RNA–Protein interactions for RNA: ENST00000376806.9

HLA-A-202, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,854 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-202ENST00000376806 SPOUT1Q5T280 376 aaKnown RBP17.15■□□□□ 0.34
HLA-A-202ENST00000376806 NAPEPLDQ6IQ20 393 aa17.15■□□□□ 0.34
HLA-A-202ENST00000376806 TFAP2DQ7Z6R9 452 aa17.15■□□□□ 0.34
HLA-A-202ENST00000376806 RASSF3Q86WH2 238 aa17.15■□□□□ 0.34
HLA-A-202ENST00000376806 ANKS4BQ8N8V4 417 aa17.15■□□□□ 0.34
HLA-A-202ENST00000376806 CDKL2Q92772 493 aa17.15■□□□□ 0.34
HLA-A-202ENST00000376806 FCRL5Q96RD9 977 aa17.15■□□□□ 0.34
HLA-A-202ENST00000376806 RC3H2Q9HBD1 1191 aaKnown RBP17.15■□□□□ 0.34
HLA-A-202ENST00000376806 GLOD4Q9HC38 313 aa17.15■□□□□ 0.34
HLA-A-202ENST00000376806 SLC17A6Q9P2U8 582 aa17.15■□□□□ 0.34
HLA-A-202ENST00000376806 AFF4Q9UHB7 1163 aaKnown RBP17.15■□□□□ 0.34
HLA-A-202ENST00000376806 RPS6KL1Q9Y6S9 549 aa17.15■□□□□ 0.34
HLA-A-202ENST00000376806 CCDC85CA6NKD9 419 aa17.14■□□□□ 0.33
HLA-A-202ENST00000376806 CNTN5O94779 1100 aa17.14■□□□□ 0.33
HLA-A-202ENST00000376806 SOD2P04179 222 aa17.14■□□□□ 0.33
HLA-A-202ENST00000376806 HLA-DQB2P05538 268 aa17.14■□□□□ 0.33
HLA-A-202ENST00000376806 CNTFP26441 200 aa17.14■□□□□ 0.33
HLA-A-202ENST00000376806 MGAT5Q09328 741 aa17.14■□□□□ 0.33
HLA-A-202ENST00000376806 SF3A3Q12874 501 aaKnown RBP eCLIP17.14■□□□□ 0.333e-13■■■□□ 18.9
HLA-A-202ENST00000376806 ALFQ53S48 1182 aa17.14■□□□□ 0.33
HLA-A-202ENST00000376806 FBXL22Q6P050 247 aa17.14■□□□□ 0.33
HLA-A-202ENST00000376806 LRRC8CQ8TDW0 803 aa17.14■□□□□ 0.33
HLA-A-202ENST00000376806 IGSF8Q969P0 613 aa17.14■□□□□ 0.33
HLA-A-202ENST00000376806 TOP1MTQ969P6 601 aa17.14■□□□□ 0.33
HLA-A-202ENST00000376806 ZNF669Q96BR6 464 aaPredicted RBP17.14■□□□□ 0.33
HLA-A-202ENST00000376806 ZNF689Q96CS4 500 aaPredicted RBP17.14■□□□□ 0.33
HLA-A-202ENST00000376806 CERS2Q96G23 380 aa17.14■□□□□ 0.33
HLA-A-202ENST00000376806 CDK5RAP1Q96SZ6 601 aaKnown RBP17.14■□□□□ 0.33
HLA-A-202ENST00000376806 APOL2Q9BQE5 337 aa17.14■□□□□ 0.33
HLA-A-202ENST00000376806 CLSTN3Q9BQT9 956 aa17.14■□□□□ 0.33
HLA-A-202ENST00000376806 HERC2P3Q9BVR0 1158 aa17.14■□□□□ 0.33
HLA-A-202ENST00000376806 DONSONQ9NYP3 566 aa17.14■□□□□ 0.33
HLA-A-202ENST00000376806 IPO11Q9UI26 975 aaKnown RBP17.14■□□□□ 0.33
HLA-A-202ENST00000376806 AAR2Q9Y312 384 aaKnown RBP17.14■□□□□ 0.33
HLA-A-202ENST00000376806 ABHD14A-ACY1A0A1B0GW23 586 aa17.14■□□□□ 0.33
HLA-A-202ENST00000376806 HMX2A2RU54 273 aa17.14■□□□□ 0.33
HLA-A-202ENST00000376806 RFPL1O75677 317 aa17.14■□□□□ 0.33
HLA-A-202ENST00000376806 NPY2RP49146 381 aa17.14■□□□□ 0.33
HLA-A-202ENST00000376806 KPNA1P52294 538 aaPredicted RBP17.14■□□□□ 0.33
HLA-A-202ENST00000376806 DEFB103AP81534 67 aa17.14■□□□□ 0.33
HLA-A-202ENST00000376806 CDH17Q12864 832 aa17.14■□□□□ 0.33
HLA-A-202ENST00000376806 ANO4Q32M45 955 aa17.14■□□□□ 0.33
HLA-A-202ENST00000376806 ACBD5Q5T8D3 534 aaPredicted RBP17.14■□□□□ 0.33
HLA-A-202ENST00000376806 CGB2Q6NT52 195 aa17.14■□□□□ 0.33
HLA-A-202ENST00000376806 ZNF449Q6P9G9 518 aa17.14■□□□□ 0.33
HLA-A-202ENST00000376806 CES3Q6UWW8 571 aa17.14■□□□□ 0.33
HLA-A-202ENST00000376806 PACS1Q6VY07 963 aa17.14■□□□□ 0.33
HLA-A-202ENST00000376806 LINC00523Q86TU6 105 aa17.14■□□□□ 0.33
HLA-A-202ENST00000376806 CHSY1Q86X52 802 aa17.14■□□□□ 0.33
HLA-A-202ENST00000376806 SLC39A11Q8N1S5 342 aa17.14■□□□□ 0.33
HLA-A-202ENST00000376806 PDZD8Q8NEN9 1154 aa17.14■□□□□ 0.33
HLA-A-202ENST00000376806 OVCA2Q8WZ82 227 aa17.14■□□□□ 0.33
HLA-A-202ENST00000376806 SPOCK2Q92563 424 aa17.14■□□□□ 0.33
HLA-A-202ENST00000376806 ZNF558Q96NG5 402 aa17.14■□□□□ 0.33
HLA-A-202ENST00000376806 PPP1R2P1Q96PQ5 205 aa17.14■□□□□ 0.33
HLA-A-202ENST00000376806 C12orf65Q9H3J6 166 aaKnown RBP17.14■□□□□ 0.33
HLA-A-202ENST00000376806 MKS1Q9NXB0 559 aa17.14■□□□□ 0.33
HLA-A-202ENST00000376806 HBS1LQ9Y450 684 aaKnown RBP17.14■□□□□ 0.33
HLA-A-202ENST00000376806 AP3B1O00203 1094 aa17.13■□□□□ 0.33
HLA-A-202ENST00000376806 COPEO14579 308 aa17.13■□□□□ 0.33
HLA-A-202ENST00000376806 ANXA9O76027 345 aa17.13■□□□□ 0.33
HLA-A-202ENST00000376806 USP1O94782 785 aa17.13■□□□□ 0.33
HLA-A-202ENST00000376806 SEC24AO95486 1093 aa17.13■□□□□ 0.33
HLA-A-202ENST00000376806 DNAJC3Q13217 504 aa17.13■□□□□ 0.33
HLA-A-202ENST00000376806 FRG1Q14331 258 aaKnown RBP17.13■□□□□ 0.33
HLA-A-202ENST00000376806 CERCAMQ5T4B2 595 aa17.13■□□□□ 0.33
HLA-A-202ENST00000376806 FAM47EQ6ZV65 393 aa17.13■□□□□ 0.33
HLA-A-202ENST00000376806 SPATA21Q7Z572 469 aa17.13■□□□□ 0.33
HLA-A-202ENST00000376806 TMCO2Q7Z6W1 182 aaPredicted RBP17.13■□□□□ 0.33
HLA-A-202ENST00000376806 TMEM135Q86UB9 458 aa17.13■□□□□ 0.33
HLA-A-202ENST00000376806 ZNF276Q8N554 614 aa17.13■□□□□ 0.33
HLA-A-202ENST00000376806 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.13■□□□□ 0.33
HLA-A-202ENST00000376806 SPATA22Q8NHS9 363 aa17.13■□□□□ 0.33
HLA-A-202ENST00000376806 HMCESQ96FZ2 354 aa17.13■□□□□ 0.33
HLA-A-202ENST00000376806 TMEM169Q96HH4 297 aa17.13■□□□□ 0.33
HLA-A-202ENST00000376806 FCRL3Q96P31 734 aaPredicted RBP17.13■□□□□ 0.33
HLA-A-202ENST00000376806 TBL1YQ9BQ87 522 aa17.13■□□□□ 0.33
HLA-A-202ENST00000376806 IL22Q9GZX6 179 aa17.13■□□□□ 0.33
HLA-A-202ENST00000376806 RBM22Q9NW64 420 aaKnown RBP eCLIP17.13■□□□□ 0.335e-6■■■■■ 31.7
HLA-A-202ENST00000376806 ZNF212Q9UDV6 495 aa17.13■□□□□ 0.33
HLA-A-202ENST00000376806 USP15Q9Y4E8 981 aaPredicted RBP17.13■□□□□ 0.33
HLA-A-202ENST00000376806 DRGXA6NNA5 263 aa17.12■□□□□ 0.33
HLA-A-202ENST00000376806 MT-CYBP00156 380 aaPredicted RBP17.12■□□□□ 0.33
HLA-A-202ENST00000376806 DHRS4L1P0CG22 281 aa17.12■□□□□ 0.33
HLA-A-202ENST00000376806 DNAJB2P25686 324 aa17.12■□□□□ 0.33
HLA-A-202ENST00000376806 ETV4P43268 484 aa17.12■□□□□ 0.33
HLA-A-202ENST00000376806 GEMP55040 296 aa17.12■□□□□ 0.33
HLA-A-202ENST00000376806 DSG1Q02413 1049 aa17.12■□□□□ 0.33
HLA-A-202ENST00000376806 MTA1Q13330 715 aa17.12■□□□□ 0.33
HLA-A-202ENST00000376806 RNF187Q5TA31 235 aaPredicted RBP17.12■□□□□ 0.33
HLA-A-202ENST00000376806 MROH9Q5TGP6 573 aa17.12■□□□□ 0.33
HLA-A-202ENST00000376806 NADSYN1Q6IA69 706 aa17.12■□□□□ 0.33
HLA-A-202ENST00000376806 FAM117BQ6P1L5 589 aa17.12■□□□□ 0.33
HLA-A-202ENST00000376806 CCDC121Q6ZUS5 278 aa17.12■□□□□ 0.33
HLA-A-202ENST00000376806 OTUD6BQ8N6M0 293 aa17.12■□□□□ 0.33
HLA-A-202ENST00000376806 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.12■□□□□ 0.33
HLA-A-202ENST00000376806 FATE1Q969F0 183 aa17.12■□□□□ 0.33
HLA-A-202ENST00000376806 RPRD1AQ96P16 312 aaPredicted RBP17.12■□□□□ 0.33
HLA-A-202ENST00000376806 SRPK1Q96SB4 655 aaKnown RBP17.12■□□□□ 0.33
HLA-A-202ENST00000376806 ZFATQ9P243 1243 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms