RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 ZNF571Q7Z3V5 609 aaPredicted RBP5.11□□□□□ -1.59
USP48-202ENST00000374730 IRF2BP2Q7Z5L9 587 aa5.11□□□□□ -1.59
USP48-202ENST00000374730 VPS36Q86VN1 386 aa5.11□□□□□ -1.59
USP48-202ENST00000374730 C12orf56Q8IXR9 622 aa5.11□□□□□ -1.59
USP48-202ENST00000374730 FAM186BQ8IYM0 893 aa5.11□□□□□ -1.59
USP48-202ENST00000374730 MYCT1Q8N699 235 aa5.11□□□□□ -1.59
USP48-202ENST00000374730 FAM133AQ8N9E0 248 aa5.11□□□□□ -1.59
USP48-202ENST00000374730 INPP4AQ96PE3 977 aaPredicted RBP5.11□□□□□ -1.59
USP48-202ENST00000374730 SPAG5Q96R06 1193 aa5.11□□□□□ -1.59
USP48-202ENST00000374730 ZSWIM1Q9BR11 485 aa5.11□□□□□ -1.59
USP48-202ENST00000374730 LXNQ9BS40 222 aa5.11□□□□□ -1.59
USP48-202ENST00000374730 ZNF577Q9BSK1 485 aa5.11□□□□□ -1.59
USP48-202ENST00000374730 CRACR2AQ9BSW2 395 aa5.11□□□□□ -1.59
USP48-202ENST00000374730 TIPINQ9BVW5 301 aa5.11□□□□□ -1.59
USP48-202ENST00000374730 TMEM39BQ9GZU3 492 aa5.11□□□□□ -1.59
USP48-202ENST00000374730 ST6GALNAC4Q9H4F1 302 aa5.11□□□□□ -1.59
USP48-202ENST00000374730 VEZTQ9HBM0 779 aa5.11□□□□□ -1.59
USP48-202ENST00000374730 GALNT9Q9HCQ5 603 aa5.11□□□□□ -1.59
USP48-202ENST00000374730 PDE11AQ9HCR9 933 aa5.11□□□□□ -1.59
USP48-202ENST00000374730 FBXO34Q9NWN3 711 aa5.11□□□□□ -1.59
USP48-202ENST00000374730 GCNT4Q9P109 453 aa5.11□□□□□ -1.59
USP48-202ENST00000374730 CCPG1Q9ULG6 757 aa5.11□□□□□ -1.59
USP48-202ENST00000374730 HPCAL4Q9UM19 191 aa5.11□□□□□ -1.59
USP48-202ENST00000374730 UBIAD1Q9Y5Z9 338 aa5.11□□□□□ -1.59
USP48-202ENST00000374730 A0A0G2JMZ2 1700 aa5.11□□□□□ -1.59
USP48-202ENST00000374730 DOCK5Q9H7D0 1870 aa5.11□□□□□ -1.59
USP48-202ENST00000374730 PTPRFP10586 1907 aa5.11□□□□□ -1.59
USP48-202ENST00000374730 DICER1Q9UPY3 1922 aaKnown RBP5.11□□□□□ -1.59
USP48-202ENST00000374730 ARHGEF35A5YM69 484 aa5.1□□□□□ -1.59
USP48-202ENST00000374730 LRRIQ3A6PVS8 624 aaPredicted RBP5.1□□□□□ -1.59
USP48-202ENST00000374730 F8VZ95 297 aa5.1□□□□□ -1.59
USP48-202ENST00000374730 IPO5O00410 1097 aaKnown RBP5.1□□□□□ -1.59
USP48-202ENST00000374730 CLIC2O15247 247 aa5.1□□□□□ -1.59
USP48-202ENST00000374730 MAPK13O15264 365 aa5.1□□□□□ -1.59
USP48-202ENST00000374730 POLR3GO15318 223 aaPredicted RBP5.1□□□□□ -1.59
USP48-202ENST00000374730 P4HA2O15460 535 aa5.1□□□□□ -1.59
USP48-202ENST00000374730 CHMP2AO43633 222 aa5.1□□□□□ -1.59
USP48-202ENST00000374730 NCK2O43639 380 aa5.1□□□□□ -1.59
USP48-202ENST00000374730 BUB1O43683 1085 aa5.1□□□□□ -1.59
USP48-202ENST00000374730 N4BP1O75113 896 aaKnown RBP5.1□□□□□ -1.59
USP48-202ENST00000374730 PALMO75781 387 aa5.1□□□□□ -1.59
USP48-202ENST00000374730 GPANK1O95872 356 aa5.1□□□□□ -1.59
USP48-202ENST00000374730 ARP10275 920 aa5.1□□□□□ -1.59
USP48-202ENST00000374730 ACTN1P12814 892 aa5.1□□□□□ -1.59
USP48-202ENST00000374730 DPEP1P16444 411 aa5.1□□□□□ -1.59
USP48-202ENST00000374730 DDCP20711 480 aa5.1□□□□□ -1.59
USP48-202ENST00000374730 SLC6A2P23975 617 aa5.1□□□□□ -1.59
USP48-202ENST00000374730 RPS12P25398 132 aaKnown RBP5.1□□□□□ -1.59
USP48-202ENST00000374730 NMT1P30419 496 aaKnown RBP5.1□□□□□ -1.59
USP48-202ENST00000374730 STAT1P42224 750 aa5.1□□□□□ -1.59
USP48-202ENST00000374730 FMO5P49326 533 aa5.1□□□□□ -1.59
USP48-202ENST00000374730 ZNF280AP59817 542 aaPredicted RBP5.1□□□□□ -1.59
USP48-202ENST00000374730 CXCL9Q07325 125 aa5.1□□□□□ -1.59
USP48-202ENST00000374730 TNFAIP1Q13829 316 aa5.1□□□□□ -1.59
USP48-202ENST00000374730 GOLGB1Q14789 3259 aaKnown RBP5.1□□□□□ -1.59
USP48-202ENST00000374730 KIAA0753Q2KHM9 967 aa5.1□□□□□ -1.59
USP48-202ENST00000374730 INAVAQ3KP66 663 aa5.1□□□□□ -1.59
USP48-202ENST00000374730 HSP90B2PQ58FF3 399 aa5.1□□□□□ -1.59
USP48-202ENST00000374730 C8orf74Q6P047 294 aa5.1□□□□□ -1.59
USP48-202ENST00000374730 MIER3Q7Z3K6 550 aa5.1□□□□□ -1.59
USP48-202ENST00000374730 SLFN11Q7Z7L1 901 aa5.1□□□□□ -1.59
USP48-202ENST00000374730 GPR149Q86SP6 731 aa5.1□□□□□ -1.59
USP48-202ENST00000374730 TPH2Q8IWU9 490 aa5.1□□□□□ -1.59
USP48-202ENST00000374730 DAW1Q8N136 415 aa5.1□□□□□ -1.59
USP48-202ENST00000374730 FITM2Q8N6M3 262 aa5.1□□□□□ -1.59
USP48-202ENST00000374730 CNTD1Q8N815 330 aa5.1□□□□□ -1.59
USP48-202ENST00000374730 LRRC57Q8N9N7 239 aa5.1□□□□□ -1.59
USP48-202ENST00000374730 SLC17A8Q8NDX2 589 aa5.1□□□□□ -1.59
USP48-202ENST00000374730 RDM1Q8NG50 284 aa5.1□□□□□ -1.59
USP48-202ENST00000374730 OLIG1Q8TAK6 271 aa5.1□□□□□ -1.59
USP48-202ENST00000374730 CCHCR1Q8TD31 782 aa5.1□□□□□ -1.59
USP48-202ENST00000374730 PIGOQ8TEQ8 1089 aa5.1□□□□□ -1.59
USP48-202ENST00000374730 HOOK2Q96ED9 719 aa5.1□□□□□ -1.59
USP48-202ENST00000374730 RNF31Q96EP0 1072 aa5.1□□□□□ -1.59
USP48-202ENST00000374730 PBKQ96KB5 322 aa5.1□□□□□ -1.59
USP48-202ENST00000374730 MYOCQ99972 504 aa5.1□□□□□ -1.59
USP48-202ENST00000374730 SYT11Q9BT88 431 aa5.1□□□□□ -1.59
USP48-202ENST00000374730 SELENOOQ9BVL4 669 aa5.1□□□□□ -1.59
USP48-202ENST00000374730 PAPPA2Q9BXP8 1791 aa5.1□□□□□ -1.59
USP48-202ENST00000374730 STK33Q9BYT3 514 aa5.1□□□□□ -1.59
USP48-202ENST00000374730 GLIS2Q9BZE0 524 aaPredicted RBP5.1□□□□□ -1.59
USP48-202ENST00000374730 MAF1Q9H063 256 aa5.1□□□□□ -1.59
USP48-202ENST00000374730 TMEM206Q9H813 350 aa5.1□□□□□ -1.59
USP48-202ENST00000374730 SLC38A10Q9HBR0 1119 aa5.1□□□□□ -1.59
USP48-202ENST00000374730 AGO4Q9HCK5 861 aaKnown RBP5.1□□□□□ -1.59
USP48-202ENST00000374730 AGPAT3Q9NRZ7 376 aa5.1□□□□□ -1.59
USP48-202ENST00000374730 FBXO28Q9NVF7 368 aa5.1□□□□□ -1.59
USP48-202ENST00000374730 SLC5A4Q9NY91 659 aa5.1□□□□□ -1.59
USP48-202ENST00000374730 COL20A1Q9P218 1284 aa5.1□□□□□ -1.59
USP48-202ENST00000374730 WRAP73Q9P2S5 460 aaPredicted RBP5.1□□□□□ -1.59
USP48-202ENST00000374730 LRRC37A2A6NM11 1700 aa5.09□□□□□ -1.59
USP48-202ENST00000374730 A0A0U1RQG5 324 aaPredicted RBP5.09□□□□□ -1.59
USP48-202ENST00000374730 K7ENM7 598 aa5.09□□□□□ -1.59
USP48-202ENST00000374730 KIAA0355O15063 1070 aa5.09□□□□□ -1.59
USP48-202ENST00000374730 PMM2O15305 246 aa5.09□□□□□ -1.59
USP48-202ENST00000374730 RPS6KA5O75582 802 aa5.09□□□□□ -1.59
USP48-202ENST00000374730 SYF2O95926 243 aaKnown RBP5.09□□□□□ -1.59
USP48-202ENST00000374730 H2AFZP0C0S5 128 aa5.09□□□□□ -1.59
USP48-202ENST00000374730 CCDC172P0C7W6 258 aa5.09□□□□□ -1.59
USP48-202ENST00000374730 MYBL2P10244 700 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms