RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 DFFAO00273 331 aa11.35□□□□□ -0.59
PDPN-202ENST00000376057 PRAMEF11O60813 436 aa11.35□□□□□ -0.59
PDPN-202ENST00000376057 RAMP2O60895 175 aa11.35□□□□□ -0.59
PDPN-202ENST00000376057 CLASP2O75122 1294 aaKnown RBP11.35□□□□□ -0.59
PDPN-202ENST00000376057 C1QAP02745 245 aa11.35□□□□□ -0.59
PDPN-202ENST00000376057 PTPN2P17706 415 aa11.35□□□□□ -0.59
PDPN-202ENST00000376057 GCAP28676 217 aa11.35□□□□□ -0.59
PDPN-202ENST00000376057 GEMIN4P57678 1058 aaKnown RBP11.35□□□□□ -0.59
PDPN-202ENST00000376057 PPM1LQ5SGD2 360 aa11.35□□□□□ -0.59
PDPN-202ENST00000376057 ADGRD1Q6QNK2 874 aa11.35□□□□□ -0.59
PDPN-202ENST00000376057 C3orf62Q6ZUJ4 267 aa11.35□□□□□ -0.59
PDPN-202ENST00000376057 LGI2Q8N0V4 545 aa11.35□□□□□ -0.59
PDPN-202ENST00000376057 ARHGEF2Q92974 986 aaKnown RBP11.35□□□□□ -0.59
PDPN-202ENST00000376057 CENPTQ96BT3 561 aa11.35□□□□□ -0.59
PDPN-202ENST00000376057 CELF6Q96J87 481 aaKnown RBP11.35□□□□□ -0.59
PDPN-202ENST00000376057 GCNAQ96QF7 691 aa11.35□□□□□ -0.59
PDPN-202ENST00000376057 CYTH2Q99418 400 aa11.35□□□□□ -0.59
PDPN-202ENST00000376057 C17orf80Q9BSJ5 609 aa11.35□□□□□ -0.59
PDPN-202ENST00000376057 SLC25A51Q9H1U9 297 aa11.35□□□□□ -0.59
PDPN-202ENST00000376057 PDFQ9HBH1 243 aa11.35□□□□□ -0.59
PDPN-202ENST00000376057 SSU72Q9NP77 194 aaKnown RBP11.35□□□□□ -0.59
PDPN-202ENST00000376057 ASAH2Q9NR71 780 aa11.35□□□□□ -0.59
PDPN-202ENST00000376057 VPS45Q9NRW7 570 aa11.35□□□□□ -0.59
PDPN-202ENST00000376057 SENP1Q9P0U3 644 aa11.35□□□□□ -0.59
PDPN-202ENST00000376057 ZNF180Q9UJW8 692 aa11.35□□□□□ -0.59
PDPN-202ENST00000376057 ARHGAP26Q9UNA1 814 aa11.35□□□□□ -0.59
PDPN-202ENST00000376057 TRAV19A0A0A6YYK7 116 aa11.35□□□□□ -0.59
PDPN-202ENST00000376057 HIDE1A8MVS5 230 aa11.35□□□□□ -0.59
PDPN-202ENST00000376057 GOLGA8MH3BSY2 632 aa11.35□□□□□ -0.59
PDPN-202ENST00000376057 SYN1P17600 705 aa11.35□□□□□ -0.59
PDPN-202ENST00000376057 CES1P23141 567 aa11.35□□□□□ -0.59
PDPN-202ENST00000376057 GEMP55040 296 aa11.35□□□□□ -0.59
PDPN-202ENST00000376057 MPP3Q13368 585 aa11.35□□□□□ -0.59
PDPN-202ENST00000376057 POLD3Q15054 466 aaPredicted RBP11.35□□□□□ -0.59
PDPN-202ENST00000376057 BBS9Q3SYG4 887 aa11.35□□□□□ -0.59
PDPN-202ENST00000376057 NAPEPLDQ6IQ20 393 aa11.35□□□□□ -0.59
PDPN-202ENST00000376057 TAOK1Q7L7X3 1001 aa11.35□□□□□ -0.59
PDPN-202ENST00000376057 PTCD2Q8WV60 388 aaKnown RBP11.35□□□□□ -0.59
PDPN-202ENST00000376057 HMCESQ96FZ2 354 aa11.35□□□□□ -0.59
PDPN-202ENST00000376057 MLPHQ9BV36 600 aaPredicted RBP11.35□□□□□ -0.59
PDPN-202ENST00000376057 ACE2Q9BYF1 805 aaPredicted RBP11.35□□□□□ -0.59
PDPN-202ENST00000376057 ARNT2Q9HBZ2 717 aa11.35□□□□□ -0.59
PDPN-202ENST00000376057 ALG13Q9NP73 1137 aaKnown RBP11.35□□□□□ -0.59
PDPN-202ENST00000376057 PRDM4Q9UKN5 801 aa11.35□□□□□ -0.59
PDPN-202ENST00000376057 KDELR3O43731 214 aa11.34□□□□□ -0.59
PDPN-202ENST00000376057 JCHAINP01591 159 aa11.34□□□□□ -0.59
PDPN-202ENST00000376057 HMBSP08397 361 aa11.34□□□□□ -0.59
PDPN-202ENST00000376057 MBL2P11226 248 aaPredicted RBP11.34□□□□□ -0.59
PDPN-202ENST00000376057 HDCP19113 662 aa11.34□□□□□ -0.59
PDPN-202ENST00000376057 NR1D1P20393 614 aa11.34□□□□□ -0.59
PDPN-202ENST00000376057 OR1E1P30953 314 aa11.34□□□□□ -0.59
PDPN-202ENST00000376057 ADRA1AP35348 466 aa11.34□□□□□ -0.59
PDPN-202ENST00000376057 IRAK1P51617 712 aa11.34□□□□□ -0.59
PDPN-202ENST00000376057 ARHGAP36Q6ZRI8 547 aa11.34□□□□□ -0.59
PDPN-202ENST00000376057 DENND1CQ8IV53 801 aa11.34□□□□□ -0.59
PDPN-202ENST00000376057 IGDCC3Q8IVU1 814 aa11.34□□□□□ -0.59
PDPN-202ENST00000376057 PDCD7Q8N8D1 485 aaKnown RBP11.34□□□□□ -0.59
PDPN-202ENST00000376057 EPS8L3Q8TE67 593 aaKnown RBP11.34□□□□□ -0.59
PDPN-202ENST00000376057 TTC17Q96AE7 1141 aa11.34□□□□□ -0.59
PDPN-202ENST00000376057 PRICKLE1Q96MT3 831 aaPredicted RBP11.34□□□□□ -0.59
PDPN-202ENST00000376057 MRM3Q9HC36 420 aaKnown RBP11.34□□□□□ -0.59
PDPN-202ENST00000376057 ATP13A1Q9HD20 1204 aa11.34□□□□□ -0.59
PDPN-202ENST00000376057 MOCS1Q9NZB8 636 aa11.34□□□□□ -0.59
PDPN-202ENST00000376057 SEPT10Q9P0V9 454 aa11.34□□□□□ -0.59
PDPN-202ENST00000376057 NR2E3Q9Y5X4 410 aa11.34□□□□□ -0.59
PDPN-202ENST00000376057 GOLGA6L7A0A1B0GV03 622 aa11.34□□□□□ -0.59
PDPN-202ENST00000376057 PGAM1P18669 254 aa11.34□□□□□ -0.59
PDPN-202ENST00000376057 NFKB1P19838 968 aa11.34□□□□□ -0.59
PDPN-202ENST00000376057 GABRR2P28476 465 aa11.34□□□□□ -0.59
PDPN-202ENST00000376057 LMAN1P49257 510 aa11.34□□□□□ -0.59
PDPN-202ENST00000376057 OXCT1P55809 520 aa11.34□□□□□ -0.59
PDPN-202ENST00000376057 PPP2R2AP63151 447 aa11.34□□□□□ -0.59
PDPN-202ENST00000376057 TERF2Q15554 542 aa11.34□□□□□ -0.59
PDPN-202ENST00000376057 GSDMBQ8TAX9 411 aa11.34□□□□□ -0.59
PDPN-202ENST00000376057 LRRN4Q8WUT4 740 aa11.34□□□□□ -0.59
PDPN-202ENST00000376057 NSMCE1Q8WV22 266 aa11.34□□□□□ -0.59
PDPN-202ENST00000376057 IMP4Q96G21 291 aaKnown RBP11.34□□□□□ -0.59
PDPN-202ENST00000376057 VPS37BQ9H9H4 285 aa11.34□□□□□ -0.59
PDPN-202ENST00000376057 PLAC1Q9HBJ0 212 aa11.34□□□□□ -0.59
PDPN-202ENST00000376057 DNAJC17Q9NVM6 304 aaKnown RBP11.34□□□□□ -0.59
PDPN-202ENST00000376057 ZC3H7BQ9UGR2 993 aaKnown RBP11.34□□□□□ -0.59
PDPN-202ENST00000376057 LSM7Q9UK45 103 aaKnown RBP11.34□□□□□ -0.59
PDPN-202ENST00000376057 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.34□□□□□ -0.59
PDPN-202ENST00000376057 ZFP37Q9Y6Q3 630 aaPredicted RBP11.34□□□□□ -0.59
PDPN-202ENST00000376057 EXOC1LA0A1B0GW35 172 aa11.33□□□□□ -0.6
PDPN-202ENST00000376057 E2F8A0AVK6 867 aa11.33□□□□□ -0.6
PDPN-202ENST00000376057 POLR3GO15318 223 aaPredicted RBP11.33□□□□□ -0.6
PDPN-202ENST00000376057 XYLBO75191 536 aa11.33□□□□□ -0.6
PDPN-202ENST00000376057 SMAD3P84022 425 aaKnown RBP11.33□□□□□ -0.6
PDPN-202ENST00000376057 GNA12Q03113 381 aa11.33□□□□□ -0.6
PDPN-202ENST00000376057 FAXCQ5TGI0 409 aa11.33□□□□□ -0.6
PDPN-202ENST00000376057 PLPP4Q5VZY2 271 aa11.33□□□□□ -0.6
PDPN-202ENST00000376057 CCDC33Q8N5R6 958 aa11.33□□□□□ -0.6
PDPN-202ENST00000376057 HJURPQ8NCD3 748 aaPredicted RBP11.33□□□□□ -0.6
PDPN-202ENST00000376057 ARNTL2Q8WYA1 636 aa11.33□□□□□ -0.6
PDPN-202ENST00000376057 MYEOVQ96EZ4 313 aa11.33□□□□□ -0.6
PDPN-202ENST00000376057 STAMBPL1Q96FJ0 436 aa11.33□□□□□ -0.6
PDPN-202ENST00000376057 PSMC3IPQ9P2W1 217 aaPredicted RBP11.33□□□□□ -0.6
PDPN-202ENST00000376057 NOVA2Q9UNW9 492 aaKnown RBP11.33□□□□□ -0.6
PDPN-202ENST00000376057 TTLL3Q9Y4R7 772 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms