33Q9H7E9 229 aaPredicted RBP12.72□□□□□ -0.37
VRK3-202ENST00000377011 LRRC4Q9HBW1 653 aa12.72□□□□□ -0.37
VRK3-202ENST00000377011 NKIRAS1Q9NYS0 192 aa12.72□□□□□ -0.37
VRK3-202ENST00000377011 KIAA1257Q9ULG3 409 aa12.72□□□□□ -0.37
VRK3-202ENST00000377011 EFR3BQ9Y2G0 817 aa12.72□□□□□ -0.37
VRK3-202ENST00000377011 R3HDM2Q9Y2K5 976 aaKnown RBP12.72□□□□□ -0.37
VRK3-202ENST00000377011 TMEM191CA6NGB0 347 aa12.71□□□□□ -0.37
VRK3-202ENST00000377011 MAN2B1O00754 1011 aa12.71□□□□□ -0.37
VRK3-202ENST00000377011 DNALI1O14645 258 aaPredicted RBP12.71□□□□□ -0.37
VRK3-202ENST00000377011 PAPSS1O43252 624 aaPredicted RBP12.71□□□□□ -0.37
VRK3-202ENST00000377011 LIASO43766 372 aa12.71□□□□□ -0.37
VRK3-202ENST00000377011 STC2O76061 302 aa12.71□□□□□ -0.37
VRK3-202ENST00000377011 CHRM1P11229 460 aaPredicted RBP12.71□□□□□ -0.37
VRK3-202ENST00000377011 BRAFP15056 766 aa12.71□□□□□ -0.37
VRK3-202ENST00000377011 PFKLP17858 780 aa12.71□□□□□ -0.37
VRK3-202ENST00000377011 CDH5P33151 784 aaPredicted RBP12.71□□□□□ -0.37
VRK3-202ENST00000377011 ATP5C1P36542 298 aaKnown RBP12.71□□□□□ -0.37
VRK3-202ENST00000377011 RPL34P49207 117 aaKnown RBP12.71□□□□□ -0.37
VRK3-202ENST00000377011 SATB1Q01826 763 aa12.71□□□□□ -0.37
VRK3-202ENST00000377011 PIGHQ14442 188 aaPredicted RBP12.71□□□□□ -0.37
VRK3-202ENST00000377011 MORF4L2Q15014 288 aa12.71□□□□□ -0.37
VRK3-202ENST00000377011 KYNUQ16719 465 aa12.71□□□□□ -0.37
VRK3-202ENST00000377011 KCTD19Q17RG1 926 aaPredicted RBP12.71□□□□□ -0.37
VRK3-202ENST00000377011 GALNTL6Q49A17 601 aa12.71□□□□□ -0.37
VRK3-202ENST00000377011 TMEM196Q5HYL7 178 aa12.71□□□□□ -0.37
VRK3-202ENST00000377011 BSPRYQ5W0U4 402 aa12.71□□□□□ -0.37
VRK3-202ENST00000377011 C1orf210Q8IVY1 113 aa12.71□□□□□ -0.37
VRK3-202ENST00000377011 NAT16Q8N8M0 369 aa12.71□□□□□ -0.37
VRK3-202ENST00000377011 CCDC63Q8NA47 563 aa12.71□□□□□ -0.37
VRK3-202ENST00000377011 BHMTQ93088 406 aa12.71□□□□□ -0.37
VRK3-202ENST00000377011 OSBPL6Q9BZF3 934 aa12.71□□□□□ -0.37
VRK3-202ENST00000377011 NACA2Q9H009 215 aa12.71□□□□□ -0.37
VRK3-202ENST00000377011 CHRDQ9H2X0 955 aa12.71□□□□□ -0.37
VRK3-202ENST00000377011 SPATA6Q9NWH7 488 aaPredicted RBP12.71□□□□□ -0.37
VRK3-202ENST00000377011 FETUBQ9UGM5 382 aa12.71□□□□□ -0.37
VRK3-202ENST00000377011 ARL2BPQ9Y2Y0 163 aa12.71□□□□□ -0.37
VRK3-202ENST00000377011 R4GN57 208 aa12.71□□□□□ -0.37
VRK3-202ENST00000377011 MYO18AQ92614 2054 aaKnown RBP12.71□□□□□ -0.37
VRK3-202ENST00000377011 LAMA1P25391 3075 aa12.71□□□□□ -0.37
VRK3-202ENST00000377011 EP300Q09472 2414 aaPredicted RBP12.71□□□□□ -0.38
VRK3-202ENST00000377011 DNAH14Q0VDD8 3507 aa12.71□□□□□ -0.38
VRK3-202ENST00000377011 E5RJQ4 531 aa12.71□□□□□ -0.38
VRK3-202ENST00000377011 TRDMT1O14717 391 aaKnown RBP12.71□□□□□ -0.38
VRK3-202ENST00000377011 SETSIPP0DME0 302 aa12.71□□□□□ -0.38
VRK3-202ENST00000377011 PLA2G5P39877 138 aa12.71□□□□□ -0.38
VRK3-202ENST00000377011 SKIV2L2P42285 1042 aaKnown RBP12.71□□□□□ -0.38
VRK3-202ENST00000377011 CCDC15Q0P6D6 951 aa12.71□□□□□ -0.38
VRK3-202ENST00000377011 C2CD6Q53TS8 623 aa12.71□□□□□ -0.38
VRK3-202ENST00000377011 Q6ZNB5 142 aa12.71□□□□□ -0.38
VRK3-202ENST00000377011 RGS9BPQ6ZS82 235 aa12.71□□□□□ -0.38
VRK3-202ENST00000377011 POLNQ7Z5Q5 900 aa12.71□□□□□ -0.38
VRK3-202ENST00000377011 ATP2A3Q93084 1043 aa12.71□□□□□ -0.38
VRK3-202ENST00000377011 NKD2Q969F2 451 aaPredicted RBP12.71□□□□□ -0.38
VRK3-202ENST00000377011 CPXM1Q96SM3 734 aa12.71□□□□□ -0.38
VRK3-202ENST00000377011 SLC4A5Q9BY07 1137 aa12.71□□□□□ -0.38
VRK3-202ENST00000377011 CLIC5Q9NZA1 410 aa12.71□□□□□ -0.38
VRK3-202ENST00000377011 MCM8Q9UJA3 840 aa12.71□□□□□ -0.38
VRK3-202ENST00000377011 HCN2Q9UL51 889 aa12.71□□□□□ -0.38
VRK3-202ENST00000377011 PCDHGC3Q9UN70 934 aa12.71□□□□□ -0.38
VRK3-202ENST00000377011 SHOC2Q9UQ13 582 aa12.71□□□□□ -0.38
VRK3-202ENST00000377011 FANCMQ8IYD8 2048 aa12.7□□□□□ -0.38
VRK3-202ENST00000377011 TCRBV5S1A1TA0A578 114 aa12.7□□□□□ -0.38
VRK3-202ENST00000377011 E2F8A0AVK6 867 aa12.7□□□□□ -0.38
VRK3-202ENST00000377011 TCP11X1B4DZS4 312 aa12.7□□□□□ -0.38
VRK3-202ENST00000377011 SMAPO00193 183 aa12.7□□□□□ -0.38
VRK3-202ENST00000377011 ITGAVP06756 1048 aa12.7□□□□□ -0.38
VRK3-202ENST00000377011 SP9P0CG40 484 aa12.7□□□□□ -0.38
VRK3-202ENST00000377011 TDGF1P13385 188 aa12.7□□□□□ -0.38
VRK3-202ENST00000377011 STX2P32856 288 aa12.7□□□□□ -0.38
VRK3-202ENST00000377011 MAGEA4P43358 317 aa12.7□□□□□ -0.38
VRK3-202ENST00000377011 MLLT6P55198 1093 aaPredicted RBP12.7□□□□□ -0.38
VRK3-202ENST00000377011 ELF3P78545 371 aaPredicted RBP12.7□□□□□ -0.38
VRK3-202ENST00000377011 CCDC38Q502W7 563 aa12.7□□□□□ -0.38
VRK3-202ENST00000377011 SYPL2Q5VXT5 272 aa12.7□□□□□ -0.38
VRK3-202ENST00000377011 RNF43Q68DV7 783 aa12.7□□□□□ -0.38
VRK3-202ENST00000377011 TPGS1Q6ZTW0 290 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms