RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 GARSP41250 739 aaKnown RBP14.27□□□□□ -0.13
MSH5-202ENST00000375740 ZBTB17Q13105 803 aa14.27□□□□□ -0.13
MSH5-202ENST00000375740 SCML4Q8N228 414 aa14.27□□□□□ -0.13
MSH5-202ENST00000375740 PPFIBP2Q8ND30 876 aa14.27□□□□□ -0.13
MSH5-202ENST00000375740 HDAC11Q96DB2 347 aa14.27□□□□□ -0.13
MSH5-202ENST00000375740 CELF6Q96J87 481 aaKnown RBP14.27□□□□□ -0.13
MSH5-202ENST00000375740 SUSD3Q96L08 255 aa14.27□□□□□ -0.13
MSH5-202ENST00000375740 FCRL3Q96P31 734 aaPredicted RBP14.27□□□□□ -0.13
MSH5-202ENST00000375740 FAM192AQ9GZU8 254 aa14.27□□□□□ -0.13
MSH5-202ENST00000375740 BRD8Q9H0E9 1235 aa14.27□□□□□ -0.13
MSH5-202ENST00000375740 KCNK13Q9HB14 408 aa14.27□□□□□ -0.13
MSH5-202ENST00000375740 RNF186Q9NXI6 227 aa14.27□□□□□ -0.13
MSH5-202ENST00000375740 ATXN10Q9UBB4 475 aa14.27□□□□□ -0.13
MSH5-202ENST00000375740 RPL26L1Q9UNX3 145 aaKnown RBP14.27□□□□□ -0.13
MSH5-202ENST00000375740 PSAT1Q9Y617 370 aa14.27□□□□□ -0.13
MSH5-202ENST00000375740 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.27□□□□□ -0.13
MSH5-202ENST00000375740 KLF11O14901 512 aa14.26□□□□□ -0.13
MSH5-202ENST00000375740 AP2A1O95782 977 aa14.26□□□□□ -0.13
MSH5-202ENST00000375740 TOP3BO95985 862 aaKnown RBP14.26□□□□□ -0.13
MSH5-202ENST00000375740 POLBP06746 335 aa14.26□□□□□ -0.13
MSH5-202ENST00000375740 ERVK-10P10266 1014 aa14.26□□□□□ -0.13
MSH5-202ENST00000375740 RTN4RL1Q86UN2 441 aaPredicted RBP14.26□□□□□ -0.13
MSH5-202ENST00000375740 PCSK9Q8NBP7 692 aaKnown RBP14.26□□□□□ -0.13
MSH5-202ENST00000375740 FBXO27Q8NI29 283 aa14.26□□□□□ -0.13
MSH5-202ENST00000375740 NCSTNQ92542 709 aa14.26□□□□□ -0.13
MSH5-202ENST00000375740 SIK2Q9H0K1 926 aa14.26□□□□□ -0.13
MSH5-202ENST00000375740 SHROOM3Q8TF72 1996 aa14.26□□□□□ -0.13
MSH5-202ENST00000375740 RNASEH1O60930 286 aaKnown RBP14.26□□□□□ -0.13
MSH5-202ENST00000375740 USP1O94782 785 aa14.26□□□□□ -0.13
MSH5-202ENST00000375740 TGDSO95455 350 aa14.26□□□□□ -0.13
MSH5-202ENST00000375740 CST5P28325 142 aaPredicted RBP14.26□□□□□ -0.13
MSH5-202ENST00000375740 PGFP49763 221 aa14.26□□□□□ -0.13
MSH5-202ENST00000375740 ZNF135P52742 658 aaPredicted RBP14.26□□□□□ -0.13
MSH5-202ENST00000375740 ARFIP2P53365 341 aa14.26□□□□□ -0.13
MSH5-202ENST00000375740 USP46P62068 366 aa14.26□□□□□ -0.13
MSH5-202ENST00000375740 TSPY1Q01534 308 aa14.26□□□□□ -0.13
MSH5-202ENST00000375740 MAPRE1Q15691 268 aaKnown RBP14.26□□□□□ -0.13
MSH5-202ENST00000375740 LIN52Q52LA3 116 aa14.26□□□□□ -0.13
MSH5-202ENST00000375740 TEX44Q53QW1 395 aa14.26□□□□□ -0.13
MSH5-202ENST00000375740 RWDD4Q6NW29 188 aaKnown RBP14.26□□□□□ -0.13
MSH5-202ENST00000375740 IZUMO2Q6UXV1 221 aa14.26□□□□□ -0.13
MSH5-202ENST00000375740 NUDCD3Q8IVD9 361 aa14.26□□□□□ -0.13
MSH5-202ENST00000375740 STKLD1Q8NE28 680 aa14.26□□□□□ -0.13
MSH5-202ENST00000375740 MCUR1Q96AQ8 359 aa14.26□□□□□ -0.13
MSH5-202ENST00000375740 E2F7Q96AV8 911 aa14.26□□□□□ -0.13
MSH5-202ENST00000375740 MLPHQ9BV36 600 aaPredicted RBP14.26□□□□□ -0.13
MSH5-202ENST00000375740 OSBPL2Q9H1P3 480 aa14.26□□□□□ -0.13
MSH5-202ENST00000375740 SAR1AQ9NR31 198 aa14.26□□□□□ -0.13
MSH5-202ENST00000375740 MTSS1O43312 755 aa14.25□□□□□ -0.13
MSH5-202ENST00000375740 B4GALT3O60512 393 aa14.25□□□□□ -0.13
MSH5-202ENST00000375740 COQ9O75208 318 aa14.25□□□□□ -0.13
MSH5-202ENST00000375740 ZNF189O75820 626 aaPredicted RBP14.25□□□□□ -0.13
MSH5-202ENST00000375740 OR4Q2P0C623 313 aa14.25□□□□□ -0.13
MSH5-202ENST00000375740 NFKB1P19838 968 aa14.25□□□□□ -0.13
MSH5-202ENST00000375740 SERPINB3P29508 390 aa14.25□□□□□ -0.13
MSH5-202ENST00000375740 SERPINB6P35237 376 aa14.25□□□□□ -0.13
MSH5-202ENST00000375740 GRIK1P39086 918 aa14.25□□□□□ -0.13
MSH5-202ENST00000375740 CES4AQ5XG92 561 aa14.25□□□□□ -0.13
MSH5-202ENST00000375740 KCTD11Q693B1 232 aa14.25□□□□□ -0.13
MSH5-202ENST00000375740 ZNF280BQ86YH2 543 aa14.25□□□□□ -0.13
MSH5-202ENST00000375740 SPATA2LQ8IUW3 424 aaPredicted RBP14.25□□□□□ -0.13
MSH5-202ENST00000375740 DNAAF3Q8N9W5 541 aa14.25□□□□□ -0.13
MSH5-202ENST00000375740 GBA3Q9H227 469 aa14.25□□□□□ -0.13
MSH5-202ENST00000375740 TMEM165Q9HC07 324 aa14.25□□□□□ -0.13
MSH5-202ENST00000375740 SFMBT1Q9UHJ3 866 aa14.25□□□□□ -0.13
MSH5-202ENST00000375740 TRHDEQ9UKU6 1024 aa14.25□□□□□ -0.13
MSH5-202ENST00000375740 NLRC5Q86WI3 1866 aa14.25□□□□□ -0.13
MSH5-202ENST00000375740 DDHD2O94830 711 aa14.25□□□□□ -0.13
MSH5-202ENST00000375740 IL1BP01584 269 aa14.25□□□□□ -0.13
MSH5-202ENST00000375740 JCHAINP01591 159 aa14.25□□□□□ -0.13
MSH5-202ENST00000375740 IGLV3-25P01717 112 aa14.25□□□□□ -0.13
MSH5-202ENST00000375740 ALDOAP04075 364 aaKnown RBP14.25□□□□□ -0.13
MSH5-202ENST00000375740 DLDP09622 509 aaKnown RBP14.25□□□□□ -0.13
MSH5-202ENST00000375740 PAX3P23760 479 aa14.25□□□□□ -0.13
MSH5-202ENST00000375740 GRIA2P42262 883 aa14.25□□□□□ -0.13
MSH5-202ENST00000375740 TMPRSS15P98073 1019 aa14.25□□□□□ -0.13
MSH5-202ENST00000375740 BST1Q10588 318 aa14.25□□□□□ -0.13
MSH5-202ENST00000375740 LSAMPQ13449 338 aa14.25□□□□□ -0.13
MSH5-202ENST00000375740 EIF4EBP2Q13542 120 aaPredicted RBP14.25□□□□□ -0.13
MSH5-202ENST00000375740 CHI3L2Q15782 390 aa14.25□□□□□ -0.13
MSH5-202ENST00000375740 SPANXN3Q5MJ09 141 aa14.25□□□□□ -0.13
MSH5-202ENST00000375740 BTBD8Q5XKL5 378 aa14.25□□□□□ -0.13
MSH5-202ENST00000375740 RASSF3Q86WH2 238 aa14.25□□□□□ -0.13
MSH5-202ENST00000375740 TRIM42Q8IWZ5 723 aa14.25□□□□□ -0.13
MSH5-202ENST00000375740 STMN2Q93045 179 aa14.25□□□□□ -0.13
MSH5-202ENST00000375740 CLPTM1LQ96KA5 538 aa14.25□□□□□ -0.13
MSH5-202ENST00000375740 TMEM120AQ9BXJ8 343 aa14.25□□□□□ -0.13
MSH5-202ENST00000375740 ZNF395Q9H8N7 513 aaPredicted RBP14.25□□□□□ -0.13
MSH5-202ENST00000375740 CASS4Q9NQ75 786 aa14.25□□□□□ -0.13
MSH5-202ENST00000375740 BFARQ9NZS9 450 aa14.25□□□□□ -0.13
MSH5-202ENST00000375740 SIRPGQ9P1W8 387 aa14.25□□□□□ -0.13
MSH5-202ENST00000375740 ARMCX1Q9P291 453 aa14.25□□□□□ -0.13
MSH5-202ENST00000375740 VANGL2Q9ULK5 521 aa14.25□□□□□ -0.13
MSH5-202ENST00000375740 CCDC195A0A1B0GUA6 201 aa14.24□□□□□ -0.13
MSH5-202ENST00000375740 TPP1O14773 563 aa14.24□□□□□ -0.13
MSH5-202ENST00000375740 HNRNPRO43390 633 aaKnown RBP14.24□□□□□ -0.13
MSH5-202ENST00000375740 HAUS5O94927 633 aa14.24□□□□□ -0.13
MSH5-202ENST00000375740 OR6B1O95007 311 aa14.24□□□□□ -0.13
MSH5-202ENST00000375740 TYMPP19971 482 aa14.24□□□□□ -0.13
MSH5-202ENST00000375740 SLC5A3P53794 718 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms