RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 SOX4Q06945 474 aaPredicted RBP13.48□□□□□ -0.25
ACTN1-202ENST00000376839 ZBTB17Q13105 803 aa13.48□□□□□ -0.25
ACTN1-202ENST00000376839 SNAPC2Q13487 334 aa13.48□□□□□ -0.25
ACTN1-202ENST00000376839 METTL21CQ5VZV1 264 aa13.48□□□□□ -0.25
ACTN1-202ENST00000376839 KCTD11Q693B1 232 aa13.48□□□□□ -0.25
ACTN1-202ENST00000376839 B3GALNT2Q8NCR0 500 aa13.48□□□□□ -0.25
ACTN1-202ENST00000376839 DCUN1D1Q96GG9 259 aa13.48□□□□□ -0.25
ACTN1-202ENST00000376839 OSMRQ99650 979 aa13.48□□□□□ -0.25
ACTN1-202ENST00000376839 ACE2Q9BYF1 805 aaPredicted RBP13.48□□□□□ -0.25
ACTN1-202ENST00000376839 NUF2Q9BZD4 464 aa13.48□□□□□ -0.25
ACTN1-202ENST00000376839 ADAMTS10Q9H324 1103 aa13.48□□□□□ -0.25
ACTN1-202ENST00000376839 DMAP1Q9NPF5 467 aaPredicted RBP13.48□□□□□ -0.25
ACTN1-202ENST00000376839 OXSMQ9NWU1 459 aa13.48□□□□□ -0.25
ACTN1-202ENST00000376839 STK39Q9UEW8 545 aa13.48□□□□□ -0.25
ACTN1-202ENST00000376839 SLC39A10Q9ULF5 831 aa13.48□□□□□ -0.25
ACTN1-202ENST00000376839 PSMD13Q9UNM6 376 aa13.48□□□□□ -0.25
ACTN1-202ENST00000376839 C15orf38-AP3S2A0A0A6YYH1 394 aa13.47□□□□□ -0.25
ACTN1-202ENST00000376839 PHGDHO43175 533 aaKnown RBP13.47□□□□□ -0.25
ACTN1-202ENST00000376839 PGM3O95394 542 aa13.47□□□□□ -0.25
ACTN1-202ENST00000376839 PABPC4LP0CB38 370 aaKnown RBP13.47□□□□□ -0.25
ACTN1-202ENST00000376839 CYP2B6P20813 491 aa13.47□□□□□ -0.25
ACTN1-202ENST00000376839 GLRBP48167 497 aa13.47□□□□□ -0.25
ACTN1-202ENST00000376839 MRPS22P82650 360 aaKnown RBP13.47□□□□□ -0.25
ACTN1-202ENST00000376839 PPP2R5DQ14738 602 aa13.47□□□□□ -0.25
ACTN1-202ENST00000376839 GRM3Q14832 879 aa13.47□□□□□ -0.25
ACTN1-202ENST00000376839 POTEAQ6S8J7 498 aa13.47□□□□□ -0.25
ACTN1-202ENST00000376839 ARPINQ7Z6K5 226 aa13.47□□□□□ -0.25
ACTN1-202ENST00000376839 ZNF410Q86VK4 478 aa13.47□□□□□ -0.25
ACTN1-202ENST00000376839 DSELQ8IZU8 1212 aa13.47□□□□□ -0.25
ACTN1-202ENST00000376839 TMEM151AQ8N4L1 468 aa13.47□□□□□ -0.25
ACTN1-202ENST00000376839 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.47□□□□□ -0.25
ACTN1-202ENST00000376839 APPL2Q8NEU8 664 aa13.47□□□□□ -0.25
ACTN1-202ENST00000376839 RCN3Q96D15 328 aa13.47□□□□□ -0.25
ACTN1-202ENST00000376839 MARK4Q96L34 752 aa13.47□□□□□ -0.25
ACTN1-202ENST00000376839 MCMBPQ9BTE3 642 aa13.47□□□□□ -0.25
ACTN1-202ENST00000376839 ILKAPQ9H0C8 392 aaPredicted RBP13.47□□□□□ -0.25
ACTN1-202ENST00000376839 RNF39Q9H2S5 420 aa13.47□□□□□ -0.25
ACTN1-202ENST00000376839 MROH8Q9H579 483 aa13.47□□□□□ -0.25
ACTN1-202ENST00000376839 TASP1Q9H6P5 420 aa13.47□□□□□ -0.25
ACTN1-202ENST00000376839 ETAA1Q9NY74 926 aa13.47□□□□□ -0.25
ACTN1-202ENST00000376839 UBQLN1Q9UMX0 589 aaKnown RBP13.47□□□□□ -0.25
ACTN1-202ENST00000376839 SMIM28A0A1B0GU29 152 aa13.47□□□□□ -0.25
ACTN1-202ENST00000376839 NRP1O14786 923 aa13.47□□□□□ -0.25
ACTN1-202ENST00000376839 GRID2O43424 1007 aa13.47□□□□□ -0.25
ACTN1-202ENST00000376839 PEX1O43933 1283 aa13.47□□□□□ -0.25
ACTN1-202ENST00000376839 FYNP06241 537 aa13.47□□□□□ -0.25
ACTN1-202ENST00000376839 SMIM18P0DKX4 95 aa13.47□□□□□ -0.25
ACTN1-202ENST00000376839 NMBRP28336 390 aa13.47□□□□□ -0.25
ACTN1-202ENST00000376839 GRIA4P48058 902 aa13.47□□□□□ -0.25
ACTN1-202ENST00000376839 ATXN3P54252 364 aaPredicted RBP13.47□□□□□ -0.25
ACTN1-202ENST00000376839 PKNOX1P55347 436 aa13.47□□□□□ -0.25
ACTN1-202ENST00000376839 ARL13AQ5H913 290 aaPredicted RBP13.47□□□□□ -0.25
ACTN1-202ENST00000376839 MAP3K21Q5TCX8 1036 aa13.47□□□□□ -0.25
ACTN1-202ENST00000376839 PAQR9Q6ZVX9 377 aa13.47□□□□□ -0.25
ACTN1-202ENST00000376839 CTU1Q7Z7A3 348 aaKnown RBP13.47□□□□□ -0.25
ACTN1-202ENST00000376839 SDCCAG8Q86SQ7 713 aaPredicted RBP13.47□□□□□ -0.25
ACTN1-202ENST00000376839 ERO1BQ86YB8 467 aa13.47□□□□□ -0.25
ACTN1-202ENST00000376839 RNF148Q8N7C7 305 aa13.47□□□□□ -0.25
ACTN1-202ENST00000376839 SLC7A14Q8TBB6 771 aa13.47□□□□□ -0.25
ACTN1-202ENST00000376839 WNT8BQ93098 351 aa13.47□□□□□ -0.25
ACTN1-202ENST00000376839 CDRT15Q96T59 188 aa13.47□□□□□ -0.25
ACTN1-202ENST00000376839 DUSP16Q9BY84 665 aa13.47□□□□□ -0.25
ACTN1-202ENST00000376839 ZDHHC2Q9UIJ5 367 aa13.47□□□□□ -0.25
ACTN1-202ENST00000376839 SNX10Q9Y5X0 201 aa13.47□□□□□ -0.25
ACTN1-202ENST00000376839 SBF1O95248 1867 aa13.47□□□□□ -0.25
ACTN1-202ENST00000376839 NUP205Q92621 2012 aa13.47□□□□□ -0.25
ACTN1-202ENST00000376839 RGSL1A5PLK6 1076 aa13.46□□□□□ -0.25
ACTN1-202ENST00000376839 ANKRD33BA6NCL7 494 aa13.46□□□□□ -0.25
ACTN1-202ENST00000376839 HDAC3O15379 428 aa13.46□□□□□ -0.25
ACTN1-202ENST00000376839 PIGNO95427 931 aa13.46□□□□□ -0.25
ACTN1-202ENST00000376839 SPATA31D3P0C874 917 aa13.46□□□□□ -0.25
ACTN1-202ENST00000376839 THRAP10827 490 aa13.46□□□□□ -0.25
ACTN1-202ENST00000376839 NFKB1P19838 968 aa13.46□□□□□ -0.25
ACTN1-202ENST00000376839 IGFBP6P24592 240 aaPredicted RBP13.46□□□□□ -0.25
ACTN1-202ENST00000376839 ADRA1BP35368 520 aa13.46□□□□□ -0.25
ACTN1-202ENST00000376839 AVPR1AP37288 418 aa13.46□□□□□ -0.25
ACTN1-202ENST00000376839 DPP6P42658 865 aa13.46□□□□□ -0.25
ACTN1-202ENST00000376839 SEL1L3Q68CR1 1132 aa13.46□□□□□ -0.25
ACTN1-202ENST00000376839 SPATA31D4Q6ZUB0 917 aa13.46□□□□□ -0.25
ACTN1-202ENST00000376839 KYQ8NBH2 561 aa13.46□□□□□ -0.25
ACTN1-202ENST00000376839 NAT14Q8WUY8 206 aa13.46□□□□□ -0.25
ACTN1-202ENST00000376839 USP13Q92995 863 aaPredicted RBP13.46□□□□□ -0.25
ACTN1-202ENST00000376839 CNDP1Q96KN2 507 aa13.46□□□□□ -0.25
ACTN1-202ENST00000376839 CATSPER2Q96P56 530 aa13.46□□□□□ -0.25
ACTN1-202ENST00000376839 BTBD9Q96Q07 612 aa13.46□□□□□ -0.25
ACTN1-202ENST00000376839 C1QTNF1Q9BXJ1 281 aa13.46□□□□□ -0.25
ACTN1-202ENST00000376839 PRDM16Q9HAZ2 1276 aa13.46□□□□□ -0.25
ACTN1-202ENST00000376839 STAP1Q9ULZ2 295 aa13.46□□□□□ -0.25
ACTN1-202ENST00000376839 RAP2CQ9Y3L5 183 aa13.46□□□□□ -0.25
ACTN1-202ENST00000376839 STX16-NPEPL1H3BU86 382 aa13.46□□□□□ -0.25
ACTN1-202ENST00000376839 CXCL11O14625 94 aa13.46□□□□□ -0.25
ACTN1-202ENST00000376839 CFLARO15519 480 aa13.46□□□□□ -0.25
ACTN1-202ENST00000376839 TIMM44O43615 452 aa13.46□□□□□ -0.25
ACTN1-202ENST00000376839 NAGLUP54802 743 aa13.46□□□□□ -0.25
ACTN1-202ENST00000376839 MS4A2Q01362 244 aa13.46□□□□□ -0.25
ACTN1-202ENST00000376839 PPIDQ08752 370 aaKnown RBP13.46□□□□□ -0.25
ACTN1-202ENST00000376839 ZNF423Q2M1K9 1284 aa13.46□□□□□ -0.25
ACTN1-202ENST00000376839 SLC2A13Q96QE2 648 aa13.46□□□□□ -0.25
ACTN1-202ENST00000376839 HAPLN3Q96S86 360 aa13.46□□□□□ -0.25
ACTN1-202ENST00000376839 DRC3Q9H069 523 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms