RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 ACSL4O60488 711 aa17.23■□□□□ 0.35
PTPN20-203ENST00000374342 UGT1A9O60656 530 aa17.23■□□□□ 0.35
PTPN20-203ENST00000374342 CA4P22748 312 aa17.23■□□□□ 0.35
PTPN20-203ENST00000374342 SLC6A4P31645 630 aa17.23■□□□□ 0.35
PTPN20-203ENST00000374342 HARS2P49590 506 aaKnown RBP17.23■□□□□ 0.35
PTPN20-203ENST00000374342 MTA1Q13330 715 aa17.23■□□□□ 0.35
PTPN20-203ENST00000374342 PPIGQ13427 754 aaKnown RBP eCLIP17.23■□□□□ 0.35
PTPN20-203ENST00000374342 SMAD1Q15797 465 aaKnown RBP17.23■□□□□ 0.35
PTPN20-203ENST00000374342 DENND4CQ5VZ89 1909 aa17.23■□□□□ 0.35
PTPN20-203ENST00000374342 NAPEPLDQ6IQ20 393 aa17.23■□□□□ 0.35
PTPN20-203ENST00000374342 RFWD3Q6PCD5 774 aa17.23■□□□□ 0.35
PTPN20-203ENST00000374342 KLHDC10Q6PID8 442 aa17.23■□□□□ 0.35
PTPN20-203ENST00000374342 CCNJLQ8IV13 435 aa17.23■□□□□ 0.35
PTPN20-203ENST00000374342 TCEAL8Q8IYN2 117 aa17.23■□□□□ 0.35
PTPN20-203ENST00000374342 BADQ92934 168 aa17.23■□□□□ 0.35
PTPN20-203ENST00000374342 PLD4Q96BZ4 506 aa17.23■□□□□ 0.35
PTPN20-203ENST00000374342 KLF6Q99612 283 aaPredicted RBP17.23■□□□□ 0.35
PTPN20-203ENST00000374342 NAT9Q9BTE0 207 aa17.23■□□□□ 0.35
PTPN20-203ENST00000374342 ZBED2Q9BTP6 218 aa17.23■□□□□ 0.35
PTPN20-203ENST00000374342 CCDC134Q9H6E4 229 aa17.23■□□□□ 0.35
PTPN20-203ENST00000374342 UGT1A7Q9HAW7 530 aa17.23■□□□□ 0.35
PTPN20-203ENST00000374342 UGT1A10Q9HAW8 530 aa17.23■□□□□ 0.35
PTPN20-203ENST00000374342 UGT1A8Q9HAW9 530 aa17.23■□□□□ 0.35
PTPN20-203ENST00000374342 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.23■□□□□ 0.35
PTPN20-203ENST00000374342 BFARQ9NZS9 450 aa17.23■□□□□ 0.35
PTPN20-203ENST00000374342 ZNF212Q9UDV6 495 aa17.23■□□□□ 0.35
PTPN20-203ENST00000374342 PRKAG2Q9UGJ0 569 aa17.23■□□□□ 0.35
PTPN20-203ENST00000374342 CHD5Q8TDI0 1954 aa17.22■□□□□ 0.35
PTPN20-203ENST00000374342 GOLGA8RI6L899 631 aa17.22■□□□□ 0.35
PTPN20-203ENST00000374342 RAMP2O60895 175 aa17.22■□□□□ 0.35
PTPN20-203ENST00000374342 FGBP02675 491 aa17.22■□□□□ 0.35
PTPN20-203ENST00000374342 SPATA31D3P0C874 917 aa17.22■□□□□ 0.35
PTPN20-203ENST00000374342 SLC11A2P49281 568 aa17.22■□□□□ 0.35
PTPN20-203ENST00000374342 EPHB3P54753 998 aa17.22■□□□□ 0.35
PTPN20-203ENST00000374342 CREMQ03060 361 aa17.22■□□□□ 0.35
PTPN20-203ENST00000374342 TTC39BQ5VTQ0 682 aaPredicted RBP17.22■□□□□ 0.35
PTPN20-203ENST00000374342 CES3Q6UWW8 571 aa17.22■□□□□ 0.35
PTPN20-203ENST00000374342 SPATA31D4Q6ZUB0 917 aa17.22■□□□□ 0.35
PTPN20-203ENST00000374342 DENND1CQ8IV53 801 aa17.22■□□□□ 0.35
PTPN20-203ENST00000374342 CFAP52Q8N1V2 620 aa17.22■□□□□ 0.35
PTPN20-203ENST00000374342 IPMKQ8NFU5 416 aa17.22■□□□□ 0.35
PTPN20-203ENST00000374342 FCRL5Q96RD9 977 aa17.22■□□□□ 0.35
PTPN20-203ENST00000374342 J3KR12 359 aa17.21■□□□□ 0.35
PTPN20-203ENST00000374342 PSMD3O43242 534 aa17.21■□□□□ 0.35
PTPN20-203ENST00000374342 ANXA9O76027 345 aa17.21■□□□□ 0.35
PTPN20-203ENST00000374342 CSPG5O95196 566 aa17.21■□□□□ 0.35
PTPN20-203ENST00000374342 MT-CYBP00156 380 aaPredicted RBP17.21■□□□□ 0.35
PTPN20-203ENST00000374342 MT-ND3P03897 115 aa17.21■□□□□ 0.35
PTPN20-203ENST00000374342 MAPKAPK2P49137 400 aa17.21■□□□□ 0.35
PTPN20-203ENST00000374342 HNRNPH2P55795 449 aaKnown RBP17.21■□□□□ 0.35
PTPN20-203ENST00000374342 HTRA4P83105 476 aaPredicted RBP17.21■□□□□ 0.35
PTPN20-203ENST00000374342 FPGSQ05932 587 aa17.21■□□□□ 0.35
PTPN20-203ENST00000374342 POLD3Q15054 466 aaPredicted RBP17.21■□□□□ 0.35
PTPN20-203ENST00000374342 QPCTQ16769 361 aa17.21■□□□□ 0.35
PTPN20-203ENST00000374342 FAM133BQ5BKY9 247 aaKnown RBP17.21■□□□□ 0.35
PTPN20-203ENST00000374342 RASSF3Q86WH2 238 aa17.21■□□□□ 0.35
PTPN20-203ENST00000374342 ZNF669Q96BR6 464 aaPredicted RBP17.21■□□□□ 0.35
PTPN20-203ENST00000374342 PABPC5Q96DU9 382 aaKnown RBP17.21■□□□□ 0.35
PTPN20-203ENST00000374342 SGSM3Q96HU1 749 aa17.21■□□□□ 0.35
PTPN20-203ENST00000374342 PAIP2Q9BPZ3 127 aaKnown RBP17.21■□□□□ 0.35
PTPN20-203ENST00000374342 TBL1YQ9BQ87 522 aa17.21■□□□□ 0.35
PTPN20-203ENST00000374342 TRPC7Q9HCX4 862 aa17.21■□□□□ 0.35
PTPN20-203ENST00000374342 ZNF334Q9HCZ1 680 aaPredicted RBP17.21■□□□□ 0.35
PTPN20-203ENST00000374342 SLC17A6Q9P2U8 582 aa17.21■□□□□ 0.35
PTPN20-203ENST00000374342 ZNF180Q9UJW8 692 aa17.21■□□□□ 0.35
PTPN20-203ENST00000374342 AAR2Q9Y312 384 aaKnown RBP17.21■□□□□ 0.35
PTPN20-203ENST00000374342 RPS6KL1Q9Y6S9 549 aa17.21■□□□□ 0.35
PTPN20-203ENST00000374342 TRIM49D1C9J1S8 452 aa17.21■□□□□ 0.35
PTPN20-203ENST00000374342 ATP9BO43861 1147 aa17.21■□□□□ 0.35
PTPN20-203ENST00000374342 CACNG3O60359 315 aa17.21■□□□□ 0.35
PTPN20-203ENST00000374342 STC2O76061 302 aa17.21■□□□□ 0.35
PTPN20-203ENST00000374342 OAS1P00973 400 aaKnown RBP17.21■□□□□ 0.35
PTPN20-203ENST00000374342 POLBP06746 335 aa17.21■□□□□ 0.35
PTPN20-203ENST00000374342 LINC00271P0C7V0 271 aa17.21■□□□□ 0.35
PTPN20-203ENST00000374342 HSPA1AP0DMV8 641 aaKnown RBP17.21■□□□□ 0.35
PTPN20-203ENST00000374342 HSPA1BP0DMV9 641 aaKnown RBP17.21■□□□□ 0.35
PTPN20-203ENST00000374342 OR1E1P30953 314 aa17.21■□□□□ 0.35
PTPN20-203ENST00000374342 CORO1AP31146 461 aaKnown RBP17.21■□□□□ 0.35
PTPN20-203ENST00000374342 RPA3P35244 121 aaPredicted RBP17.21■□□□□ 0.35
PTPN20-203ENST00000374342 NUMBP49757 651 aa17.21■□□□□ 0.35
PTPN20-203ENST00000374342 GEMP55040 296 aa17.21■□□□□ 0.35
PTPN20-203ENST00000374342 CDH17Q12864 832 aa17.21■□□□□ 0.35
PTPN20-203ENST00000374342 BMPR2Q13873 1038 aa17.21■□□□□ 0.35
PTPN20-203ENST00000374342 SPANXN3Q5MJ09 141 aa17.21■□□□□ 0.35
PTPN20-203ENST00000374342 CERCAMQ5T4B2 595 aa17.21■□□□□ 0.35
PTPN20-203ENST00000374342 DNAJB7Q7Z6W7 309 aaPredicted RBP17.21■□□□□ 0.35
PTPN20-203ENST00000374342 CPLX4Q7Z7G2 160 aa17.21■□□□□ 0.35
PTPN20-203ENST00000374342 LINC00523Q86TU6 105 aa17.21■□□□□ 0.35
PTPN20-203ENST00000374342 PSMG2Q969U7 264 aa17.21■□□□□ 0.35
PTPN20-203ENST00000374342 ZNF317Q96PQ6 595 aaPredicted RBP17.21■□□□□ 0.35
PTPN20-203ENST00000374342 KLHL5Q96PQ7 755 aa17.21■□□□□ 0.35
PTPN20-203ENST00000374342 FICDQ9BVA6 458 aa17.21■□□□□ 0.35
PTPN20-203ENST00000374342 SSU72Q9NP77 194 aaKnown RBP17.21■□□□□ 0.35
PTPN20-203ENST00000374342 MOCS1Q9NZB8 636 aa17.21■□□□□ 0.35
PTPN20-203ENST00000374342 CXXC1Q9P0U4 656 aaPredicted RBP17.21■□□□□ 0.35
PTPN20-203ENST00000374342 UXTQ9UBK9 157 aaPredicted RBP17.21■□□□□ 0.35
PTPN20-203ENST00000374342 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.2■□□□□ 0.34
PTPN20-203ENST00000374342 TYROBPO43914 113 aa17.2■□□□□ 0.34
PTPN20-203ENST00000374342 KRT37O76014 449 aa17.2■□□□□ 0.34
PTPN20-203ENST00000374342 ALDH1A2O94788 518 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms