RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 ADH1BP00325 375 aa13.53□□□□□ -0.24
CLCN6-205ENST00000376492 FYNP06241 537 aa13.53□□□□□ -0.24
CLCN6-205ENST00000376492 SRPRAP08240 638 aaKnown RBP13.53□□□□□ -0.24
CLCN6-205ENST00000376492 ACP1P24666 158 aa13.53□□□□□ -0.24
CLCN6-205ENST00000376492 ECT2LQ008S8 904 aa13.53□□□□□ -0.24
CLCN6-205ENST00000376492 MYL5Q02045 173 aa13.53□□□□□ -0.24
CLCN6-205ENST00000376492 STILQ15468 1287 aa13.53□□□□□ -0.24
CLCN6-205ENST00000376492 POM121L1PQ3SYA9 428 aa13.53□□□□□ -0.24
CLCN6-205ENST00000376492 GJB7Q6PEY0 223 aa13.53□□□□□ -0.24
CLCN6-205ENST00000376492 GAS2L3Q86XJ1 694 aa13.53□□□□□ -0.24
CLCN6-205ENST00000376492 OXR1Q8N573 874 aa13.53□□□□□ -0.24
CLCN6-205ENST00000376492 MFSD2AQ8NA29 543 aa13.53□□□□□ -0.24
CLCN6-205ENST00000376492 IRGQQ8WZA9 623 aa13.53□□□□□ -0.24
CLCN6-205ENST00000376492 AZIN2Q96A70 460 aa13.53□□□□□ -0.24
CLCN6-205ENST00000376492 LGMNQ99538 433 aa13.53□□□□□ -0.24
CLCN6-205ENST00000376492 MIS12Q9H081 205 aa13.53□□□□□ -0.24
CLCN6-205ENST00000376492 SIX2Q9NPC8 291 aa13.53□□□□□ -0.24
CLCN6-205ENST00000376492 CYTH4Q9UIA0 394 aa13.53□□□□□ -0.24
CLCN6-205ENST00000376492 M0QYV0 167 aa13.52□□□□□ -0.25
CLCN6-205ENST00000376492 MT-CO3P00414 261 aa13.52□□□□□ -0.25
CLCN6-205ENST00000376492 BRD2P25440 801 aaKnown RBP13.52□□□□□ -0.25
CLCN6-205ENST00000376492 APBA1Q02410 837 aa13.52□□□□□ -0.25
CLCN6-205ENST00000376492 KCNMA1Q12791 1236 aa13.52□□□□□ -0.25
CLCN6-205ENST00000376492 ELAVL3Q14576 367 aaKnown RBP13.52□□□□□ -0.25
CLCN6-205ENST00000376492 NCAPHQ15003 741 aa13.52□□□□□ -0.25
CLCN6-205ENST00000376492 ANO6Q4KMQ2 910 aa13.52□□□□□ -0.25
CLCN6-205ENST00000376492 RNF219Q5W0B1 726 aaPredicted RBP13.52□□□□□ -0.25
CLCN6-205ENST00000376492 RAP1GAP2Q684P5 730 aa13.52□□□□□ -0.25
CLCN6-205ENST00000376492 TAC4Q86UU9 113 aa13.52□□□□□ -0.25
CLCN6-205ENST00000376492 CIR1Q86X95 450 aaPredicted RBP13.52□□□□□ -0.25
CLCN6-205ENST00000376492 LGI2Q8N0V4 545 aa13.52□□□□□ -0.25
CLCN6-205ENST00000376492 SLC25A45Q8N413 288 aa13.52□□□□□ -0.25
CLCN6-205ENST00000376492 SHC3Q92529 594 aa13.52□□□□□ -0.25
CLCN6-205ENST00000376492 SLC39A13Q96H72 371 aa13.52□□□□□ -0.25
CLCN6-205ENST00000376492 MYOCQ99972 504 aa13.52□□□□□ -0.25
CLCN6-205ENST00000376492 DDX50Q9BQ39 737 aaKnown RBP13.52□□□□□ -0.25
CLCN6-205ENST00000376492 CPNE5Q9HCH3 593 aa13.52□□□□□ -0.25
CLCN6-205ENST00000376492 UCKL1Q9NWZ5 548 aa13.52□□□□□ -0.25
CLCN6-205ENST00000376492 SARDHQ9UL12 918 aa13.52□□□□□ -0.25
CLCN6-205ENST00000376492 NAALADL1Q9UQQ1 740 aa13.52□□□□□ -0.25
CLCN6-205ENST00000376492 BECN2A8MW95 431 aa13.51□□□□□ -0.25
CLCN6-205ENST00000376492 PYCARD-AS1I3L0S3 204 aa13.51□□□□□ -0.25
CLCN6-205ENST00000376492 J3QKU1 62 aa13.51□□□□□ -0.25
CLCN6-205ENST00000376492 ERVH48-1M5A8F1 160 aa13.51□□□□□ -0.25
CLCN6-205ENST00000376492 PLRG1O43660 514 aaKnown RBP13.51□□□□□ -0.25
CLCN6-205ENST00000376492 MOCS3O95396 460 aa13.51□□□□□ -0.25
CLCN6-205ENST00000376492 MPOP05164 745 aa13.51□□□□□ -0.25
CLCN6-205ENST00000376492 MYF5P13349 255 aa13.51□□□□□ -0.25
CLCN6-205ENST00000376492 KRT5P13647 590 aa13.51□□□□□ -0.25
CLCN6-205ENST00000376492 ZNF18P17022 549 aa13.51□□□□□ -0.25
CLCN6-205ENST00000376492 TPM4P67936 248 aa13.51□□□□□ -0.25
CLCN6-205ENST00000376492 IQCB1Q15051 598 aa13.51□□□□□ -0.25
CLCN6-205ENST00000376492 KRT31Q15323 416 aa13.51□□□□□ -0.25
CLCN6-205ENST00000376492 TAF1BQ53T94 588 aaPredicted RBP13.51□□□□□ -0.25
CLCN6-205ENST00000376492 PRPF39Q86UA1 669 aaKnown RBP13.51□□□□□ -0.25
CLCN6-205ENST00000376492 CHSY1Q86X52 802 aa13.51□□□□□ -0.25
CLCN6-205ENST00000376492 CCDC117Q8IWD4 279 aaPredicted RBP13.51□□□□□ -0.25
CLCN6-205ENST00000376492 CACTIN-AS1Q8N1I8 211 aa13.51□□□□□ -0.25
CLCN6-205ENST00000376492 FRS2Q8WU20 508 aa13.51□□□□□ -0.25
CLCN6-205ENST00000376492 FAM131CQ96AQ9 280 aa13.51□□□□□ -0.25
CLCN6-205ENST00000376492 HIC2Q96JB3 615 aa13.51□□□□□ -0.25
CLCN6-205ENST00000376492 SERPINB11Q96P15 392 aa13.51□□□□□ -0.25
CLCN6-205ENST00000376492 SEMA4CQ9C0C4 833 aa13.51□□□□□ -0.25
CLCN6-205ENST00000376492 HSD3B7Q9H2F3 369 aa13.51□□□□□ -0.25
CLCN6-205ENST00000376492 GRPEL1Q9HAV7 217 aa13.51□□□□□ -0.25
CLCN6-205ENST00000376492 TAB2Q9NYJ8 693 aa13.51□□□□□ -0.25
CLCN6-205ENST00000376492 LIMA1Q9UHB6 759 aaKnown RBP13.51□□□□□ -0.25
CLCN6-205ENST00000376492 DNAJC12Q9UKB3 198 aa13.51□□□□□ -0.25
CLCN6-205ENST00000376492 TPX2Q9ULW0 747 aaKnown RBP13.51□□□□□ -0.25
CLCN6-205ENST00000376492 TLR6Q9Y2C9 796 aa13.51□□□□□ -0.25
CLCN6-205ENST00000376492 MYLKQ15746 1914 aa13.51□□□□□ -0.25
CLCN6-205ENST00000376492 FFAR2O15552 330 aa13.5□□□□□ -0.25
CLCN6-205ENST00000376492 PDGFRAP16234 1089 aa13.5□□□□□ -0.25
CLCN6-205ENST00000376492 PCBP4P57723 403 aaKnown RBP13.5□□□□□ -0.25
CLCN6-205ENST00000376492 DAB2P98082 770 aa13.5□□□□□ -0.25
CLCN6-205ENST00000376492 CNTN1Q12860 1018 aa13.5□□□□□ -0.25
CLCN6-205ENST00000376492 ZNF211Q13398 564 aaPredicted RBP13.5□□□□□ -0.25
CLCN6-205ENST00000376492 STAT4Q14765 748 aa13.5□□□□□ -0.25
CLCN6-205ENST00000376492 MEA1Q16626 185 aa13.5□□□□□ -0.25
CLCN6-205ENST00000376492 ARHGAP44Q17R89 818 aa13.5□□□□□ -0.25
CLCN6-205ENST00000376492 ZC3H12AQ5D1E8 599 aaKnown RBP13.5□□□□□ -0.25
CLCN6-205ENST00000376492 ARHGAP40Q5TG30 622 aa13.5□□□□□ -0.25
CLCN6-205ENST00000376492 KLHDC7AQ5VTJ3 777 aa13.5□□□□□ -0.25
CLCN6-205ENST00000376492 AGBL4Q5VU57 503 aa13.5□□□□□ -0.25
CLCN6-205ENST00000376492 TMC6Q7Z403 805 aa13.5□□□□□ -0.25
CLCN6-205ENST00000376492 IQCHQ86VS3 1027 aa13.5□□□□□ -0.25
CLCN6-205ENST00000376492 ZNF248Q8NDW4 579 aa13.5□□□□□ -0.25
CLCN6-205ENST00000376492 ZNF606Q8WXB4 792 aa13.5□□□□□ -0.25
CLCN6-205ENST00000376492 HSFY1Q96LI6 401 aa13.5□□□□□ -0.25
CLCN6-205ENST00000376492 SPAG5Q96R06 1193 aa13.5□□□□□ -0.25
CLCN6-205ENST00000376492 VPS16Q9H269 839 aa13.5□□□□□ -0.25
CLCN6-205ENST00000376492 ARID1BQ8NFD5 2236 aaPredicted RBP13.49□□□□□ -0.25
CLCN6-205ENST00000376492 A0A1B0GVM2 712 aa13.49□□□□□ -0.25
CLCN6-205ENST00000376492 GOLGA6L19H0YKK7 550 aa13.49□□□□□ -0.25
CLCN6-205ENST00000376492 FOXN3O00409 490 aaPredicted RBP13.49□□□□□ -0.25
CLCN6-205ENST00000376492 PES1O00541 588 aaKnown RBP13.49□□□□□ -0.25
CLCN6-205ENST00000376492 MED7O43513 233 aa13.49□□□□□ -0.25
CLCN6-205ENST00000376492 FBXO21O94952 628 aa13.49□□□□□ -0.25
CLCN6-205ENST00000376492 TPM2P07951 284 aa13.49□□□□□ -0.25
CLCN6-205ENST00000376492 PRLRP16471 622 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms